BLASTX nr result
ID: Rheum21_contig00028338
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00028338
(420 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_005031740.1| PREDICTED: LOW QUALITY PROTEIN: actin, gamma... 91 2e-16
ref|XP_006940721.1| PREDICTED: LOW QUALITY PROTEIN: actin, cytop... 90 4e-16
gb|AFK11562.1| beta-actin [Callorhinchus milii] 90 4e-16
ref|XP_006172147.1| PREDICTED: LOW QUALITY PROTEIN: actin, gamma... 89 5e-16
gb|EXC30837.1| hypothetical protein L484_028016 [Morus notabilis] 89 6e-16
gb|EXC10640.1| hypothetical protein L484_025221 [Morus notabilis] 89 6e-16
ref|XP_006926969.1| PREDICTED: LOW QUALITY PROTEIN: actin, gamma... 89 6e-16
ref|NP_200745.1| actin 4 [Arabidopsis thaliana] gi|145334847|ref... 89 6e-16
sp|P46258.1|ACT3_PEA RecName: Full=Actin-3 gi|940813|emb|CAA6202... 89 6e-16
sp|P53504.1|ACT1_SORBI RecName: Full=Actin-1 gi|499012|emb|CAA55... 89 6e-16
ref|NP_566988.1| actin 3 [Arabidopsis thaliana] gi|30687201|ref|... 89 6e-16
sp|O81221.1|ACT_GOSHI RecName: Full=Actin gi|3420239|gb|AAC31886... 89 6e-16
ref|NP_001051086.1| Os03g0718100 [Oryza sativa Japonica Group] g... 89 6e-16
sp|P30168.2|ACT6_SOLTU RecName: Full=Actin-71 gi|21538|emb|CAA39... 89 6e-16
ref|XP_006664254.1| PREDICTED: actin-like [Oryza brachyantha] 89 6e-16
ref|XP_006350765.1| PREDICTED: actin-like [Solanum tuberosum] 89 6e-16
ref|XP_006348992.1| PREDICTED: actin-58-like [Solanum tuberosum] 89 6e-16
ref|XP_006345961.1| PREDICTED: actin-58-like [Solanum tuberosum] 89 6e-16
ref|XP_006341033.1| PREDICTED: actin-71-like [Solanum tuberosum] 89 6e-16
gb|ESW34319.1| hypothetical protein PHAVU_001G142500g [Phaseolus... 89 6e-16
>ref|XP_005031740.1| PREDICTED: LOW QUALITY PROTEIN: actin, gamma 1 [Anas platyrhynchos]
Length = 289
Score = 90.9 bits (224), Expect = 2e-16
Identities = 44/61 (72%), Positives = 49/61 (80%)
Frame = +3
Query: 3 RKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF*CQCLKMETAERRVCKLPM 182
RKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF C ++ RR+C +
Sbjct: 213 RKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCFXTDCXQV----RRICCMSC 268
Query: 183 L 185
L
Sbjct: 269 L 269
>ref|XP_006940721.1| PREDICTED: LOW QUALITY PROTEIN: actin, cytoplasmic 2 [Felis catus]
Length = 411
Score = 89.7 bits (221), Expect = 4e-16
Identities = 46/63 (73%), Positives = 49/63 (77%), Gaps = 4/63 (6%)
Frame = +3
Query: 3 RKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF*CQCLKME----TAERRVC 170
RKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF C +M T+E R
Sbjct: 335 RKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCFXTDCGQMRSVCCTSEFRSL 394
Query: 171 KLP 179
LP
Sbjct: 395 GLP 397
>gb|AFK11562.1| beta-actin [Callorhinchus milii]
Length = 413
Score = 89.7 bits (221), Expect = 4e-16
Identities = 41/50 (82%), Positives = 44/50 (88%)
Frame = +3
Query: 3 RKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF*CQCLKMET 152
RKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF C +M +
Sbjct: 336 RKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCFQMDCKRMRS 385
>ref|XP_006172147.1| PREDICTED: LOW QUALITY PROTEIN: actin, gamma 1 [Tupaia chinensis]
Length = 393
Score = 89.4 bits (220), Expect = 5e-16
Identities = 41/50 (82%), Positives = 44/50 (88%)
Frame = +3
Query: 3 RKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF*CQCLKMET 152
RKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF C +M +
Sbjct: 335 RKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCFXADCEQMRS 384
>gb|EXC30837.1| hypothetical protein L484_028016 [Morus notabilis]
Length = 377
Score = 89.0 bits (219), Expect = 6e-16
Identities = 41/41 (100%), Positives = 41/41 (100%)
Frame = +3
Query: 3 RKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 125
RKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF
