BLASTX nr result

ID: Rheum21_contig00028901 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00028901
         (590 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002883251.1| hypothetical protein ARALYDRAFT_342203 [Arab...    62   9e-08
ref|XP_002862843.1| predicted protein [Arabidopsis lyrata subsp....    62   9e-08

>ref|XP_002883251.1| hypothetical protein ARALYDRAFT_342203 [Arabidopsis lyrata subsp.
           lyrata] gi|297329091|gb|EFH59510.1| hypothetical protein
           ARALYDRAFT_342203 [Arabidopsis lyrata subsp. lyrata]
          Length = 518

 Score = 62.4 bits (150), Expect = 9e-08
 Identities = 46/163 (28%), Positives = 71/163 (43%), Gaps = 17/163 (10%)
 Frame = +2

Query: 8   ELNGIYGFSPSGRCKNLDKKEQHAFWRMITGQDKYESQRSKGSTIIHPCLRILCKFFSHT 187
           +L  I+G       K    ++   +W  I G  +Y S + K + + HP +R   +  ++T
Sbjct: 131 DLANIFGLQKGFEMKYSKVQDPQQYWDAIGGTGRYNSGKVKAAQLRHPAVRYAHRVLANT 190

Query: 188 IFARDDAGGGVRNGELLLLWAMLRGV---NVNIGYQLTQKFLSYQD-------------- 316
            FAR      VR  E+ LL+  L G    +V++G  L     SY+               
Sbjct: 191 FFARQFT-NNVRTEEMHLLYTGLEGTTWRDVHMGSVLGHHLASYKQWAKEASTKLKVNVK 249

Query: 317 KDKGVICIGGMITPIASHFHINLNQYTETPAHLWLDRDYLRAC 445
           + K  I IGG+ITPI     INL+++  T     +D  YL  C
Sbjct: 250 RKKPTISIGGIITPILDFVGINLSKHKYTDGVRTIDEFYLYKC 292


>ref|XP_002862843.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297308590|gb|EFH39101.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 550

 Score = 62.4 bits (150), Expect = 9e-08
 Identities = 46/163 (28%), Positives = 71/163 (43%), Gaps = 17/163 (10%)
 Frame = +2

Query: 8   ELNGIYGFSPSGRCKNLDKKEQHAFWRMITGQDKYESQRSKGSTIIHPCLRILCKFFSHT 187
           +L  I+G       K    ++   +W  I G  +Y S + K + + HP +R   +  ++T
Sbjct: 131 DLANIFGLQKGFEMKYSKVQDPQQYWDAIGGTGRYNSGKVKAAQLRHPAVRYAHRVLANT 190

Query: 188 IFARDDAGGGVRNGELLLLWAMLRGV---NVNIGYQLTQKFLSYQD-------------- 316
            FAR      VR  E+ LL+  L G    +V++G  L     SY+               
Sbjct: 191 FFARQFT-NNVRTEEMHLLYTGLEGTTWRDVHMGSVLGHHLASYKQWAKEASTKLKVNVK 249

Query: 317 KDKGVICIGGMITPIASHFHINLNQYTETPAHLWLDRDYLRAC 445
           + K  I IGG+ITPI     INL+++  T     +D  YL  C
Sbjct: 250 RKKPTISIGGIITPILDFVGINLSKHKYTDGVRTIDEFYLYKC 292


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