BLASTX nr result

ID: Rheum21_contig00028704 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00028704
         (292 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281228.1| PREDICTED: RNA-binding protein 8A [Vitis vin...   115   5e-24
ref|XP_002513523.1| polyadenylate-binding protein, putative [Ric...   110   1e-22
ref|XP_004139049.1| PREDICTED: RNA-binding protein 8A-like [Cucu...   105   5e-21
ref|XP_002299789.1| hypothetical protein POPTR_0001s26260g [Popu...   105   6e-21
ref|XP_006470660.1| PREDICTED: RNA-binding protein 8A-like [Citr...   104   1e-20
ref|XP_006446175.1| hypothetical protein CICLE_v10016808mg [Citr...   103   2e-20
gb|EXB93336.1| RNA-binding protein 8A [Morus notabilis]               103   2e-20
ref|XP_006353634.1| PREDICTED: RNA-binding protein 8A-like [Sola...   103   3e-20
ref|XP_006379064.1| hypothetical protein POPTR_0009s05550g [Popu...   103   3e-20
ref|XP_002314085.2| hypothetical protein POPTR_0009s05550g [Popu...   103   3e-20
ref|XP_004241818.1| PREDICTED: RNA-binding protein 8A-like [Sola...   103   3e-20
gb|ABK96138.1| unknown [Populus trichocarpa]                          103   3e-20
emb|CAC85245.1| salt tolerance protein 4 [Beta vulgaris]              103   3e-20
gb|ESW28985.1| hypothetical protein PHAVU_002G034400g [Phaseolus...   102   5e-20
gb|AFL91695.1| RNA binding protein [Raphanus sativus var. raphan...   102   7e-20
gb|EOY32841.1| RNA-binding family protein [Theobroma cacao]           100   2e-19
ref|XP_003517521.1| PREDICTED: RNA-binding protein 8A-like [Glyc...   100   2e-19
ref|NP_001236162.1| uncharacterized protein LOC100527187 [Glycin...   100   3e-19
ref|XP_004511500.1| PREDICTED: RNA-binding protein 8A-like [Cice...    99   6e-19
ref|NP_001274809.1| uncharacterized protein LOC102577678 [Solanu...    99   6e-19

>ref|XP_002281228.1| PREDICTED: RNA-binding protein 8A [Vitis vinifera]
           gi|296088561|emb|CBI37552.3| unnamed protein product
           [Vitis vinifera]
          Length = 202

 Score =  115 bits (289), Expect = 5e-24
 Identities = 62/101 (61%), Positives = 73/101 (72%), Gaps = 5/101 (4%)
 Frame = -3

Query: 290 DDLMDEEGAAD--DASPRAPLPKIKSAISGGSDGT---ALRKTKXXXXXXXXXXXXXXXX 126
           DDLMDE+GA D  ++SPRAPLPK+KSAI+GG+  +   A +KTK                
Sbjct: 16  DDLMDEDGAVDVDNSSPRAPLPKLKSAITGGAPSSLAAAPKKTKGRGFRDDTDADRNSRF 75

Query: 125 XXRDFDTLDSEGGPGPQRSIEGWIVLVTGVHEEAGEDDLQN 3
             RDFD+LDS+GGPGPQRSIEGWI+LVTGVHEEA EDDLQN
Sbjct: 76  AARDFDSLDSDGGPGPQRSIEGWIILVTGVHEEAQEDDLQN 116


>ref|XP_002513523.1| polyadenylate-binding protein, putative [Ricinus communis]
           gi|223547431|gb|EEF48926.1| polyadenylate-binding
           protein, putative [Ricinus communis]
          Length = 199

 Score =  110 bits (276), Expect = 1e-22
 Identities = 63/100 (63%), Positives = 71/100 (71%), Gaps = 4/100 (4%)
 Frame = -3

