BLASTX nr result
ID: Rheum21_contig00028322
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00028322
(626 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004955013.1| PREDICTED: E3 ubiquitin-protein ligase Os03g... 110 4e-22
ref|XP_002452317.1| hypothetical protein SORBIDRAFT_04g023600 [S... 105 8e-21
dbj|BAK03766.1| predicted protein [Hordeum vulgare subsp. vulgare] 105 1e-20
ref|XP_006471949.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-... 104 2e-20
ref|XP_006433262.1| hypothetical protein CICLE_v10001478mg [Citr... 104 2e-20
ref|NP_001047194.1| Os02g0572200 [Oryza sativa Japonica Group] g... 103 4e-20
gb|ABR16339.1| unknown [Picea sitchensis] 103 4e-20
ref|NP_001142103.1| uncharacterized LOC100274267 precursor [Zea ... 103 4e-20
gb|EAY86372.1| hypothetical protein OsI_07750 [Oryza sativa Indi... 103 4e-20
ref|XP_003581296.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-... 103 5e-20
ref|XP_002462520.1| hypothetical protein SORBIDRAFT_02g027200 [S... 102 7e-20
gb|EAZ23518.1| hypothetical protein OsJ_07214 [Oryza sativa Japo... 102 7e-20
ref|XP_006827939.1| hypothetical protein AMTR_s00008p00185200 [A... 102 9e-20
ref|XP_006648767.1| PREDICTED: E3 ubiquitin-protein ligase ATL31... 102 1e-19
ref|XP_006382625.1| hypothetical protein POPTR_0005s03900g [Popu... 102 1e-19
ref|XP_002319561.2| hypothetical protein POPTR_0013s02670g [Popu... 102 1e-19
ref|XP_002328426.1| predicted protein [Populus trichocarpa] 102 1e-19
gb|EMS46532.1| E3 ubiquitin-protein ligase ATL6 [Triticum urartu] 101 2e-19
ref|XP_003626315.1| RING finger protein [Medicago truncatula] gi... 101 2e-19
ref|NP_001062080.1| Os08g0484200 [Oryza sativa Japonica Group] g... 101 2e-19
>ref|XP_004955013.1| PREDICTED: E3 ubiquitin-protein ligase Os03g0188200-like [Setaria
italica]
Length = 333
Score = 110 bits (274), Expect = 4e-22
Identities = 48/109 (44%), Positives = 70/109 (64%)
Frame = +3
Query: 108 GLDPAAVAALPIDHFAALKLLTNGRVPSDCAVCLDPFDDDETLRFIPKCQHAFHPSCLDP 287
GLDPAA+AALP+ +A ++ +G +CAVCL FDD + LR +P+C HAFHP C+DP
Sbjct: 71 GLDPAALAALPVVPYAEIRKHKSGGGVLECAVCLTAFDDGDELRLLPQCSHAFHPECIDP 130
Query: 288 WLEAHTTCPSCRASLVQPAPDSTGPQPAPELTRSYDVVIAVDSAEIEQE 434
WLE H TCP CR +L +P P + +P ++ + V + ++ E +E
Sbjct: 131 WLEGHVTCPLCRGNLEKPVPLPSPDKPPRQMPEAVAVRVEAENDEERKE 179
>ref|XP_002452317.1| hypothetical protein SORBIDRAFT_04g023600 [Sorghum bicolor]
