BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00028540
         (393 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004242268.1| PREDICTED: putative pentatricopeptide repeat...   144   2e-32
ref|XP_006357376.1| PREDICTED: putative pentatricopeptide repeat...   141   8e-32
ref|XP_002279880.2| PREDICTED: uncharacterized protein LOC100266...   141   1e-31
emb|CBI35955.3| unnamed protein product [Vitis vinifera]              141   1e-31
emb|CAN78640.1| hypothetical protein VITISV_031739 [Vitis vinifera]   141   1e-31
ref|XP_006466019.1| PREDICTED: putative pentatricopeptide repeat...   139   4e-31
ref|XP_004146851.1| PREDICTED: putative pentatricopeptide repeat...   135   4e-30
gb|EMJ18357.1| hypothetical protein PRUPE_ppa001759mg [Prunus pe...   130   1e-28
ref|XP_006426561.1| hypothetical protein CICLE_v10027602mg [Citr...   130   2e-28
gb|EXC09150.1| hypothetical protein L484_005106 [Morus notabilis]     128   9e-28
ref|XP_003547637.1| PREDICTED: putative pentatricopeptide repeat...   123   2e-26
ref|XP_004506936.1| PREDICTED: putative pentatricopeptide repeat...   122   5e-26
gb|ESW22515.1| hypothetical protein PHAVU_005G159300g [Phaseolus...   117   1e-24
ref|XP_006416685.1| hypothetical protein EUTSA_v10009551mg [Eutr...   117   1e-24
ref|NP_173207.1| pentatricopeptide repeat-containing protein [Ar...   107   1e-21
ref|XP_002890240.1| pentatricopeptide repeat-containing protein ...   107   1e-21
ref|XP_006303549.1| hypothetical protein CARUB_v10011006mg [Caps...    99   8e-19
ref|XP_006854344.1| hypothetical protein AMTR_s00039p00144170 [A...    92   5e-17
ref|XP_003551818.1| PREDICTED: pentatricopeptide repeat-containi...    81   1e-13
ref|XP_006407296.1| hypothetical protein EUTSA_v10020185mg [Eutr...    80   2e-13

>ref|XP_004242268.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g17630-like [Solanum lycopersicum]
          Length = 730

 Score =  144 bits (362), Expect = 2e-32
 Identities = 63/125 (50%), Positives = 92/125 (73%), Gaps = 1/125 (0%)
 Frame = +1

Query: 19  INQLRQVHGQIIATGCCESGFLSSRIISTYSRFGLICEAMRVFETALDMCYNNILLWNSV 198
           + QL+Q+H  II TG   S F+++R+IS YS+FGL+ EA +VFET    C++N+LLWNS+
Sbjct: 64  LQQLKQIHENIIITGSSNSSFIAARLISVYSKFGLVNEAQKVFETCPTDCFSNLLLWNSI 123

Query: 199 LRVNVSHGNNEDVLRFYVRMKRFGVMADGFTFPLVIRACTGIG-YNLCRIIHAHVLLMGL 375
           LR NVSHG  E+ ++ YV+M+ +G +ADGF FPL+IRAC   G +NLC ++H H + MG 
Sbjct: 124 LRANVSHGKCEEAVKLYVKMREYGNLADGFGFPLIIRACGMFGDHNLCSVVHCHAIQMGF 183

Query: 376 HNNLH 390
            ++L+
Sbjct: 184 RDHLY 188


>ref|XP_006357376.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g17630-like isoform X1 [Solanum tuberosum]
           gi|565382079|ref|XP_006357377.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein
           At1g17630-like isoform X2 [Solanum tuberosum]
           gi|565382081|ref|XP_006357378.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein
           At1g17630-like isoform X3 [Solanum tuberosum]
          Length = 727

 Score =  141 bits (356), Expect = 8e-32
 Identities = 62/125 (49%), Positives = 93/125 (74%), Gaps = 1/125 (0%)
 Frame = +1