Query: 290 DDLMDEEGAAD-DASPRAPLPKIKSAISGG--SDGTALRKTKXXXXXXXXXXXXXXXXXX 120
           DDLMDE+G  D DASPRAPLPK+KSAI+GG  S  +A RKTK                  
Sbjct: 16  DDLMDEDGGVDADASPRAPLPKLKSAITGGAASSLSAPRKTKGRGFREEADADRQTRLAS 75

Query: 119 R-DFDTLDSEGGPGPQRSIEGWIVLVTGVHEEAGEDDLQN 3
           R DFD+L ++GGPGPQRSIEGWI+LVTGVHEEA EDDLQN
Sbjct: 76  RGDFDSLGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQN 115


>ref|XP_004139049.1| PREDICTED: RNA-binding protein 8A-like [Cucumis sativus]
          Length = 197

 Score =  105 bits (263), Expect = 5e-21
 Identities = 59/100 (59%), Positives = 68/100 (68%), Gaps = 4/100 (4%)
 Frame = -3

Query: 290 DDLMDEEGAAD-DASPRAPLPKIKSAISGGSDGTAL---RKTKXXXXXXXXXXXXXXXXX 123
           DDLMDE+GAA+ DASPRAP PK+KSAI+GG+  +     +KTK                 
Sbjct: 16  DDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLSGGPKKTKGRGFREESDRNTRLAGS 75

Query: 122 XRDFDTLDSEGGPGPQRSIEGWIVLVTGVHEEAGEDDLQN 3
             DFD+L S  GPGPQRSIEGWI+LVTGVHEEA EDDLQN
Sbjct: 76  --DFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQN 113


>ref|XP_002299789.1| hypothetical protein POPTR_0001s26260g [Populus trichocarpa]
           gi|118484267|gb|ABK94013.1| unknown [Populus
           trichocarpa] gi|222847047|gb|EEE84594.1| hypothetical
           protein POPTR_0001s26260g [Populus trichocarpa]
          Length = 205

 Score =  105 bits (262), Expect = 6e-21
 Identities = 57/101 (56%), Positives = 70/101 (69%), Gaps = 6/101 (5%)
 Frame = -3

Query: 290 DDLMDEEGAAD---DASPRAPLPKIKSAISGGSDGTAL---RKTKXXXXXXXXXXXXXXX 129
           DDLMDE+GAAD    +SPRAPLPK+KSAI+GGS  ++L   +KTK               
Sbjct: 16  DDLMDEDGAADADASSSPRAPLPKLKSAITGGSASSSLSAPKKTKGRGFREEVDAERQSR 75

Query: 128 XXXRDFDTLDSEGGPGPQRSIEGWIVLVTGVHEEAGEDDLQ 6
              R FD+L S+GGPGPQRS+EGWI+LV+GVHEEA +D LQ
Sbjct: 76  LSGRGFDSLGSDGGPGPQRSVEGWIILVSGVHEEAQDDHLQ 116


>ref|XP_006470660.1| PREDICTED: RNA-binding protein 8A-like [Citrus sinensis]
          Length = 196

 Score =  104 bits (260), Expect = 1e-20
 Identities = 57/99 (57%), Positives = 68/99 (68%), Gaps = 3/99 (3%)
 Frame = -3

Query: 290 DDLMDEEGAAD---DASPRAPLPKIKSAISGGSDGTALRKTKXXXXXXXXXXXXXXXXXX 120
           DDLMDE+G AD    +SPRAP PK+KSAI+GG    A +KTK                  
Sbjct: 14  DDLMDEDGTADVDASSSPRAPQPKLKSAITGG----APKKTKGRGFREEADSERHSRLAD 69

Query: 119 RDFDTLDSEGGPGPQRSIEGWIVLVTGVHEEAGEDDLQN 3
           R+F++L ++GGPGPQRSIEGWI+LVTGVHEEA EDDLQN
Sbjct: 70  RNFESLGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQN 108


>ref|XP_006446175.1| hypothetical protein CICLE_v10016808mg [Citrus clementina]
           gi|557548786|gb|ESR59415.1| hypothetical protein
           CICLE_v10016808mg [Citrus clementina]
          Length = 196

