BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00028712
         (327 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG28895.1|AC008113_11 F12A21.24 [Arabidopsis thaliana]             70   4e-10
gb|ABE65462.1| hypothetical protein At2g27870 [Arabidopsis thali...    69   7e-10
gb|ABK28199.1| unknown [Arabidopsis thaliana]                          69   9e-10
gb|AAD21515.1| putative reverse transcriptase [Arabidopsis thali...    69   9e-10
gb|AAF19536.1|AC007190_4 F23N19.5 [Arabidopsis thaliana]               66   6e-09
gb|AAF79490.1|AC022492_34 F1L3.4 [Arabidopsis thaliana]                66   6e-09
gb|AAF97302.1|AC007843_5 Hypothetical protein [Arabidopsis thali...    66   6e-09
dbj|BAB09815.1| non-LTR retroelement reverse transcriptase-like ...    64   3e-08
gb|AAD49762.2|AC007932_10 F11A17.8 [Arabidopsis thaliana]              63   5e-08
gb|AAC67202.1| hypothetical protein [Arabidopsis thaliana]             62   6e-08
gb|AAF23831.1|AC007234_3 F1E22.12 [Arabidopsis thaliana]               62   8e-08
sp|P0C2F6.1|RNHX1_ARATH RecName: Full=Putative ribonuclease H pr...    62   8e-08
gb|AAD22368.1| putative non-LTR retroelement reverse transcripta...    62   8e-08
gb|AAG12669.1|AC027033_4 hypothetical protein; 81517-79153 [Arab...    62   1e-07
gb|AAC26674.1| putative non-LTR retroelement reverse transcripta...    62   1e-07
gb|AAC63844.1| putative non-LTR retroelement reverse transcripta...    61   2e-07
emb|CAB10336.1| splicing factor like protein [Arabidopsis thalia...    60   2e-07
gb|ABW81036.1| unknown [Arabidopsis lyrata subsp. lyrata]              60   3e-07
gb|ABW81175.1| non-LTR retrotransposon transposase [Arabidopsis ...    60   4e-07
gb|EMJ22168.1| hypothetical protein PRUPE_ppb022841mg, partial [...    59   9e-07

>gb|AAG28895.1|AC008113_11 F12A21.24 [Arabidopsis thaliana]
          Length = 803

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 35/76 (46%), Positives = 48/76 (63%)
 Frame = -2

Query: 320 RVCLETYSRLAILFLSKPMDRCHPFFSLVFLAHDLIRRNWCIQLCHIHKEANCLADGLAS 141
           RV LE  S L + FL   +   HP   LV L H L+ ++W +++ H+++EAN LADGLA+
Sbjct: 706 RVELEVDSELVVGFLKTGIGDQHPLSFLVRLCHGLLSKDWIVRITHVYREANRLADGLAN 765

Query: 140 LAFSFPVDFHVLGDPP 93
            AFS P+ FH L D P
Sbjct: 766 YAFSLPLGFHSLIDVP 781


>gb|ABE65462.1| hypothetical protein At2g27870 [Arabidopsis thaliana]
          Length = 314

 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 33/76 (43%), Positives = 48/76 (63%)
 Frame = -2

Query: 320 RVCLETYSRLAILFLSKPMDRCHPFFSLVFLAHDLIRRNWCIQLCHIHKEANCLADGLAS 141
           R+ +E  S + + FL   ++  HP   LV L HD I R+W +++ H+++EAN LADGLA+
Sbjct: 217 RLEIEVDSEIVVGFLKIXINEVHPLSFLVRLCHDFISRDWRVRISHVYREANRLADGLAN 276

Query: 140 LAFSFPVDFHVLGDPP 93
            AFS P+ FH L   P
Sbjct: 277 YAFSLPLGFHSLSLVP 292


>gb|ABK28199.1| unknown [Arabidopsis thaliana]
          Length = 315

 Score = 68.6 bits (166), Expect = 9e-10
 Identities = 33/76 (43%), Positives = 48/76 (63%)
 Frame = -2

Query: 320 RVCLETYSRLAILFLSKPMDRCHPFFSLVFLAHDLIRRNWCIQLCHIHKEANCLADGLAS 141
           R+ +E  S + + FL   ++  HP   LV L HD I R+W +++ H+++EAN LADGLA+
Sbjct: 217 RLEIEVDSEIVVGFLKIGINEVHPLSFLVRLCHDFISRDWRVRISHVYREANRLADGLAN 276