gi|241932148|gb|EES05293.1| hypothetical protein
SORBIDRAFT_04g023600 [Sorghum bicolor]
Length = 378
Score = 105 bits (263), Expect = 8e-21
Identities = 52/114 (45%), Positives = 68/114 (59%), Gaps = 5/114 (4%)
Frame = +3
Query: 108 GLDPAAVAALPIDHFAALKLLTNGRVPSDCAVCLDPFDDDETLRFIPKCQHAFHPSCLDP 287
GLDPAAVA LPI +A ++ +G +CAVCL FDD + LR +P+C HAFHP C+DP
Sbjct: 102 GLDPAAVALLPILPYAEIRKHKSGGGVLECAVCLTAFDDGDELRLLPQCSHAFHPDCIDP 161
Query: 288 WLEAHTTCPSCRASLVQ-----PAPDSTGPQPAPELTRSYDVVIAVDSAEIEQE 434
WLE H TCP CRA+L + PA + P+ P T + V E+E +
Sbjct: 162 WLEDHITCPLCRANLERPVMPPPAASLSSPETKPLQTTLEAAGVTVRVVEVEND 215
>dbj|BAK03766.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 404
Score = 105 bits (262), Expect = 1e-20
Identities = 53/112 (47%), Positives = 67/112 (59%), Gaps = 1/112 (0%)
Frame = +3
Query: 102 LAGLDPAAVAALPIDHFAALKLLTNGRVPSDCAVCLDPFDDDETLRFIPKCQHAFHPSCL 281
+ GLDPAA+ ALP +A +K G+ +CAVCL FDDD+TLR +PKC HAFH C+
Sbjct: 108 MRGLDPAALEALPTMAYADVKAHKVGKGELECAVCLSEFDDDDTLRLLPKCSHAFHADCI 167
Query: 282 DPWLEAHTTCPSCRASLVQPAPD-STGPQPAPELTRSYDVVIAVDSAEIEQE 434
D WL +H TCP CRA+LV A + A T DVV A + + QE
Sbjct: 168 DAWLASHVTCPVCRANLVPGAEALAASAAAATSATPERDVVAATSAPQPAQE 219
>ref|XP_006471949.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-like [Citrus sinensis]
Length = 443
Score = 104 bits (259), Expect = 2e-20
Identities = 49/110 (44%), Positives = 66/110 (60%)
Frame = +3
Query: 108 GLDPAAVAALPIDHFAALKLLTNGRVPSDCAVCLDPFDDDETLRFIPKCQHAFHPSCLDP 287
GLD + P ++ +K L G+ +CAVCL+ F+DDETLR IPKC H FHP C+D
Sbjct: 165 GLDREVIDTFPTFVYSDVKTLKVGKGALECAVCLNEFEDDETLRLIPKCDHVFHPECIDA 224
Query: 288 WLEAHTTCPSCRASLVQPAPDSTGPQPAPELTRSYDVVIAVDSAEIEQEP 437
WLE+HTTCP CR++L P T PQP+ + D+ D+A + P
Sbjct: 225 WLESHTTCPVCRSNLAS-EPGETTPQPSELGSSEVDLEAQNDAAVAAETP 273
>ref|XP_006433262.1| hypothetical protein CICLE_v10001478mg [Citrus clementina]
gi|557535384|gb|ESR46502.1| hypothetical protein
CICLE_v10001478mg [Citrus clementina]
Length = 384
Score = 104 bits (259), Expect = 2e-20
Identities = 49/110 (44%), Positives = 66/110 (60%)
Frame = +3
Query: 108 GLDPAAVAALPIDHFAALKLLTNGRVPSDCAVCLDPFDDDETLRFIPKCQHAFHPSCLDP 287
GLD + P ++ +K L G+ +CAVCL+ F+DDETLR IPKC H FHP C+D
Sbjct: 106 GLDREVIDTFPTFVYSDVKTLKVGKGALECAVCLNEFEDDETLRLIPKCDHVFHPECIDA 165
Query: 288 WLEAHTTCPSCRASLVQPAPDSTGPQPAPELTRSYDVVIAVDSAEIEQEP 437
WLE+HTTCP CR++L P T PQP+ + D+ D+A + P