 Score =  103 bits (258), Expect = 2e-20
 Identities = 57/99 (57%), Positives = 67/99 (67%), Gaps = 3/99 (3%)
 Frame = -3

Query: 290 DDLMDEEGAAD---DASPRAPLPKIKSAISGGSDGTALRKTKXXXXXXXXXXXXXXXXXX 120
           DDLMDE+G AD    +SPRAP PK+KSAI+GG    A +KTK                  
Sbjct: 14  DDLMDEDGTADVDASSSPRAPQPKLKSAITGG----APKKTKGRGFREEADSERHSRLAD 69

Query: 119 RDFDTLDSEGGPGPQRSIEGWIVLVTGVHEEAGEDDLQN 3
           R F++L ++GGPGPQRSIEGWI+LVTGVHEEA EDDLQN
Sbjct: 70  RHFESLGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQN 108


>gb|EXB93336.1| RNA-binding protein 8A [Morus notabilis]
          Length = 193

 Score =  103 bits (257), Expect = 2e-20
 Identities = 58/102 (56%), Positives = 66/102 (64%), Gaps = 6/102 (5%)
 Frame = -3

Query: 290 DDLMDEEGAAD---DASPRAPLPKIKSAISGGSDGTAL---RKTKXXXXXXXXXXXXXXX 129
           DDLMDE+GA D    ASPRAPLPK+KSAI+GG   ++L   +KTK               
Sbjct: 16  DDLMDEDGAPDADASASPRAPLPKLKSAITGGGASSSLLPQKKTKGRGFREDPNADRNSR 75

Query: 128 XXXRDFDTLDSEGGPGPQRSIEGWIVLVTGVHEEAGEDDLQN 3
               DFD+L S  G  PQRSIEGWI+LVTGVHEEA EDDLQN
Sbjct: 76  LTGADFDSLKSSDGLEPQRSIEGWIILVTGVHEEAQEDDLQN 117


>ref|XP_006353634.1| PREDICTED: RNA-binding protein 8A-like [Solanum tuberosum]
          Length = 195

 Score =  103 bits (256), Expect = 3e-20
 Identities = 55/97 (56%), Positives = 66/97 (68%), Gaps = 1/97 (1%)
 Frame = -3

Query: 290 DDLMDEEGAADDASPRAPLPKIKSAISGGSDGT-ALRKTKXXXXXXXXXXXXXXXXXXRD 114
           DDLMDE+   D +SPRAP+PK+KSAI+GG  G+ A +K K                    
Sbjct: 15  DDLMDED--VDASSPRAPMPKLKSAITGGGGGSSASKKIKGRGFREETAEAERNARLSAR 72

Query: 113 FDTLDSEGGPGPQRSIEGWIVLVTGVHEEAGEDDLQN 3
           FD+LDSEGGPGP+RSIEGWI+LVTGV+EEA EDDL N
Sbjct: 73  FDSLDSEGGPGPERSIEGWIILVTGVNEEAQEDDLHN 109


>ref|XP_006379064.1| hypothetical protein POPTR_0009s05550g [Populus trichocarpa]
           gi|550331096|gb|ERP56861.1| hypothetical protein
           POPTR_0009s05550g [Populus trichocarpa]
          Length = 205

 Score =  103 bits (256), Expect = 3e-20
 Identities = 56/101 (55%), Positives = 68/101 (67%), Gaps = 6/101 (5%)
 Frame = -3

Query: 290 DDLMDEEGAAD---DASPRAPLPKIKSAISGGSDGTAL---RKTKXXXXXXXXXXXXXXX 129
           DDLMDE+GA D    +SPRAPLPK+KSAI+GGS   +L   +KTK               
Sbjct: 16  DDLMDEDGAVDVDASSSPRAPLPKLKSAITGGSASPSLSAPKKTKGRGFREEVDTERQSR 75

