BLASTX nr result
ID: Rheum21_contig00028746
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00028746
(248 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002322538.2| transcription initiation factor IIF alpha su... 64 2e-08
emb|CBI33123.3| unnamed protein product [Vitis vinifera] 64 3e-08
ref|XP_006380878.1| hypothetical protein POPTR_0006s01070g [Popu... 60 2e-07
ref|XP_002308775.1| transcription initiation factor IIF alpha su... 60 2e-07
gb|ESW26005.1| hypothetical protein PHAVU_003G083500g [Phaseolus... 60 4e-07
ref|XP_004152016.1| PREDICTED: transcription initiation factor I... 60 4e-07
ref|XP_006467340.1| PREDICTED: transcription initiation factor I... 59 9e-07
ref|XP_006449854.1| hypothetical protein CICLE_v10014841mg [Citr... 59 9e-07
gb|EOY28872.1| Transcription activators,DNA binding,RNA polymera... 59 9e-07
gb|EOY28871.1| Transcription activators,DNA binding,RNA polymera... 59 9e-07
gb|EOY28869.1| Transcription activators,DNA binding,RNA polymera... 59 9e-07
ref|XP_004293352.1| PREDICTED: transcription initiation factor I... 59 9e-07
gb|EPS63331.1| hypothetical protein M569_11453, partial [Genlise... 58 1e-06
gb|EXB41552.1| Transcription initiation factor IIF subunit alpha... 58 1e-06
ref|XP_006586768.1| PREDICTED: transcription initiation factor I... 56 6e-06
gb|ESW19654.1| hypothetical protein PHAVU_006G143600g [Phaseolus... 56 6e-06
ref|XP_006352367.1| PREDICTED: transcription initiation factor I... 55 7e-06
ref|XP_006352364.1| PREDICTED: transcription initiation factor I... 55 7e-06
ref|XP_004250258.1| PREDICTED: transcription initiation factor I... 55 7e-06
>ref|XP_002322538.2| transcription initiation factor IIF alpha subunit family protein
[Populus trichocarpa] gi|550320589|gb|EEF04299.2|
transcription initiation factor IIF alpha subunit family
protein [Populus trichocarpa]
Length = 540
Score = 64.3 bits (155), Expect = 2e-08
Identities = 27/30 (90%), Positives = 30/30 (100%)
Frame = +1
Query: 157 MSFDLLLKPSCTGCGSTTDLYGSDCKHLTL 246
MSFDLLLKPSC+GCGSTTDLYGS+CKH+TL
Sbjct: 1 MSFDLLLKPSCSGCGSTTDLYGSNCKHMTL 30
>emb|CBI33123.3| unnamed protein product [Vitis vinifera]
Length = 539
Score = 63.5 bits (153), Expect = 3e-08
Identities = 26/30 (86%), Positives = 30/30 (100%)
Frame = +1
Query: 157 MSFDLLLKPSCTGCGSTTDLYGSDCKHLTL 246
MSFDL+LKPSC+GCGSTTDLYGS+CKH+TL
Sbjct: 1 MSFDLMLKPSCSGCGSTTDLYGSNCKHMTL 30
>ref|XP_006380878.1| hypothetical protein POPTR_0006s01070g [Populus trichocarpa]
gi|550335193|gb|ERP58675.1| hypothetical protein
POPTR_0006s01070g [Populus trichocarpa]
Length = 536
Score = 60.5 bits (145), Expect = 2e-07
Identities = 25/30 (83%), Positives = 29/30 (96%)
Frame = +1
Query: 157 MSFDLLLKPSCTGCGSTTDLYGSDCKHLTL 246
MSFDL L+PSC+GCGSTTDLYGS+CKH+TL
Sbjct: 1 MSFDLQLQPSCSGCGSTTDLYGSNCKHMTL 30
>ref|XP_002308775.1| transcription initiation factor IIF alpha subunit family protein
[Populus trichocarpa] gi|222854751|gb|EEE92298.1|
transcription initiation factor IIF alpha subunit family
protein [Populus trichocarpa]
Length = 541
Score = 60.5 bits (145), Expect = 2e-07