Sbjct: 166 WLESHTTCPVCRSNLAS-EPGETTPQPSELGSSEVDLEAQNDAAVAAETP 214
>ref|NP_001047194.1| Os02g0572200 [Oryza sativa Japonica Group]
gi|46806007|dbj|BAD17281.1| putative RING-H2 zinc finger
protein ATL6 [Oryza sativa Japonica Group]
gi|113536725|dbj|BAF09108.1| Os02g0572200 [Oryza sativa
Japonica Group] gi|215766504|dbj|BAG98812.1| unnamed
protein product [Oryza sativa Japonica Group]
Length = 349
Score = 103 bits (257), Expect = 4e-20
Identities = 52/96 (54%), Positives = 64/96 (66%), Gaps = 2/96 (2%)
Frame = +3
Query: 108 GLDPAAVAALPIDHFAAL-KLLTNGRVPSDCAVCLDPFDDDETLRFIPKCQHAFHPSCLD 284
GLDPAAVAA+P+ +A + K + G +CAVCL FDD + LR +P+C HAFHP C+D
Sbjct: 93 GLDPAAVAAIPVVPYAEVRKHRSGGGGALECAVCLTVFDDGDDLRLLPQCSHAFHPDCID 152
Query: 285 PWLEAHTTCPSCRASL-VQPAPDSTGPQPAPELTRS 389
PWLE H TCP CRA+L QPAP PA E + S
Sbjct: 153 PWLEGHVTCPLCRANLEKQPAPS----PPAVEFSSS 184
>gb|ABR16339.1| unknown [Picea sitchensis]
Length = 467
Score = 103 bits (257), Expect = 4e-20
Identities = 52/111 (46%), Positives = 66/111 (59%), Gaps = 7/111 (6%)
Frame = +3
Query: 108 GLDPAAVAALPIDHFAALK-LLTNGRVPSDCAVCLDPFDDDETLRFIPKCQHAFHPSCLD 284
GLD A + + P+ + +K L + +CAVCL F+DDE LR +PKC HAFHP C+D
Sbjct: 117 GLDRAVIESFPVFSYDLVKGLKAQTKETLECAVCLSEFEDDEQLRLLPKCSHAFHPDCID 176
Query: 285 PWLEAHTTCPSCRASLVQPAPDST------GPQPAPELTRSYDVVIAVDSA 419
WL +HTTCP CR SL PA D G PE+T SY+V + VD A
Sbjct: 177 TWLFSHTTCPVCRTSLA-PADDGNPTGTGYGIIEPPEITPSYEVAVVVDGA 226
>ref|NP_001142103.1| uncharacterized LOC100274267 precursor [Zea mays]
gi|194707124|gb|ACF87646.1| unknown [Zea mays]
gi|414589721|tpg|DAA40292.1| TPA: putative RING zinc
finger domain superfamily protein [Zea mays]
Length = 393
Score = 103 bits (257), Expect = 4e-20
Identities = 46/89 (51%), Positives = 57/89 (64%)
Frame = +3
Query: 108 GLDPAAVAALPIDHFAALKLLTNGRVPSDCAVCLDPFDDDETLRFIPKCQHAFHPSCLDP 287
GLD A + + P +A +K G+ +CAVCL FDDDETLR +PKC H FHP C+D
Sbjct: 106 GLDEAVLESFPTMAYADVKAHKAGKGALECAVCLSEFDDDETLRLLPKCSHVFHPDCIDT 165
Query: 288 WLEAHTTCPSCRASLVQPAPDSTGPQPAP 374
WL +H TCP CRA+LV PD+ P P P
Sbjct: 166 WLASHVTCPVCRANLV---PDANAPPPPP 191
>gb|EAY86372.1| hypothetical protein OsI_07750 [Oryza sativa Indica Group]
Length = 348
Score = 103 bits (257), Expect = 4e-20
Identities = 52/96 (54%), Positives = 64/96 (66%), Gaps = 2/96 (2%)
Frame = +3
Query: 108 GLDPAAVAALPIDHFAAL-KLLTNGRVPSDCAVCLDPFDDDETLRFIPKCQHAFHPSCLD 284
GLDPAAVAA+P+ +A + K + G +CAVCL FDD + LR +P+C HAFHP C+D