Query: 128 XXXRDFDTLDSEGGPGPQRSIEGWIVLVTGVHEEAGEDDLQ 6
              R FD+L S+GGPGPQRS+EGWI+LV+GVHEEA +D LQ
Sbjct: 76  FSGRGFDSLGSDGGPGPQRSVEGWIILVSGVHEEAQDDHLQ 116


>ref|XP_002314085.2| hypothetical protein POPTR_0009s05550g [Populus trichocarpa]
           gi|550331095|gb|EEE88040.2| hypothetical protein
           POPTR_0009s05550g [Populus trichocarpa]
          Length = 211

 Score =  103 bits (256), Expect = 3e-20
 Identities = 56/101 (55%), Positives = 68/101 (67%), Gaps = 6/101 (5%)
 Frame = -3

Query: 290 DDLMDEEGAAD---DASPRAPLPKIKSAISGGSDGTAL---RKTKXXXXXXXXXXXXXXX 129
           DDLMDE+GA D    +SPRAPLPK+KSAI+GGS   +L   +KTK               
Sbjct: 16  DDLMDEDGAVDVDASSSPRAPLPKLKSAITGGSASPSLSAPKKTKGRGFREEVDTERQSR 75

Query: 128 XXXRDFDTLDSEGGPGPQRSIEGWIVLVTGVHEEAGEDDLQ 6
              R FD+L S+GGPGPQRS+EGWI+LV+GVHEEA +D LQ
Sbjct: 76  FSGRGFDSLGSDGGPGPQRSVEGWIILVSGVHEEAQDDHLQ 116


>ref|XP_004241818.1| PREDICTED: RNA-binding protein 8A-like [Solanum lycopersicum]
          Length = 195

 Score =  103 bits (256), Expect = 3e-20
 Identities = 55/97 (56%), Positives = 66/97 (68%), Gaps = 1/97 (1%)
 Frame = -3

Query: 290 DDLMDEEGAADDASPRAPLPKIKSAISGGSDGT-ALRKTKXXXXXXXXXXXXXXXXXXRD 114
           DDLMDE+   D +SPRAP+PK+KSAI+GG  G+ A +K K                    
Sbjct: 15  DDLMDED--VDASSPRAPMPKLKSAITGGGGGSSASKKIKGRGFREETAEAERNARLSAR 72

Query: 113 FDTLDSEGGPGPQRSIEGWIVLVTGVHEEAGEDDLQN 3
           FD+LDSEGGPGP+RSIEGWI+LVTGV+EEA EDDL N
Sbjct: 73  FDSLDSEGGPGPERSIEGWIILVTGVNEEAHEDDLHN 109


>gb|ABK96138.1| unknown [Populus trichocarpa]
          Length = 205

 Score =  103 bits (256), Expect = 3e-20
 Identities = 56/101 (55%), Positives = 68/101 (67%), Gaps = 6/101 (5%)
 Frame = -3

Query: 290 DDLMDEEGAAD---DASPRAPLPKIKSAISGGSDGTAL---RKTKXXXXXXXXXXXXXXX 129
           DDLMDE+GA D    +SPRAPLPK+KSAI+GGS   +L   +KTK               
Sbjct: 16  DDLMDEDGAVDVDASSSPRAPLPKLKSAITGGSASPSLSAPKKTKGRGFREEVDTERQSR 75

Query: 128 XXXRDFDTLDSEGGPGPQRSIEGWIVLVTGVHEEAGEDDLQ 6
              R FD+L S+GGPGPQRS+EGWI+LV+GVHEEA +D LQ
Sbjct: 76  FSGRGFDSLGSDGGPGPQRSVEGWIILVSGVHEEAQDDHLQ 116


>emb|CAC85245.1| salt tolerance protein 4 [Beta vulgaris]
          Length = 203

 Score =  103 bits (256), Expect = 3e-20
 Identities = 58/102 (56%), Positives = 67/102 (65%), Gaps = 6/102 (5%)
 Frame = -3