Query: 19  INQLRQVHGQIIATGCCESGFLSSRIISTYSRFGLICEAMRVFETALDMCYNNILLWNSV 198
           + QL+Q+H +II T    S F+++R+IS YS+FGLI EA +VFET    C++N+LLWNS+
Sbjct: 64  LQQLKQIHEKIIITSSSNSSFIAARLISAYSKFGLINEAQKVFETCPTDCFSNLLLWNSI 123

Query: 199 LRVNVSHGNNEDVLRFYVRMKRFGVMADGFTFPLVIRACTGIG-YNLCRIIHAHVLLMGL 375
           LR N+SHG  E+ ++ YV+M+ +G +ADGF FPL+IRAC   G +NLC ++H+H + MG 
Sbjct: 124 LRANLSHGKCEEAVKLYVKMREYGNLADGFGFPLIIRACGMFGDHNLCSVVHSHAIQMGF 183

Query: 376 HNNLH 390
            ++L+
Sbjct: 184 RDHLY 188


>ref|XP_002279880.2| PREDICTED: uncharacterized protein LOC100266920 [Vitis vinifera]
          Length = 1753

 Score =  141 bits (355), Expect = 1e-31
 Identities = 68/131 (51%), Positives = 91/131 (69%), Gaps = 1/131 (0%)
 Frame = +1

Query: 1    LPQVNGINQLRQVHGQIIATGCCESGFLSSRIISTYSRFGLICEAMRVFETALDMCYNNI 180
            L Q +  +  +Q+H QII TG   S FL++R++S Y+ FGL+ +A RVFE +   C++N+
Sbjct: 879  LQQCSKSHLSQQIHSQIIVTGSHRSAFLAARVVSVYAGFGLVSDAQRVFEVSPIECFSNL 938

Query: 181  LLWNSVLRVNVSHGNNEDVLRFYVRMKRFGVMADGFTFPLVIRACTGIG-YNLCRIIHAH 357
            LLWNS+LR NV+HG  E+ L  Y RM++ GV ADGFTFPLVIRAC  +G   LCR +H H
Sbjct: 939  LLWNSILRANVAHGYCEEALEIYCRMRKLGVSADGFTFPLVIRACALMGSRKLCRSVHGH 998

Query: 358  VLLMGLHNNLH 390
            V+ MG   NLH
Sbjct: 999  VVEMGFQWNLH 1009


>emb|CBI35955.3| unnamed protein product [Vitis vinifera]
          Length = 708

 Score =  141 bits (355), Expect = 1e-31
 Identities = 68/131 (51%), Positives = 91/131 (69%), Gaps = 1/131 (0%)
 Frame = +1

Query: 1   LPQVNGINQLRQVHGQIIATGCCESGFLSSRIISTYSRFGLICEAMRVFETALDMCYNNI 180
           L Q +  +  +Q+H QII TG   S FL++R++S Y+ FGL+ +A RVFE +   C++N+
Sbjct: 41  LQQCSKSHLSQQIHSQIIVTGSHRSAFLAARVVSVYAGFGLVSDAQRVFEVSPIECFSNL 100

Query: 181 LLWNSVLRVNVSHGNNEDVLRFYVRMKRFGVMADGFTFPLVIRACTGIG-YNLCRIIHAH 357
           LLWNS+LR NV+HG  E+ L  Y RM++ GV ADGFTFPLVIRAC  +G   LCR +H H
Sbjct: 101 LLWNSILRANVAHGYCEEALEIYCRMRKLGVSADGFTFPLVIRACALMGSRKLCRSVHGH 160

Query: 358 VLLMGLHNNLH 390
           V+ MG   NLH
Sbjct: 161 VVEMGFQWNLH 171


>emb|CAN78640.1| hypothetical protein VITISV_031739 [Vitis vinifera]
          Length = 954

 Score =  141 bits (355), Expect = 1e-31
 Identities = 68/131 (51%), Positives = 91/131 (69%), Gaps = 1/131 (0%)
 Frame = +1