Sbjct: 92 GLDPAAVAAIPVVPYAEVRKHRSGGGGALECAVCLTVFDDGDDLRLLPQCSHAFHPDCID 151
Query: 285 PWLEAHTTCPSCRASL-VQPAPDSTGPQPAPELTRS 389
PWLE H TCP CRA+L QPAP PA E + S
Sbjct: 152 PWLEGHVTCPLCRANLEKQPAPS----PPAVEFSSS 183
>ref|XP_003581296.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-like [Brachypodium
distachyon]
Length = 340
Score = 103 bits (256), Expect = 5e-20
Identities = 52/122 (42%), Positives = 67/122 (54%), Gaps = 13/122 (10%)
Frame = +3
Query: 108 GLDPAAVAALPIDHFAALKLLTNGRVPSDCAVCLDPFDDDETLRFIPKCQHAFHPSCLDP 287
GLDPA VA PI + +K GR +CAVCL F++ + LR +P C HAFHP C+DP
Sbjct: 56 GLDPAVVATFPIMPYREIKEHKIGRGVLECAVCLTAFEEGDDLRLLPHCSHAFHPECIDP 115
Query: 288 WLEAHTTCPSCRASL-------------VQPAPDSTGPQPAPELTRSYDVVIAVDSAEIE 428
WLEA TCP CRA+L P+P+ P PAP + V +A+ E E
Sbjct: 116 WLEARVTCPLCRANLEKPPPPPTAAAVVTPPSPEQMAPSPAPS-PPPHAVAVAIPVREEE 174
Query: 429 QE 434
+E
Sbjct: 175 EE 176
>ref|XP_002462520.1| hypothetical protein SORBIDRAFT_02g027200 [Sorghum bicolor]
gi|241925897|gb|EER99041.1| hypothetical protein
SORBIDRAFT_02g027200 [Sorghum bicolor]
Length = 412
Score = 102 bits (255), Expect = 7e-20
Identities = 48/94 (51%), Positives = 59/94 (62%), Gaps = 3/94 (3%)
Frame = +3
Query: 108 GLDPAAVAALPIDHFAALKLLTNGRVPSDCAVCLDPFDDDETLRFIPKCQHAFHPSCLDP 287
GLD A + + P +A +K G+ +CAVCL FDDDETLR +PKC H FHP C+D
Sbjct: 105 GLDAAVLESFPTMAYADVKAHKAGKGALECAVCLSEFDDDETLRLLPKCSHVFHPDCIDT 164
Query: 288 WLEAHTTCPSCRASLVQPAPDSTGP---QPAPEL 380
WL +H TCP CRA+LV A D+ P APEL
Sbjct: 165 WLASHVTCPVCRANLVPGADDNAPPADGDDAPEL 198
>gb|EAZ23518.1| hypothetical protein OsJ_07214 [Oryza sativa Japonica Group]
Length = 265
Score = 102 bits (255), Expect = 7e-20
Identities = 48/82 (58%), Positives = 59/82 (71%), Gaps = 2/82 (2%)
Frame = +3
Query: 108 GLDPAAVAALPIDHFAAL-KLLTNGRVPSDCAVCLDPFDDDETLRFIPKCQHAFHPSCLD 284
GLDPAAVAA+P+ +A + K + G +CAVCL FDD + LR +P+C HAFHP C+D
Sbjct: 93 GLDPAAVAAIPVVPYAEVRKHRSGGGGALECAVCLTVFDDGDDLRLLPQCSHAFHPDCID 152
Query: 285 PWLEAHTTCPSCRASL-VQPAP 347
PWLE H TCP CRA+L QPAP
Sbjct: 153 PWLEGHVTCPLCRANLEKQPAP 174
>ref|XP_006827939.1| hypothetical protein AMTR_s00008p00185200 [Amborella trichopoda]
gi|548832574|gb|ERM95355.1| hypothetical protein
AMTR_s00008p00185200 [Amborella trichopoda]
Length = 391
Score = 102 bits (254), Expect = 9e-20
Identities = 45/91 (49%), Positives = 60/91 (65%), Gaps = 1/91 (1%)
Frame = +3
Query: 108 GLDPAAVAALPIDHFAALKLLTNGRVPSDCAVCLDPFDDDETLRFIPKCQHAFHPSCLDP 287