Query: 290 DDLMDEEGAADDA--SPRAPLPKIKSAISGG----SDGTALRKTKXXXXXXXXXXXXXXX 129
           DDLMDE+G A +A  SPRAP PKIKSAI+G     S G   +KTK               
Sbjct: 16  DDLMDEDGGAAEADGSPRAPHPKIKSAITGAGAPSSGGFGAKKTKGRGFREDADAERNSR 75

Query: 128 XXXRDFDTLDSEGGPGPQRSIEGWIVLVTGVHEEAGEDDLQN 3
              R+FD+LDS+GGPGP RSIEGWI+LVTGVHEEA E+DL N
Sbjct: 76  MTAREFDSLDSDGGPGPARSIEGWIILVTGVHEEAQEEDLLN 117


>gb|ESW28985.1| hypothetical protein PHAVU_002G034400g [Phaseolus vulgaris]
          Length = 202

 Score =  102 bits (254), Expect = 5e-20
 Identities = 58/99 (58%), Positives = 66/99 (66%), Gaps = 3/99 (3%)
 Frame = -3

Query: 290 DDLMDEEGAAD-DASPRAPLPKIKSAISGGSDG--TALRKTKXXXXXXXXXXXXXXXXXX 120
           DDLMDE+GA D DASP  P PK+KSAI+  +    TA +KTK                  
Sbjct: 18  DDLMDEDGAPDADASP--PHPKLKSAITAAATSSLTAPKKTKGRGFRQDTDANRNTRLSG 75

Query: 119 RDFDTLDSEGGPGPQRSIEGWIVLVTGVHEEAGEDDLQN 3
            DFD+L +EGGPGPQRSIEGWI+LVTGVHEEA EDDLQN
Sbjct: 76  SDFDSLTTEGGPGPQRSIEGWIILVTGVHEEAQEDDLQN 114


>gb|AFL91695.1| RNA binding protein [Raphanus sativus var. raphanistroides]
          Length = 200

 Score =  102 bits (253), Expect = 7e-20
 Identities = 53/96 (55%), Positives = 63/96 (65%)
 Frame = -3

Query: 290 DDLMDEEGAADDASPRAPLPKIKSAISGGSDGTALRKTKXXXXXXXXXXXXXXXXXXRDF 111
           DDLMDE+  A D SPRA  P+++SAISG  D +A RKTK                  RD 
Sbjct: 16  DDLMDEDLGAADISPRAAHPRLRSAISGADDESANRKTKGRGFREEKDSDRQRRLSSRDL 75

Query: 110 DTLDSEGGPGPQRSIEGWIVLVTGVHEEAGEDDLQN 3
           ++  S+GGPGPQRS+EGWIVLVTGVHEEA EDD+ N
Sbjct: 76  ESFGSDGGPGPQRSVEGWIVLVTGVHEEAQEDDIFN 111


>gb|EOY32841.1| RNA-binding family protein [Theobroma cacao]
          Length = 199

 Score =  100 bits (250), Expect = 2e-19
 Identities = 57/99 (57%), Positives = 70/99 (70%), Gaps = 3/99 (3%)
 Frame = -3

Query: 290 DDLMDEEGAADDASPRAPLPKIKSAISGGSDGTAL---RKTKXXXXXXXXXXXXXXXXXX 120
           DDLMDE+ AA DASP+AP+PK+KSAI+GG+  T+L   +KTK                  
Sbjct: 16  DDLMDED-AAGDASPQAPMPKLKSAITGGAS-TSLSGPKKTKGRGFREDDADRHSRLASR 73

Query: 119 RDFDTLDSEGGPGPQRSIEGWIVLVTGVHEEAGEDDLQN 3
            DF++L ++GGPGPQRSIEGWI+LVTGVHEEA EDDL N
Sbjct: 74  -DFESLGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLHN 111


>ref|XP_003517521.1| PREDICTED: RNA-binding protein 8A-like [Glycine max]
          Length = 197

 Score =  100 bits (250), Expect = 2e-19
 Identities = 57/97 (58%), Positives = 65/97 (67%), Gaps = 1/97 (1%)
 Frame = -3