Query: 1   LPQVNGINQLRQVHGQIIATGCCESGFLSSRIISTYSRFGLICEAMRVFETALDMCYNNI 180
           L Q +  +  +Q+H QII TG   S FL++R++S Y+ FGL+ +A RVFE +   C++N+
Sbjct: 41  LQQCSKSHLSQQIHSQIIVTGSHRSAFLAARVVSVYAGFGLVSDAQRVFEVSPIECFSNL 100

Query: 181 LLWNSVLRVNVSHGNNEDVLRFYVRMKRFGVMADGFTFPLVIRACTGIG-YNLCRIIHAH 357
           LLWNS+LR NV+HG  E+ L  Y RM++ GV ADGFTFPLVIRAC  +G   LCR +H H
Sbjct: 101 LLWNSILRANVAHGYCEEALEIYCRMRKLGVSADGFTFPLVIRACALMGSRKLCRSVHGH 160

Query: 358 VLLMGLHNNLH 390
           V+ MG   NLH
Sbjct: 161 VVEMGFQWNLH 171


>ref|XP_006466019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g17630-like [Citrus sinensis]
          Length = 712

 Score =  139 bits (350), Expect = 4e-31
 Identities = 69/135 (51%), Positives = 95/135 (70%), Gaps = 5/135 (3%)
 Frame = +1

Query: 1   LPQVNGINQLRQVHGQIIATGCCESGFLSSRIISTYSRFGLICEAMRVFETALDMCYNNI 180
           L Q   I+QL+QVH Q+I TG   S FL++R++S Y+RFG + +A  VFETA   C ++ 
Sbjct: 38  LQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSS 97

Query: 181 LLWNSVLRVNVSHGNNEDVLRFYVRMKRFGVMADGFTFPLVIRACTGIG-----YNLCRI 345
           LLWNS+LRVNVS+G  E+ L+ YV+M++ GV+ DGFTFPLVIRAC  +G     ++  +I
Sbjct: 98  LLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQI 157

Query: 346 IHAHVLLMGLHNNLH 390
           +H HVL MG   N+H
Sbjct: 158 VHNHVLQMGFQGNVH 172


>ref|XP_004146851.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g17630-like [Cucumis sativus]
           gi|449522932|ref|XP_004168479.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein
           At1g17630-like [Cucumis sativus]
          Length = 705

 Score =  135 bits (341), Expect = 4e-30
 Identities = 61/131 (46%), Positives = 91/131 (69%), Gaps = 1/131 (0%)
 Frame = +1

Query: 1   LPQVNGINQLRQVHGQIIATGCCESGFLSSRIISTYSRFGLICEAMRVFETALDMCYNNI 180
           L Q NGI   +QVH   + TG   S F+S+R++S YSR+GL+ +A +VF +A   CY+N 
Sbjct: 45  LRQCNGIQHSKQVHSATVVTGAYCSAFVSARLVSIYSRYGLVSDARKVFGSAPFECYSNF 104

Query: 181 LLWNSVLRVNVSHGNNEDVLRFYVRMKRFGVMADGFTFPLVIRACTGIG-YNLCRIIHAH 357
           LLWNS++R NV HG   + L+ Y +M+ +GV+ DGFTFPL++RA + +G +N+C+ +H H
Sbjct: 105 LLWNSIIRANVYHGYCIEALQLYGKMRNYGVLGDGFTFPLLLRASSNLGAFNMCKNLHCH 164

Query: 358 VLLMGLHNNLH 390
           V+  G  N+LH
Sbjct: 165 VVQFGFQNHLH 175


>gb|EMJ18357.1| hypothetical protein PRUPE_ppa001759mg [Prunus persica]
          Length = 769

 Score =  130 bits (328), Expect = 1e-28
 Identities = 65/131 (49%), Positives = 88/131 (67%), Gaps = 1/131 (0%)
 Frame = +1

