BLASTX nr result

ID: Rheum21_contig00028329 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00028329
         (236 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABS17589.1| SKP1 component-like 1 [Humulus lupulus]                 55   1e-05

>gb|ABS17589.1| SKP1 component-like 1 [Humulus lupulus]
          Length = 157

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 29/44 (65%), Positives = 35/44 (79%)
 Frame = -3

Query: 210 TSGKKTVLKSSDGETL*VDEAVASESVTIKNMIENVSGNNTIPL 79
           ++G+K  LKSSDGETL VDEAVA ES TIK+MIE+   +N IPL
Sbjct: 2   STGRKITLKSSDGETLEVDEAVALESQTIKHMIEDDCADNGIPL 45


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