Query: 140 LAFSFPVDFHVLGDPP 93
            AFS P+ FH L   P
Sbjct: 277 YAFSLPLGFHSLSLVP 292


>gb|AAD21515.1| putative reverse transcriptase [Arabidopsis thaliana]
           gi|20197456|gb|AAM15081.1| putative reverse
           transcriptase [Arabidopsis thaliana]
          Length = 314

 Score = 68.6 bits (166), Expect = 9e-10
 Identities = 33/76 (43%), Positives = 48/76 (63%)
 Frame = -2

Query: 320 RVCLETYSRLAILFLSKPMDRCHPFFSLVFLAHDLIRRNWCIQLCHIHKEANCLADGLAS 141
           R+ +E  S + + FL   ++  HP   LV L HD I R+W +++ H+++EAN LADGLA+
Sbjct: 217 RLEIEVDSEIVVGFLKIGINEVHPLSFLVRLCHDFISRDWRVRISHVYREANRLADGLAN 276

Query: 140 LAFSFPVDFHVLGDPP 93
            AFS P+ FH L   P
Sbjct: 277 YAFSLPLGFHSLSLVP 292


>gb|AAF19536.1|AC007190_4 F23N19.5 [Arabidopsis thaliana]
          Length = 233

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 29/76 (38%), Positives = 45/76 (59%)
 Frame = -2

Query: 320 RVCLETYSRLAILFLSKPMDRCHPFFSLVFLAHDLIRRNWCIQLCHIHKEANCLADGLAS 141
           R+ LE  S + + FL   +   HP   LV + H  + R+W +++ H+++EAN LADGLA+
Sbjct: 136 RLELEVDSEMVVGFLRTGIGSSHPLSFLVRMCHGFLSRDWIVRIGHVYREANRLADGLAN 195

Query: 140 LAFSFPVDFHVLGDPP 93
            AF  P+ +H    PP
Sbjct: 196 YAFDLPLGYHAFASPP 211


>gb|AAF79490.1|AC022492_34 F1L3.4 [Arabidopsis thaliana]
          Length = 253

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 29/73 (39%), Positives = 45/73 (61%)
 Frame = -2

Query: 311 LETYSRLAILFLSKPMDRCHPFFSLVFLAHDLIRRNWCIQLCHIHKEANCLADGLASLAF 132
           +E  S + + FL   +D  HP   LV L H L+ ++W +++ H+++EAN LADGLA+ AF
Sbjct: 159 MEIDSEMVVGFLRTGIDDSHPLSFLVRLCHGLLSKDWSVRISHVYREANRLADGLANYAF 218

Query: 131 SFPVDFHVLGDPP 93
             P+ FH+    P
Sbjct: 219 FLPLGFHLFNSTP 231


>gb|AAF97302.1|AC007843_5 Hypothetical protein [Arabidopsis thaliana]
           gi|55978717|gb|AAV68820.1| hypothetical protein
           AT1G17390 [Arabidopsis thaliana]
          Length = 272

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 29/73 (39%), Positives = 45/73 (61%)
 Frame = -2

Query: 311 LETYSRLAILFLSKPMDRCHPFFSLVFLAHDLIRRNWCIQLCHIHKEANCLADGLASLAF 132
           +E  S + + FL   +D  HP   LV L H L+ ++W +++ H+++EAN LADGLA+ AF
Sbjct: 178 MEIDSEMVVGFLRTGIDDSHPLSFLVRLCHGLLSKDWSVRISHVYREANRLADGLANYAF 237

Query: 131 SFPVDFHVLGDPP 93
             P+ FH+    P
Sbjct: 238 FLPLGFHLFNSTP 250


>dbj|BAB09815.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
           thaliana]
          Length = 676

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 32/76 (42%), Positives = 45/76 (59%)
 Frame = -2

Query: 320 RVCLETYSRLAILFLSKPMDRCHPFFSLVFLAHDLIRRNWCIQLCHIHKEANCLADGLAS 141
           RV LE  S L + FL   +   HP   LV L H  I ++W +++ H+++EAN LADGLA+
Sbjct: 579 RVRLEVDSALVVGFLQSGIGDSHPLAFLVRLCHGFISKDWIVRITHVYREANRLADGLAN 638

Query: 140 LAFSFPVDFHVLGDPP 93
            AF+ P  F +L   P
Sbjct: 639 YAFTLPFGFLLLDSCP 654


>gb|AAD49762.2|AC007932_10 F11A17.8 [Arabidopsis thaliana]
          Length = 803