Query: 290 DDLMDEEGAAD-DASPRAPLPKIKSAISGGSDGTALRKTKXXXXXXXXXXXXXXXXXXRD 114
           DDLMDE+GA D DASP  P PK+KSAI+  +   A +KTK                   D
Sbjct: 18  DDLMDEDGAPDADASP--PQPKLKSAITAAA---APKKTKGRGFRQDTDANRDTRLSGSD 72

Query: 113 FDTLDSEGGPGPQRSIEGWIVLVTGVHEEAGEDDLQN 3
           FD+L +EGGPGPQRSIEGWI+LVTGVHEEA EDDLQN
Sbjct: 73  FDSLTTEGGPGPQRSIEGWIILVTGVHEEAQEDDLQN 109


>ref|NP_001236162.1| uncharacterized protein LOC100527187 [Glycine max]
           gi|255631742|gb|ACU16238.1| unknown [Glycine max]
          Length = 204

 Score =  100 bits (248), Expect = 3e-19
 Identities = 55/99 (55%), Positives = 64/99 (64%), Gaps = 3/99 (3%)
 Frame = -3

Query: 290 DDLMDEEGAAD-DASPRAPLPKIKSAISGGSDGT--ALRKTKXXXXXXXXXXXXXXXXXX 120
           DDLMDE+GA D DA    P PK+KSAI+  +  +  A +KTK                  
Sbjct: 18  DDLMDEDGAPDADADASPPQPKLKSAITPAATSSLSAPKKTKGRGFRQDTDANRNTRLSG 77

Query: 119 RDFDTLDSEGGPGPQRSIEGWIVLVTGVHEEAGEDDLQN 3
            DFD+L +EGGPGPQRSIEGWI+LVTGVHEEA EDDLQN
Sbjct: 78  TDFDSLTAEGGPGPQRSIEGWIILVTGVHEEAQEDDLQN 116


>ref|XP_004511500.1| PREDICTED: RNA-binding protein 8A-like [Cicer arietinum]
          Length = 201

 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 57/99 (57%), Positives = 65/99 (65%), Gaps = 3/99 (3%)
 Frame = -3

Query: 290 DDLMDEEGAAD-DASPRAPLPKIKSAISGGSDGTALRKTKXXXXXXXXXXXXXXXXXXR- 117
           DDLMDEEGA D +ASP  P PK+KSAI+  S  +  +KTK                    
Sbjct: 18  DDLMDEEGAPDAEASP--PHPKLKSAITASSTLSVPKKTKGRGFRQDSDSAANRNSRLTG 75

Query: 116 -DFDTLDSEGGPGPQRSIEGWIVLVTGVHEEAGEDDLQN 3
            DFDTL +EGGPGPQRSIEGWI+LVTGVHEEA +DDLQN
Sbjct: 76  SDFDTLTAEGGPGPQRSIEGWIILVTGVHEEAQDDDLQN 114


>ref|NP_001274809.1| uncharacterized protein LOC102577678 [Solanum tuberosum]
           gi|76573355|gb|ABA46782.1| unknown [Solanum tuberosum]
          Length = 195

 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 55/96 (57%), Positives = 65/96 (67%)
 Frame = -3

Query: 290 DDLMDEEGAADDASPRAPLPKIKSAISGGSDGTALRKTKXXXXXXXXXXXXXXXXXXRDF 111
           DDLMDE+  A  +SPRA +PK+KSAI+GGS  +A +KTK                    F
Sbjct: 16  DDLMDEDVDAS-SSPRATIPKLKSAITGGSS-SAPKKTKGRGFREEAAEADRNARMSARF 73

Query: 110 DTLDSEGGPGPQRSIEGWIVLVTGVHEEAGEDDLQN 3
           D+LDSEGGPGP+RSIEGWIVLVTGV+EE  EDDL N
Sbjct: 74  DSLDSEGGPGPERSIEGWIVLVTGVNEETQEDDLHN 109