Identities = 25/30 (83%), Positives = 29/30 (96%)
Frame = +1
Query: 157 MSFDLLLKPSCTGCGSTTDLYGSDCKHLTL 246
MSFDL L+PSC+GCGSTTDLYGS+CKH+TL
Sbjct: 1 MSFDLQLQPSCSGCGSTTDLYGSNCKHMTL 30
>gb|ESW26005.1| hypothetical protein PHAVU_003G083500g [Phaseolus vulgaris]
Length = 540
Score = 59.7 bits (143), Expect = 4e-07
Identities = 25/30 (83%), Positives = 28/30 (93%)
Frame = +1
Query: 157 MSFDLLLKPSCTGCGSTTDLYGSDCKHLTL 246
MS DLLLKP+C GCGSTTDLYGS+CKH+TL
Sbjct: 1 MSIDLLLKPTCGGCGSTTDLYGSNCKHMTL 30
>ref|XP_004152016.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
[Cucumis sativus] gi|449517383|ref|XP_004165725.1|
PREDICTED: transcription initiation factor IIF subunit
alpha-like [Cucumis sativus]
Length = 538
Score = 59.7 bits (143), Expect = 4e-07
Identities = 25/30 (83%), Positives = 29/30 (96%)
Frame = +1
Query: 157 MSFDLLLKPSCTGCGSTTDLYGSDCKHLTL 246
MSFDLLLK SC+GCGSTT+LYGS+CKH+TL
Sbjct: 1 MSFDLLLKQSCSGCGSTTELYGSNCKHMTL 30
>ref|XP_006467340.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
isoform X1 [Citrus sinensis]
gi|568825955|ref|XP_006467341.1| PREDICTED:
transcription initiation factor IIF subunit alpha-like
isoform X2 [Citrus sinensis]
Length = 538
Score = 58.5 bits (140), Expect = 9e-07
Identities = 24/30 (80%), Positives = 27/30 (90%)
Frame = +1
Query: 157 MSFDLLLKPSCTGCGSTTDLYGSDCKHLTL 246
MSFDLLLKP C+GCGS DLYGS+CKH+TL
Sbjct: 1 MSFDLLLKPQCSGCGSQADLYGSNCKHMTL 30
>ref|XP_006449854.1| hypothetical protein CICLE_v10014841mg [Citrus clementina]
gi|567915083|ref|XP_006449855.1| hypothetical protein
CICLE_v10014841mg [Citrus clementina]
gi|557552465|gb|ESR63094.1| hypothetical protein
CICLE_v10014841mg [Citrus clementina]
gi|557552466|gb|ESR63095.1| hypothetical protein
CICLE_v10014841mg [Citrus clementina]
Length = 538
Score = 58.5 bits (140), Expect = 9e-07
Identities = 24/30 (80%), Positives = 27/30 (90%)
Frame = +1
Query: 157 MSFDLLLKPSCTGCGSTTDLYGSDCKHLTL 246
MSFDLLLKP C+GCGS DLYGS+CKH+TL
Sbjct: 1 MSFDLLLKPQCSGCGSQVDLYGSNCKHMTL 30
>gb|EOY28872.1| Transcription activators,DNA binding,RNA polymerase II
transcription factors,catalytics,transcription
initiation factors isoform 4 [Theobroma cacao]
Length = 480
Score = 58.5 bits (140), Expect = 9e-07
Identities = 24/30 (80%), Positives = 28/30 (93%)
Frame = +1
Query: 157 MSFDLLLKPSCTGCGSTTDLYGSDCKHLTL 246
MSFDL+LK SC+GCGST DLYGS+CKH+TL
Sbjct: 1 MSFDLMLKSSCSGCGSTVDLYGSNCKHMTL 30
>gb|EOY28871.1| Transcription activators,DNA binding,RNA polymerase II
transcription factors,catalytics,transcription
initiation factors isoform 3 [Theobroma cacao]
Length = 496
Score = 58.5 bits (140), Expect = 9e-07
Identities = 24/30 (80%), Positives = 28/30 (93%)
Frame = +1
Query: 157 MSFDLLLKPSCTGCGSTTDLYGSDCKHLTL 246
MSFDL+LK SC+GCGST DLYGS+CKH+TL
Sbjct: 1 MSFDLMLKSSCSGCGSTVDLYGSNCKHMTL 30
>gb|EOY28869.1| Transcription activators,DNA binding,RNA polymerase II
transcription factors,catalytics,transcription
initiation factors isoform 1 [Theobroma cacao]
Length = 549
Score = 58.5 bits (140), Expect = 9e-07