Query: 1   LPQVNGINQLRQVHGQIIATGCCESGFLSSRIISTYSRFGLICEAMRVFETALDMCYNNI 180
           L Q  G  Q +QVH QII TG  +S FL++++++ Y+R GLI +A +VF+T      +N+
Sbjct: 62  LRQCTGNKQCKQVHAQIITTGTYQSEFLAAKLVTAYARIGLIFDAQKVFDTGPVEGRSNL 121

Query: 181 LLWNSVLRVNVSHGNNEDVLRFYVRMKRFGVMADGFTFPLVIRACTGIG-YNLCRIIHAH 357
           LLWNS+LR NVSHG  E  L+ Y +M   GV+ DGFTFPLVIRAC  +    L + +H+H
Sbjct: 122 LLWNSILRANVSHGFYEQALKLYDKMTNLGVLGDGFTFPLVIRACAFMDRLKLSKNVHSH 181

Query: 358 VLLMGLHNNLH 390
           VL MG  N+LH
Sbjct: 182 VLQMGFQNHLH 192


>ref|XP_006426561.1| hypothetical protein CICLE_v10027602mg [Citrus clementina]
           gi|557528551|gb|ESR39801.1| hypothetical protein
           CICLE_v10027602mg [Citrus clementina]
          Length = 930

 Score =  130 bits (327), Expect = 2e-28
 Identities = 66/136 (48%), Positives = 93/136 (68%), Gaps = 6/136 (4%)
 Frame = +1

Query: 1   LPQVNGINQLRQVHGQIIATGCCESGFLSSRIISTYSRFGLICEAMRVFETALDMCYNNI 180
           L Q   I+QL+QVH Q+I TG   S FL++R++S Y+RFG + +A  VFET    C ++ 
Sbjct: 38  LQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETTPFDCKSSS 97

Query: 181 LLWNSVLRVNVSHGNNEDVLRFYVRMKRFGVMADGFTFPLVIR-ACTGIG-----YNLCR 342
           LLWNS++R NVS+G  E+ L+ YV+M++ GV+ DGFTFPLVIR AC  +G     ++  +
Sbjct: 98  LLWNSIVRANVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRAACKFMGSFRFRFSFGQ 157

Query: 343 IIHAHVLLMGLHNNLH 390
           I+H HVL MG   N+H
Sbjct: 158 IVHNHVLQMGFQGNVH 173


>gb|EXC09150.1| hypothetical protein L484_005106 [Morus notabilis]
          Length = 782

 Score =  128 bits (321), Expect = 9e-28
 Identities = 65/133 (48%), Positives = 90/133 (67%), Gaps = 2/133 (1%)
 Frame = +1

Query: 1   LPQVNGINQLRQVHGQIIATGCCESGFLSSRIISTYSRFGLICEAMRVF-ETALDMCYNN 177
           L Q       +Q+H Q+I +G   SGFL+SR++S YSR GL+ +A +VF E  ++ C +N
Sbjct: 62  LKQCTKTQHCKQLHSQVIVSGAHRSGFLASRLVSVYSRLGLVGDAQKVFDEFPVENC-SN 120

Query: 178 ILLWNSVLRVNVSHGNNEDVLRFYVRMKRFGVMADGFTFPLVIRACTGIG-YNLCRIIHA 354
           +LLWNS+ R NVSHG  ++ L+ + +M++ GV  DGFTFPL+IRAC  IG   LCR +H 
Sbjct: 121 LLLWNSIARANVSHGLYKEALQLFDKMRKLGVWPDGFTFPLIIRACAFIGSLALCRRVHG 180

Query: 355 HVLLMGLHNNLHA 393
            VL MG  N+LHA
Sbjct: 181 LVLQMGFRNHLHA 193


>ref|XP_003547637.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g17630-like [Glycine max]
          Length = 696

 Score =  123 bits (309), Expect = 2e-26
 Identities = 56/125 (44%), Positives = 83/125 (66%), Gaps = 1/125 (0%)
 Frame = +1