GLDPA + P ++ +K L G+ +CAVCL F+DDE+LR IP C H FHP C+D
Sbjct: 97 GLDPAIIETFPTLVYSVVKGLKIGKGTLECAVCLSEFEDDESLRLIPNCSHVFHPECIDE 156
Query: 288 WLEAHTTCPSCRASL-VQPAPDSTGPQPAPE 377
WL +H TCP CRA+L V P PD+ P+ +P+
Sbjct: 157 WLASHVTCPLCRANLTVPPPPDTKLPENSPD 187
>ref|XP_006648767.1| PREDICTED: E3 ubiquitin-protein ligase ATL31-like [Oryza
brachyantha]
Length = 176
Score = 102 bits (253), Expect = 1e-19
Identities = 44/80 (55%), Positives = 58/80 (72%)
Frame = +3
Query: 108 GLDPAAVAALPIDHFAALKLLTNGRVPSDCAVCLDPFDDDETLRFIPKCQHAFHPSCLDP 287
GLDPAAVAA+P+ +A ++ +G + +CAVCL FDD + LR +P+C HAFHP C+DP
Sbjct: 93 GLDPAAVAAIPVVPYAEVRKHRSGGL--ECAVCLTAFDDADDLRLLPRCSHAFHPDCIDP 150
Query: 288 WLEAHTTCPSCRASLVQPAP 347
WLE H TCP CRA+L + P
Sbjct: 151 WLEGHVTCPLCRANLEKQPP 170
>ref|XP_006382625.1| hypothetical protein POPTR_0005s03900g [Populus trichocarpa]
gi|550337989|gb|ERP60422.1| hypothetical protein
POPTR_0005s03900g [Populus trichocarpa]
Length = 385
Score = 102 bits (253), Expect = 1e-19
Identities = 46/96 (47%), Positives = 60/96 (62%)
Frame = +3
Query: 108 GLDPAAVAALPIDHFAALKLLTNGRVPSDCAVCLDPFDDDETLRFIPKCQHAFHPSCLDP 287
GLDPA + P ++ +K L G+ +CAVCL+ F++DETLR IP C H FHP C+
Sbjct: 100 GLDPAVIETFPTLIYSVVKGLKIGKGALECAVCLNEFEEDETLRLIPNCDHVFHPDCIGA 159
Query: 288 WLEAHTTCPSCRASLVQPAPDSTGPQPAPELTRSYD 395
WLE+HTTCP CRA L +PA P+L S+D
Sbjct: 160 WLESHTTCPVCRADLTKPA------DSVPQLGESHD 189
>ref|XP_002319561.2| hypothetical protein POPTR_0013s02670g [Populus trichocarpa]
gi|550324785|gb|EEE95484.2| hypothetical protein
POPTR_0013s02670g [Populus trichocarpa]
Length = 386
Score = 102 bits (253), Expect = 1e-19
Identities = 43/79 (54%), Positives = 53/79 (67%)
Frame = +3
Query: 108 GLDPAAVAALPIDHFAALKLLTNGRVPSDCAVCLDPFDDDETLRFIPKCQHAFHPSCLDP 287
GLDP + P ++ +K L G +CAVCL+ F+DDETLR IP C H FHP C+D
Sbjct: 98 GLDPGVIETFPTLIYSVVKGLKIGNGALECAVCLNEFEDDETLRLIPNCDHVFHPDCIDA 157
Query: 288 WLEAHTTCPSCRASLVQPA 344
WLE+HTTCP CRA L +PA
Sbjct: 158 WLESHTTCPVCRADLTKPA 176
>ref|XP_002328426.1| predicted protein [Populus trichocarpa]
Length = 374
Score = 102 bits (253), Expect = 1e-19
Identities = 46/96 (47%), Positives = 60/96 (62%)
Frame = +3
Query: 108 GLDPAAVAALPIDHFAALKLLTNGRVPSDCAVCLDPFDDDETLRFIPKCQHAFHPSCLDP 287
GLDPA + P ++ +K L G+ +CAVCL+ F++DETLR IP C H FHP C+
Sbjct: 89 GLDPAVIETFPTLIYSVVKGLKIGKGALECAVCLNEFEEDETLRLIPNCDHVFHPDCIGA 148