Sbjct: 337 RKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>gb|EXC10640.1| hypothetical protein L484_025221 [Morus notabilis]
Length = 377
Score = 89.0 bits (219), Expect = 6e-16
Identities = 41/41 (100%), Positives = 41/41 (100%)
Frame = +3
Query: 3 RKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 125
RKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF
Sbjct: 337 RKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>ref|XP_006926969.1| PREDICTED: LOW QUALITY PROTEIN: actin, gamma 1 [Pteropus alecto]
Length = 393
Score = 89.0 bits (219), Expect = 6e-16
Identities = 41/48 (85%), Positives = 43/48 (89%)
Frame = +3
Query: 3 RKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF*CQCLKM 146
RKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF C +M
Sbjct: 335 RKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCFXTDCRQM 382
>ref|NP_200745.1| actin 4 [Arabidopsis thaliana] gi|145334847|ref|NP_001078769.1|
actin 4 [Arabidopsis thaliana]
gi|1703119|sp|P53494.1|ACT4_ARATH RecName: Full=Actin-4
gi|1002531|gb|AAB39403.1| actin-4 [Arabidopsis thaliana]
gi|8885543|dbj|BAA97473.1| actin 4 [Arabidopsis
thaliana] gi|332009793|gb|AED97176.1| actin 4
[Arabidopsis thaliana] gi|332009794|gb|AED97177.1| actin
4 [Arabidopsis thaliana]
Length = 377
Score = 89.0 bits (219), Expect = 6e-16
Identities = 41/41 (100%), Positives = 41/41 (100%)
Frame = +3
Query: 3 RKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 125
RKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF
Sbjct: 337 RKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>sp|P46258.1|ACT3_PEA RecName: Full=Actin-3 gi|940813|emb|CAA62028.1| actin [Pisum
sativum]
Length = 377
Score = 89.0 bits (219), Expect = 6e-16
Identities = 41/41 (100%), Positives = 41/41 (100%)
Frame = +3
Query: 3 RKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 125
RKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF
Sbjct: 337 RKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>sp|P53504.1|ACT1_SORBI RecName: Full=Actin-1 gi|499012|emb|CAA55923.1| actin [Sorghum
bicolor]
Length = 377
Score = 89.0 bits (219), Expect = 6e-16
Identities = 41/41 (100%), Positives = 41/41 (100%)
Frame = +3
Query: 3 RKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 125
RKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF
Sbjct: 337 RKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>ref|NP_566988.1| actin 3 [Arabidopsis thaliana] gi|30687201|ref|NP_850284.1| actin 1
[Arabidopsis thaliana] gi|79324605|ref|NP_001031504.1|
actin 1 [Arabidopsis thaliana]
gi|460415910|ref|XP_004253296.1| PREDICTED: actin-1-like
[Solanum lycopersicum]
gi|317374840|sp|P0CJ46.1|ACT1_ARATH RecName:
Full=Actin-1 gi|317374841|sp|P0CJ47.1|ACT3_ARATH
RecName: Full=Actin-3 gi|1145695|gb|AAA98562.1| actin 3
[Arabidopsis thaliana] gi|15146304|gb|AAK83635.1|
AT3g53750/F5K20_50 [Arabidopsis thaliana]
gi|18650648|gb|AAL75893.1| At2g37620/F13M22.12
[Arabidopsis thaliana] gi|20147381|gb|AAM10400.1|
At2g37620/F13M22.12 [Arabidopsis thaliana]
gi|21554576|gb|AAM63620.1| actin (ACT3) [Arabidopsis
thaliana] gi|25090278|gb|AAN72268.1| At3g53750/F5K20_50
[Arabidopsis thaliana] gi|330254332|gb|AEC09426.1| actin
1 [Arabidopsis thaliana] gi|330254333|gb|AEC09427.1|
actin 1 [Arabidopsis thaliana]
gi|332645617|gb|AEE79138.1| actin 3 [Arabidopsis
thaliana]
Length = 377
Score = 89.0 bits (219), Expect = 6e-16
Identities = 41/41 (100%), Positives = 41/41 (100%)
Frame = +3
Query: 3 RKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 125
RKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF
Sbjct: 337 RKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>sp|O81221.1|ACT_GOSHI RecName: Full=Actin gi|3420239|gb|AAC31886.1| actin [Gossypium
hirsutum]
Length = 377
Score = 89.0 bits (219), Expect = 6e-16
Identities = 41/41 (100%), Positives = 41/41 (100%)
Frame = +3