Query: 19  INQLRQVHGQIIATGCCESGFLSSRIISTYSRFGLICEAMRVFETALDMCYNNILLWNSV 198
           + Q RQ+H Q++ T      FL++R+I+ Y+RF  +  A +VF+       +++LLWNS+
Sbjct: 44  LQQARQLHSQLVLTTAHRLPFLAARLIAVYARFAFLSHARKVFDAIPLESLHHLLLWNSI 103

Query: 199 LRVNVSHGNNEDVLRFYVRMKRFGVMADGFTFPLVIRACTGIGYN-LCRIIHAHVLLMGL 375
           +R NVSHG ++  L  YV M++ G + DGFT PLVIRAC+ +G + LCRI+H H L MG 
Sbjct: 104 IRANVSHGYHQHALELYVEMRKLGFLPDGFTLPLVIRACSSLGSSYLCRIVHCHALQMGF 163

Query: 376 HNNLH 390
            N+LH
Sbjct: 164 RNHLH 168


>ref|XP_004506936.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g17630-like [Cicer arietinum]
          Length = 716

 Score =  122 bits (306), Expect = 5e-26
 Identities = 58/125 (46%), Positives = 86/125 (68%), Gaps = 1/125 (0%)
 Frame = +1

Query: 19  INQLRQVHGQIIATGCCESGFLSSRIISTYSRFGLICEAMRVFETALDMCYNNILLWNSV 198
           + Q RQ+H Q++        FLSSR+I+TY+RFG I E  +VF+T       +ILLWNS+
Sbjct: 46  LQQTRQIHTQLLQHCFHHFPFLSSRLIATYARFGSISECRKVFKTTPFESLQHILLWNSI 105

Query: 199 LRVNVSHGNNEDVLRFYVRMKRFGVMADGFTFPLVIRACTGIG-YNLCRIIHAHVLLMGL 375
           +R NV+HG  +  ++ YV+M +FG + DGFT P++IR+C+ IG  +LCRI+H HVL +G 
Sbjct: 106 IRANVTHGFYDYAIKIYVQMIKFGFLPDGFTLPMIIRSCSFIGVVSLCRIVHCHVLELGY 165

Query: 376 HNNLH 390
            N++H
Sbjct: 166 RNHVH 170


>gb|ESW22515.1| hypothetical protein PHAVU_005G159300g [Phaseolus vulgaris]
          Length = 704

 Score =  117 bits (294), Expect = 1e-24
 Identities = 52/125 (41%), Positives = 84/125 (67%), Gaps = 1/125 (0%)
 Frame = +1

Query: 19  INQLRQVHGQIIATGCCESGFLSSRIISTYSRFGLICEAMRVFETALDMCYNNILLWNSV 198
           ++Q RQVH Q++ T      FL++ +I+ Y+RFG + +A +VF        +++LLWNS+
Sbjct: 56  LHQARQVHSQLLLTAAHRLPFLAASLIAVYARFGFLSDACKVFAATPVEGLHHLLLWNSI 115

Query: 199 LRVNVSHGNNEDVLRFYVRMKRFGVMADGFTFPLVIRACTGIGY-NLCRIIHAHVLLMGL 375
           +R NVSHG ++  L+ Y+ M++ G++ DGFT PL+IRA + +   +LCRI+H H L +G 
Sbjct: 116 IRANVSHGYHQRALQLYLEMRKLGILPDGFTLPLIIRAFSSLAISDLCRIVHCHALQLGF 175

Query: 376 HNNLH 390
            N+LH
Sbjct: 176 RNHLH 180


>ref|XP_006416685.1| hypothetical protein EUTSA_v10009551mg [Eutrema salsugineum]
           gi|557094456|gb|ESQ35038.1| hypothetical protein
           EUTSA_v10009551mg [Eutrema salsugineum]
          Length = 731

 Score =  117 bits (294), Expect = 1e-24
 Identities = 57/124 (45%), Positives = 83/124 (66%), Gaps = 2/124 (1%)
 Frame = +1