Query: 288 WLEAHTTCPSCRASLVQPAPDSTGPQPAPELTRSYD 395
WLE+HTTCP CRA L +PA P+L S+D
Sbjct: 149 WLESHTTCPVCRADLTKPA------DSVPQLGESHD 178
>gb|EMS46532.1| E3 ubiquitin-protein ligase ATL6 [Triticum urartu]
Length = 266
Score = 101 bits (252), Expect = 2e-19
Identities = 45/89 (50%), Positives = 56/89 (62%)
Frame = +3
Query: 108 GLDPAAVAALPIDHFAALKLLTNGRVPSDCAVCLDPFDDDETLRFIPKCQHAFHPSCLDP 287
GLDPA VA PI + +K G +CAVCL F+D + LR +P C HAFH C+DP
Sbjct: 95 GLDPAVVATFPIVPYRKIKEHKIGSGALECAVCLTEFEDADDLRLLPHCSHAFHTDCIDP 154
Query: 288 WLEAHTTCPSCRASLVQPAPDSTGPQPAP 374
WLE TTCP CRA+L +P P + P P+P
Sbjct: 155 WLETRTTCPLCRANLEKPPPPAAMPVPSP 183
>ref|XP_003626315.1| RING finger protein [Medicago truncatula]
gi|87240525|gb|ABD32383.1| Zinc finger, RING-type
[Medicago truncatula] gi|355501330|gb|AES82533.1| RING
finger protein [Medicago truncatula]
Length = 361
Score = 101 bits (252), Expect = 2e-19
Identities = 48/109 (44%), Positives = 65/109 (59%)
Frame = +3
Query: 108 GLDPAAVAALPIDHFAALKLLTNGRVPSDCAVCLDPFDDDETLRFIPKCQHAFHPSCLDP 287
GLDP+ + PI ++ +K+ G+ +CAVCL F+D ETLR IPKC H FHP C+D
Sbjct: 91 GLDPSVIETFPILEYSEVKIHKIGKDVLECAVCLMEFEDTETLRLIPKCDHVFHPECIDE 150
Query: 288 WLEAHTTCPSCRASLVQPAPDSTGPQPAPELTRSYDVVIAVDSAEIEQE 434
WL +HTTCP CRA+LV DS P ++ DV D+ ++ E
Sbjct: 151 WLSSHTTCPVCRANLVPQPGDSVHGVPE---SQQQDVEAQNDAVQLPTE 196
>ref|NP_001062080.1| Os08g0484200 [Oryza sativa Japonica Group]
gi|42408167|dbj|BAD09305.1| putative RING-H2 zinc finger
protein [Oryza sativa Japonica Group]
gi|42409391|dbj|BAD10704.1| putative RING-H2 zinc finger
protein [Oryza sativa Japonica Group]
gi|113624049|dbj|BAF23994.1| Os08g0484200 [Oryza sativa
Japonica Group] gi|125561949|gb|EAZ07397.1| hypothetical
protein OsI_29648 [Oryza sativa Indica Group]
gi|215768935|dbj|BAH01164.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 413
Score = 101 bits (252), Expect = 2e-19
Identities = 55/126 (43%), Positives = 70/126 (55%), Gaps = 18/126 (14%)
Frame = +3
Query: 108 GLDPAAVAALPIDHFAALKLLTNGRVPSDCAVCLDPFDDDETLRFIPKCQHAFHPSCLDP 287
GLDPA + A P +A +K G+ +CAVCL FDDDETLR +P+C HAFH C+D
Sbjct: 116 GLDPAVLGAFPTMAYADVKAHKAGKGALECAVCLSEFDDDETLRLLPRCSHAFHADCIDA 175
Query: 288 WLEAHTTCPSCRASL-----VQPAP-------------DSTGPQPAPELTRSYDVVIAVD 413
WL +H TCP CRA+L V P P + PQPA + DVV+A D
Sbjct: 176 WLASHVTCPVCRANLAFDAGVPPPPLAPPHALTTGQDVAAAPPQPAAPEQVTVDVVVA-D 234
Query: 414 SAEIEQ 431
+ E E+
Sbjct: 235 AEETEE 240