Identities = 24/30 (80%), Positives = 28/30 (93%)
Frame = +1
Query: 157 MSFDLLLKPSCTGCGSTTDLYGSDCKHLTL 246
MSFDL+LK SC+GCGST DLYGS+CKH+TL
Sbjct: 1 MSFDLMLKSSCSGCGSTVDLYGSNCKHMTL 30
>ref|XP_004293352.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
[Fragaria vesca subsp. vesca]
Length = 550
Score = 58.5 bits (140), Expect = 9e-07
Identities = 25/30 (83%), Positives = 28/30 (93%)
Frame = +1
Query: 157 MSFDLLLKPSCTGCGSTTDLYGSDCKHLTL 246
MS DLLLKPSC GCGST+DLYGS+CKH+TL
Sbjct: 1 MSSDLLLKPSCGGCGSTSDLYGSNCKHMTL 30
>gb|EPS63331.1| hypothetical protein M569_11453, partial [Genlisea aurea]
Length = 371
Score = 58.2 bits (139), Expect = 1e-06
Identities = 25/32 (78%), Positives = 27/32 (84%)
Frame = +1
Query: 151 ENMSFDLLLKPSCTGCGSTTDLYGSDCKHLTL 246
E MS DL+LKPSC GCGS T+LYGS CKHLTL
Sbjct: 4 EKMSIDLILKPSCGGCGSMTELYGSTCKHLTL 35
>gb|EXB41552.1| Transcription initiation factor IIF subunit alpha [Morus notabilis]
Length = 483
Score = 57.8 bits (138), Expect = 1e-06
Identities = 23/30 (76%), Positives = 28/30 (93%)
Frame = +1
Query: 157 MSFDLLLKPSCTGCGSTTDLYGSDCKHLTL 246
MS DL+LKPSC+GCGS +DLYGS+CKH+TL
Sbjct: 1 MSMDLILKPSCSGCGSASDLYGSNCKHMTL 30
>ref|XP_006586768.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
[Glycine max]
Length = 536
Score = 55.8 bits (133), Expect = 6e-06
Identities = 24/30 (80%), Positives = 27/30 (90%)
Frame = +1
Query: 157 MSFDLLLKPSCTGCGSTTDLYGSDCKHLTL 246
MS DL LK SC+GCGSTTDLYGS+CKH+TL
Sbjct: 1 MSTDLQLKSSCSGCGSTTDLYGSNCKHMTL 30
>gb|ESW19654.1| hypothetical protein PHAVU_006G143600g [Phaseolus vulgaris]
Length = 540
Score = 55.8 bits (133), Expect = 6e-06
Identities = 24/30 (80%), Positives = 27/30 (90%)
Frame = +1
Query: 157 MSFDLLLKPSCTGCGSTTDLYGSDCKHLTL 246
MS DL LK SC+GCGSTTDLYGS+CKH+TL
Sbjct: 1 MSTDLQLKSSCSGCGSTTDLYGSNCKHMTL 30
>ref|XP_006352367.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
isoform X4 [Solanum tuberosum]
Length = 535
Score = 55.5 bits (132), Expect = 7e-06
Identities = 23/30 (76%), Positives = 27/30 (90%)
Frame = +1
Query: 157 MSFDLLLKPSCTGCGSTTDLYGSDCKHLTL 246
MS DL+LKPSC+ CGS++DLYGS CKHLTL
Sbjct: 1 MSIDLILKPSCSRCGSSSDLYGSSCKHLTL 30
>ref|XP_006352364.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
isoform X1 [Solanum tuberosum]
gi|565371548|ref|XP_006352365.1| PREDICTED:
transcription initiation factor IIF subunit alpha-like
isoform X2 [Solanum tuberosum]
gi|565371550|ref|XP_006352366.1| PREDICTED:
transcription initiation factor IIF subunit alpha-like
isoform X3 [Solanum tuberosum]
Length = 538
Score = 55.5 bits (132), Expect = 7e-06
Identities = 23/30 (76%), Positives = 27/30 (90%)
Frame = +1
Query: 157 MSFDLLLKPSCTGCGSTTDLYGSDCKHLTL 246
MS DL+LKPSC+ CGS++DLYGS CKHLTL
Sbjct: 1 MSIDLILKPSCSRCGSSSDLYGSSCKHLTL 30
>ref|XP_004250258.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
[Solanum lycopersicum]
Length = 534
Score = 55.5 bits (132), Expect = 7e-06
Identities = 23/30 (76%), Positives = 27/30 (90%)
Frame = +1
Query: 157 MSFDLLLKPSCTGCGSTTDLYGSDCKHLTL 246
MS DL+LKPSC+ CGS++DLYGS CKHLTL
Sbjct: 1 MSIDLILKPSCSRCGSSSDLYGSSCKHLTL 30