Query: 25  QLRQVHGQIIATGCC-ESGFLSSRIISTYSRFGLICEAMRVFETALDMCYNNILLWNSVL 201
           Q RQVH Q++ +     SG L++  +S YSR GL+ +A  VFET   + ++++LLWNS+L
Sbjct: 71  QCRQVHAQVLVSDLIYRSGSLAASFVSVYSRLGLLLDARNVFETVSLVLWSDLLLWNSIL 130

Query: 202 RVNVSHGNNEDVLRFYVRMKRFGVMADGFTFPLVIRACTGIG-YNLCRIIHAHVLLMGLH 378
           + NVSHG +ED L  Y  M++ G+  DGF  PLV+RAC  +G + LCR +H+ V+ +GL 
Sbjct: 131 KANVSHGLHEDALELYAGMRQRGLTGDGFIIPLVLRACRYLGHFGLCRALHSLVIQIGLQ 190

Query: 379 NNLH 390
            NLH
Sbjct: 191 ENLH 194



 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 30/107 (28%), Positives = 56/107 (52%)
 Frame = +1

Query: 7   QVNGINQLRQVHGQIIATGCCESGFLSSRIISTYSRFGLICEAMRVFETALDMCYNNILL 186
           ++  +N  +++HG +I T   E+  + + +++ Y++ G + E   VFE   D    +++ 
Sbjct: 446 ELTALNLGKEIHGHVIRTSMSENILVQNALVNMYTKCGSLSEGNLVFEAIKD---KDLIS 502

Query: 187 WNSVLRVNVSHGNNEDVLRFYVRMKRFGVMADGFTFPLVIRACTGIG 327
           WNS+++    HG  E  L  + RM + G+  DG     V+ ACT  G
Sbjct: 503 WNSIIKGYGMHGFGERALSMFDRMIKSGLHPDGIALVAVLSACTHAG 549


>ref|NP_173207.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75175206|sp|Q9LNP2.1|PPR47_ARATH RecName:
           Full=Putative pentatricopeptide repeat-containing
           protein At1g17630 gi|8778465|gb|AAF79473.1|AC022492_17
           F1L3.33 [Arabidopsis thaliana]
           gi|332191495|gb|AEE29616.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 731

 Score =  107 bits (268), Expect = 1e-21
 Identities = 53/124 (42%), Positives = 79/124 (63%), Gaps = 2/124 (1%)
 Frame = +1

Query: 25  QLRQVHGQIIATGCC-ESGFLSSRIISTYSRFGLICEAMRVFETALDMCYNNILLWNSVL 201
           Q RQVH Q++ +     SG L++ +IS Y+R GL+ +A  VFET   +  +++ LWNS+L
Sbjct: 71  QCRQVHAQVLLSDFIFRSGSLAANLISVYARLGLLLDARNVFETVSLVLLSDLRLWNSIL 130

Query: 202 RVNVSHGNNEDVLRFYVRMKRFGVMADGFTFPLVIRACTGIG-YNLCRIIHAHVLLMGLH 378
           + NVSHG  E+ L  Y  M++ G+  DG+  PL++RAC  +G + LCR  H  V+ +GL 
Sbjct: 131 KANVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLK 190

Query: 379 NNLH 390
            NLH
Sbjct: 191 ENLH 194



 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 31/107 (28%), Positives = 55/107 (51%)
 Frame = +1

Query: 7   QVNGINQLRQVHGQIIATGCCESGFLSSRIISTYSRFGLICEAMRVFETALDMCYNNILL 186
           ++  +N  R++HG +I T   E+  + + +++ Y++ GL+ E   VFE   D    +++ 
Sbjct: 446 ELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRD---KDLIS 502

Query: 187 WNSVLRVNVSHGNNEDVLRFYVRMKRFGVMADGFTFPLVIRACTGIG 327
           WNS+++    HG  E  L  + RM   G   DG     V+ AC+  G
Sbjct: 503 WNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAG 549


>ref|XP_002890240.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297336082|gb|EFH66499.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 763

 Score =  107 bits (268), Expect = 1e-21
 Identities = 52/124 (41%), Positives = 78/124 (62%), Gaps = 2/124 (1%)
 Frame = +1