Query: 3 RKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 125
RKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF
Sbjct: 337 RKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>ref|NP_001051086.1| Os03g0718100 [Oryza sativa Japonica Group]
gi|122246802|sp|Q10DV7.1|ACT1_ORYSJ RecName:
Full=Actin-1; AltName: Full=OsRAC1
gi|148886767|sp|A2XLF2.1|ACT1_ORYSI RecName:
Full=Actin-1 gi|30409356|dbj|BAC76319.1| actin [Oryza
sativa Japonica Group] gi|108710772|gb|ABF98567.1|
Actin-1, putative, expressed [Oryza sativa Japonica
Group] gi|113549557|dbj|BAF13000.1| Os03g0718100 [Oryza
sativa Japonica Group] gi|125545523|gb|EAY91662.1|
hypothetical protein OsI_13301 [Oryza sativa Indica
Group] gi|125587718|gb|EAZ28382.1| hypothetical protein
OsJ_12362 [Oryza sativa Japonica Group]
gi|530723019|gb|AGT42318.1| actin-1 [Oryza sativa
Japonica Group]
Length = 377
Score = 89.0 bits (219), Expect = 6e-16
Identities = 41/41 (100%), Positives = 41/41 (100%)
Frame = +3
Query: 3 RKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 125
RKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF
Sbjct: 337 RKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>sp|P30168.2|ACT6_SOLTU RecName: Full=Actin-71 gi|21538|emb|CAA39279.1| actin [Solanum
tuberosum]
Length = 377
Score = 89.0 bits (219), Expect = 6e-16
Identities = 41/41 (100%), Positives = 41/41 (100%)
Frame = +3
Query: 3 RKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 125
RKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF
Sbjct: 337 RKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>ref|XP_006664254.1| PREDICTED: actin-like [Oryza brachyantha]
Length = 222
Score = 89.0 bits (219), Expect = 6e-16
Identities = 41/41 (100%), Positives = 41/41 (100%)
Frame = +3
Query: 3 RKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 125
RKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF
Sbjct: 182 RKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 222
>ref|XP_006350765.1| PREDICTED: actin-like [Solanum tuberosum]
Length = 377
Score = 89.0 bits (219), Expect = 6e-16
Identities = 41/41 (100%), Positives = 41/41 (100%)
Frame = +3
Query: 3 RKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 125
RKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF
Sbjct: 337 RKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>ref|XP_006348992.1| PREDICTED: actin-58-like [Solanum tuberosum]
Length = 378
Score = 89.0 bits (219), Expect = 6e-16
Identities = 41/41 (100%), Positives = 41/41 (100%)
Frame = +3
Query: 3 RKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 125
RKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF
Sbjct: 338 RKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 378
>ref|XP_006345961.1| PREDICTED: actin-58-like [Solanum tuberosum]
Length = 377
Score = 89.0 bits (219), Expect = 6e-16
Identities = 41/41 (100%), Positives = 41/41 (100%)
Frame = +3
Query: 3 RKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 125
RKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF
Sbjct: 337 RKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>ref|XP_006341033.1| PREDICTED: actin-71-like [Solanum tuberosum]
Length = 377
Score = 89.0 bits (219), Expect = 6e-16
Identities = 41/41 (100%), Positives = 41/41 (100%)
Frame = +3
Query: 3 RKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 125
RKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF
Sbjct: 337 RKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>gb|ESW34319.1| hypothetical protein PHAVU_001G142500g [Phaseolus vulgaris]
Length = 377
Score = 89.0 bits (219), Expect = 6e-16
Identities = 41/41 (100%), Positives = 41/41 (100%)
Frame = +3
Query: 3 RKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 125
RKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF
Sbjct: 337 RKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377