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 29/70 (41%), Positives = 43/70 (61%)
 Frame = -2

Query: 320 RVCLETYSRLAILFLSKPMDRCHPFFSLVFLAHDLIRRNWCIQLCHIHKEANCLADGLAS 141
           RV +E  S L +  L+  +   +P   LV L H  I R+W +++ H+++EAN LADGLA+
Sbjct: 9   RVVIEVDSELVVGLLTTGISEANPLSFLVRLCHGFILRDWIVRIVHVYREANRLADGLAN 68

Query: 140 LAFSFPVDFH 111
             FS P+ FH
Sbjct: 69  YVFSLPLGFH 78


>gb|AAC67202.1| hypothetical protein [Arabidopsis thaliana]
          Length = 117

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 29/73 (39%), Positives = 44/73 (60%)
 Frame = -2

Query: 311 LETYSRLAILFLSKPMDRCHPFFSLVFLAHDLIRRNWCIQLCHIHKEANCLADGLASLAF 132
           LE  S L + FL   +   HP   LV L + L+ ++W +++ H+++EAN LADGLA+ AF
Sbjct: 23  LEIDSALVVDFLKTGISETHPLSFLVRLCYGLLSKDWLVRISHVYREANQLADGLANYAF 82

Query: 131 SFPVDFHVLGDPP 93
           S P+  H+    P
Sbjct: 83  SLPLGLHLFDSCP 95


>gb|AAF23831.1|AC007234_3 F1E22.12 [Arabidopsis thaliana]
          Length = 1055

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 29/70 (41%), Positives = 44/70 (62%)
 Frame = -2

Query: 320 RVCLETYSRLAILFLSKPMDRCHPFFSLVFLAHDLIRRNWCIQLCHIHKEANCLADGLAS 141
           RV LE  S + + FL   +   HP   LV L H  ++++W +++ H+++EAN LADGLA+
Sbjct: 632 RVELEVDSEVIVGFLKTGISDSHPLSFLVRLCHGFLQKDWLVRIVHVYREANRLADGLAN 691

Query: 140 LAFSFPVDFH 111
            AFS  + FH
Sbjct: 692 YAFSLSLGFH 701


>sp|P0C2F6.1|RNHX1_ARATH RecName: Full=Putative ribonuclease H protein At1g65750
          Length = 620

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 29/70 (41%), Positives = 44/70 (62%)
 Frame = -2

Query: 320 RVCLETYSRLAILFLSKPMDRCHPFFSLVFLAHDLIRRNWCIQLCHIHKEANCLADGLAS 141
           RV LE  S + + FL   +   HP   LV L H  ++++W +++ H+++EAN LADGLA+
Sbjct: 523 RVELEVDSEVIVGFLKTGISDSHPLSFLVRLCHGFLQKDWLVRIVHVYREANRLADGLAN 582

Query: 140 LAFSFPVDFH 111
            AFS  + FH
Sbjct: 583 YAFSLSLGFH 592


>gb|AAD22368.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 321

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 29/76 (38%), Positives = 47/76 (61%)
 Frame = -2

Query: 320 RVCLETYSRLAILFLSKPMDRCHPFFSLVFLAHDLIRRNWCIQLCHIHKEANCLADGLAS 141
           RV LE  S++ + FL+  +   HP   L+ L +D + + W +++ H+++EAN LADGLA+
Sbjct: 224 RVELEVDSKMVVGFLTTGIADSHPLSFLLRLCYDFLSKGWIVRISHVYREANRLADGLAN 283

Query: 140 LAFSFPVDFHVLGDPP 93
            AFS  +  H+L   P
Sbjct: 284 YAFSLSLGLHLLESRP 299


>gb|AAG12669.1|AC027033_4 hypothetical protein; 81517-79153 [Arabidopsis thaliana]
          Length = 256

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 29/76 (38%), Positives = 44/76 (57%)
 Frame = -2

Query: 320 RVCLETYSRLAILFLSKPMDRCHPFFSLVFLAHDLIRRNWCIQLCHIHKEANCLADGLAS 141
           RV LE  S + + FL   +   HP   L  L +  I ++W +++ H+++EAN LADGLA+
Sbjct: 78  RVELEVDSEIVVGFLKTGIGDSHPLSFLARLCYGFISKDWIVRISHVYREANRLADGLAN 137

Query: 140 LAFSFPVDFHVLGDPP 93
            AF+ P+ FH     P
Sbjct: 138 YAFTLPLGFHFFHSSP 153


>gb|AAC26674.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 970

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 30/70 (42%), Positives = 42/70 (60%)
 Frame = -2