Query: 25  QLRQVHGQIIATGCC-ESGFLSSRIISTYSRFGLICEAMRVFETALDMCYNNILLWNSVL 201
           Q +QVH Q++ +     SG L++  +S YSR GL+ +A  VFET   + ++++ LWNS+L
Sbjct: 71  QCKQVHAQVLVSDYIYRSGSLAANFVSVYSRLGLLLDARNVFETVSLVLWSDLRLWNSIL 130

Query: 202 RVNVSHGNNEDVLRFYVRMKRFGVMADGFTFPLVIRACTGIG-YNLCRIIHAHVLLMGLH 378
           + NVSHG  E+    Y  M+  G+  DGF  PL++RAC  +G + LCR  H+ V+ +GL 
Sbjct: 131 KANVSHGLYENAFELYRGMRERGLTGDGFILPLILRACRYLGRFGLCRAFHSQVIQIGLK 190

Query: 379 NNLH 390
            NLH
Sbjct: 191 ENLH 194



 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 30/107 (28%), Positives = 56/107 (52%)
 Frame = +1

Query: 7   QVNGINQLRQVHGQIIATGCCESGFLSSRIISTYSRFGLICEAMRVFETALDMCYNNILL 186
           ++  +N  R++HG +I T   ++  + + +++ Y++ GL+ E   VFE   D    +++ 
Sbjct: 446 ELPALNLGREIHGHVIRTSMSDNILVQNALVNMYTKCGLLREGSLVFEAIRD---KDLIS 502

Query: 187 WNSVLRVNVSHGNNEDVLRFYVRMKRFGVMADGFTFPLVIRACTGIG 327
           WNS+++    HG  E  L  + RM + G   DG     V+ AC+  G
Sbjct: 503 WNSIIKGYGMHGFGEKALSMFDRMIKSGCHPDGIALVAVLSACSHAG 549


>ref|XP_006303549.1| hypothetical protein CARUB_v10011006mg [Capsella rubella]
           gi|482572260|gb|EOA36447.1| hypothetical protein
           CARUB_v10011006mg [Capsella rubella]
          Length = 728

 Score = 98.6 bits (244), Expect = 8e-19
 Identities = 50/124 (40%), Positives = 78/124 (62%), Gaps = 2/124 (1%)
 Frame = +1

Query: 25  QLRQVHGQ-IIATGCCESGFLSSRIISTYSRFGLICEAMRVFETALDMCYNNILLWNSVL 201
           Q +QVH + +++     SG L++  IS YSR GL+ +A  VFET   +  +++ L  S+L
Sbjct: 73  QCKQVHARALVSHFFYRSGSLAANFISVYSRLGLLVDARNVFETVSFVLCSDLRLCYSIL 132

Query: 202 RVNVSHGNNEDVLRFYVRMKRFGVMADGFTFPLVIRACTGIG-YNLCRIIHAHVLLMGLH 378
           + NVSHG +ED L  Y  M+  G+  DG+  PL++RA   +G + LC+  H+HV+ +GL 
Sbjct: 133 KANVSHGLHEDALELYTGMREQGLAGDGYVLPLILRASRYLGRFGLCQAFHSHVIQIGLK 192

Query: 379 NNLH 390
           +NLH
Sbjct: 193 DNLH 196



 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 29/107 (27%), Positives = 56/107 (52%)
 Frame = +1

Query: 7   QVNGINQLRQVHGQIIATGCCESGFLSSRIISTYSRFGLICEAMRVFETALDMCYNNILL 186
           ++  +N  R++HG ++ T   ++  + + +++ Y++ GL+ E   VFE   D    +++ 
Sbjct: 446 ELPALNLGREIHGHVVRTSMSDNILVQNALVNMYTKCGLLNEGSLVFEAIRD---KDLIS 502

Query: 187 WNSVLRVNVSHGNNEDVLRFYVRMKRFGVMADGFTFPLVIRACTGIG 327
           WNS+++    HG  +  L  + RM R G   DG     V+ AC+  G
Sbjct: 503 WNSIIKGYGMHGFGDKALSMFDRMIRSGCRPDGIALVAVLSACSHAG 549


>ref|XP_006854344.1| hypothetical protein AMTR_s00039p00144170 [Amborella trichopoda]
           gi|548858020|gb|ERN15811.1| hypothetical protein
           AMTR_s00039p00144170 [Amborella trichopoda]
          Length = 485

 Score = 92.4 bits (228), Expect = 5e-17
 Identities = 47/128 (36%), Positives = 72/128 (56%), Gaps = 1/128 (0%)
 Frame = +1

Query: 10  VNGINQLRQVHGQIIATGCCESGFLSSRIISTYSRFGLICEAMRVFETALDMCYNNILLW 189
           +N I + +Q H   I TG  +  FL +++I+ Y R GL+ ++   F +  +     IL W
Sbjct: 30  MNAIQEAKQTHVHAIITGFDQYAFLQAKVIAMYDRLGLLIDSRMAFNSIRNP---KILSW 86

Query: 190 NSVLRVNVSHGNNEDVLRFYVRMKRFGVMADGFTFPLVIRACTGIG-YNLCRIIHAHVLL 366
           N+++R  V HGN  + +R Y  M   GV  DGFTFPL+IR+C+  G    CR +H  ++ 
Sbjct: 87  NAIIRAYVCHGNFNEAMRMYHLMAANGVCGDGFTFPLIIRSCSATGSVEECRKVHDDLVQ 146

Query: 367 MGLHNNLH 390
           +GL   LH
Sbjct: 147 VGLELRLH 154


>ref|XP_003551818.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like [Glycine max]
          Length = 727

 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 38/121 (31%), Positives = 71/121 (58%), Gaps = 1/121 (0%)
 Frame = +1

Query: 28  LRQVHGQIIATGCCESGFLSSRIISTYSRFGLICEAMRVFETALDMCYNNILLWNSVLRV 207
           L Q+H +++ +G   +GFL +++++  S  G IC A ++F+   + CY ++ +WN+++R 
Sbjct: 72  LDQIHNRLVISGLQHNGFLMTKLVNGSSNLGQICYARKLFD---EFCYPDVFMWNAIIRS 128

Query: 208 NVSHGNNEDVLRFYVRMKRFGVMADGFTFPLVIRACTG-IGYNLCRIIHAHVLLMGLHNN 384
              +    D +  Y  M+  GV  DGFTFP V++ACT  + + L  IIH  ++  G  ++
Sbjct: 129 YSRNNMYRDTVEMYRWMRWTGVHPDGFTFPYVLKACTELLDFGLSCIIHGQIIKYGFGSD 188

Query: 385 L 387
           +
Sbjct: 189 V 189


>ref|XP_006407296.1| hypothetical protein EUTSA_v10020185mg [Eutrema salsugineum]
           gi|557108442|gb|ESQ48749.1| hypothetical protein
           EUTSA_v10020185mg [Eutrema salsugineum]
          Length = 694

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 43/118 (36%), Positives = 70/118 (59%), Gaps = 1/118 (0%)
 Frame = +1

Query: 22  NQLRQVHGQIIATGCCESGFLSSRIISTYSRFGLICEAMRVFETALDMCYNNILLWNSVL 201
           +QLRQ+H +++  G   SGFL +++I   S FG IC A +VF+   D+    I  WN+++
Sbjct: 35  SQLRQIHARLLVLGLQFSGFLITKLIHASSSFGDICFARQVFD---DLPRPQIFPWNAII 91

Query: 202 RVNVSHGNNEDVLRFYVRMKRFGVMADGFTFPLVIRACTGI-GYNLCRIIHAHVLLMG 372
           R    +   +D L  Y +M+   V  D FTFP +++AC+G+    + R++HAHV  +G
Sbjct: 92  RGYSRNNLFQDALLMYSKMQLARVSPDSFTFPHLLKACSGLPNLQMGRLVHAHVFRLG 149