Query: 320  RVCLETYSRLAILFLSKPMDRCHPFFSLVFLAHDLIRRNWCIQLCHIHKEANCLADGLAS 141
            RV L   S L + FLS  + + HP   LV L      R+W +++ H+++EAN LADGLA+
Sbjct: 873  RVELNLDSELVVGFLSTGISKAHPLSFLVRLCQGFFTRDWLVRVSHVYREANRLADGLAN 932

Query: 140  LAFSFPVDFH 111
             AF  P+ FH
Sbjct: 933  YAFFLPLGFH 942


>gb|AAC63844.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1231

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 30/78 (38%), Positives = 44/78 (56%)
 Frame = -2

Query: 320  RVCLETYSRLAILFLSKPMDRCHPFFSLVFLAHDLIRRNWCIQLCHIHKEANCLADGLAS 141
            RV L+   +L + FLS  +   HP   LV L      R+W +++ H+++EAN LADGLA+
Sbjct: 1134 RVELDLDCKLVVGFLSTGVSNAHPLSFLVRLCQGFFTRDWLVRVSHVYREANRLADGLAN 1193

Query: 140  LAFSFPVDFHVLGDPPMG 87
             AF+ P+  H     P G
Sbjct: 1194 YAFTLPLGLHCFDACPEG 1211


>emb|CAB10336.1| splicing factor like protein [Arabidopsis thaliana]
           gi|7268306|emb|CAB78600.1| splicing factor like protein
           [Arabidopsis thaliana]
          Length = 559

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 29/64 (45%), Positives = 41/64 (64%)
 Frame = -2

Query: 320 RVCLETYSRLAILFLSKPMDRCHPFFSLVFLAHDLIRRNWCIQLCHIHKEANCLADGLAS 141
           RV LE  S L + FL   +   HP   LV L H L+ ++W +++ H+++EAN LADGLA+
Sbjct: 85  RVELEVDSELVVGFLQSGISEAHPLAFLVRLCHGLLSKDWLVRVSHVYREANRLADGLAN 144

Query: 140 LAFS 129
            AFS
Sbjct: 145 YAFS 148


>gb|ABW81036.1| unknown [Arabidopsis lyrata subsp. lyrata]
          Length = 172

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 28/70 (40%), Positives = 43/70 (61%)
 Frame = -2

Query: 320 RVCLETYSRLAILFLSKPMDRCHPFFSLVFLAHDLIRRNWCIQLCHIHKEANCLADGLAS 141
           R+ LE  S L + FL+  +   HP   LV L +  I R+W +++ H++++AN  ADGLA+
Sbjct: 75  RLVLEVDSSLVVGFLTTGIGDSHPLSILVRLCYGFIARDWIVRVTHVYRKANRFADGLAN 134

Query: 140 LAFSFPVDFH 111
             FS P+ FH
Sbjct: 135 YVFSLPLGFH 144


>gb|ABW81175.1| non-LTR retrotransposon transposase [Arabidopsis cebennensis]
          Length = 799

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 29/70 (41%), Positives = 44/70 (62%)
 Frame = -2

Query: 320 RVCLETYSRLAILFLSKPMDRCHPFFSLVFLAHDLIRRNWCIQLCHIHKEANCLADGLAS 141
           R+ +E  S L + FL+  +   HP   LV L +  I R+W +++ H+++EAN LADGLA+
Sbjct: 697 RLEVEVDSELVVGFLTTWISDSHPLSFLVRLCYGFISRDWIVRISHVYREANRLADGLAN 756

Query: 140 LAFSFPVDFH 111
            A S P+ FH
Sbjct: 757 YASSLPLGFH 766


>gb|EMJ22168.1| hypothetical protein PRUPE_ppb022841mg, partial [Prunus persica]
          Length = 173

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 26/73 (35%), Positives = 41/73 (56%)
 Frame = -2

Query: 311 LETYSRLAILFLSKPMDRCHPFFSLVFLAHDLIRRNWCIQLCHIHKEANCLADGLASLAF 132
           +E  S+ A++ L  P    HP FS++   + LI++ WC  + HI +  N +AD LAS++ 
Sbjct: 79  VECDSKSAVVMLQNPTSPTHPLFSIINCCYLLIQKEWCCSIKHIFRGHNFVADSLASMSH 138

Query: 131 SFPVDFHVLGDPP 93
             P+  HVL   P
Sbjct: 139 DLPLGLHVLDSTP 151