BLASTX nr result
ID: Rheum21_contig00028317
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00028317
(404 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004252705.1| PREDICTED: uncharacterized protein LOC101266... 85 2e-27
emb|CAN75700.1| hypothetical protein VITISV_035987 [Vitis vinifera] 67 1e-18
emb|CAN72533.1| hypothetical protein VITISV_007475 [Vitis vinifera] 71 7e-18
emb|CAN74166.1| hypothetical protein VITISV_007721 [Vitis vinifera] 66 9e-18
ref|XP_006605035.1| PREDICTED: uncharacterized protein LOC102664... 76 3e-17
emb|CAN82859.1| hypothetical protein VITISV_025377 [Vitis vinifera] 70 1e-16
emb|CAN83506.1| hypothetical protein VITISV_027576 [Vitis vinifera] 64 3e-16
emb|CBI31290.3| unnamed protein product [Vitis vinifera] 69 8e-16
emb|CAN77680.1| hypothetical protein VITISV_040762 [Vitis vinifera] 61 3e-15
gb|EOY32308.1| Uncharacterized protein TCM_040047 [Theobroma cacao] 62 5e-15
emb|CDH30699.1| putative Ty1-copia-like retrotransposon [Cercis ... 70 5e-15
gb|AAK62788.1|AC027036_9 polyprotein, putative [Arabidopsis thal... 66 1e-14
dbj|BAK41511.1| polyprotein [Arabidopsis thaliana] 66 1e-14
gb|AAK62793.1|AC027036_14 polyprotein, putative [Arabidopsis tha... 66 1e-14
dbj|BAA78423.1| polyprotein [Arabidopsis thaliana] 66 1e-14
dbj|BAK41512.1| C-end truncated polyprotein [Arabidopsis thaliana] 66 1e-14
dbj|BAA87949.1| retrotransposon homolog, partial [Arabidopsis th... 66 1e-14
dbj|BAB10876.1| polyprotein [Arabidopsis thaliana] 64 2e-14
emb|CAN79733.1| hypothetical protein VITISV_016615 [Vitis vinifera] 57 2e-14
emb|CAN82540.1| hypothetical protein VITISV_015270 [Vitis vinifera] 62 2e-14
>ref|XP_004252705.1| PREDICTED: uncharacterized protein LOC101266915 [Solanum
lycopersicum]
Length = 544
Score = 84.7 bits (208), Expect(2) = 2e-27
Identities = 41/75 (54%), Positives = 50/75 (66%)
Frame = -1
Query: 401 LSMHSDYTGNDGLQVGNGMSLPITHLGSQILPASPLPILLCNILFVPQIKKSLLSVAQLT 222
LS+H DY G D L +GNG L I H+GS L + P+ L IL VP I KSLLSV+Q T
Sbjct: 360 LSIHMDYNGEDQLALGNGQKLSINHIGSSKLSCATRPLHLNKILHVPSITKSLLSVSQFT 419
Query: 221 KDNNAYMVFYPTCYF 177
KDNN +M F+P+C F
Sbjct: 420 KDNNVFMEFHPSCCF 434
Score = 63.5 bits (153), Expect(2) = 2e-27
Identities = 31/63 (49%), Positives = 45/63 (71%), Gaps = 4/63 (6%)
Frame = -2
Query: 178 FVKDLQGRTLLKGTVENGLYQLQ----PSTTSSKPLSCAFLGAKTTMQHWHERLGHPHES 11
FVKD QG+ LL+G++++GLY+ P +SS P AF+ ++ ++Q WHERLGHPHE
Sbjct: 434 FVKDPQGKILLRGSIDDGLYRFDGGGLPVISSSTPR--AFVISRASLQAWHERLGHPHEQ 491
Query: 10 VLR 2
+LR
Sbjct: 492 LLR 494
>emb|CAN75700.1| hypothetical protein VITISV_035987 [Vitis vinifera]
Length = 1099
Score = 67.0 bits (162), Expect(2) = 1e-18
Identities = 31/74 (41%), Positives = 46/74 (62%)
Frame = -1
Query: 401 LSMHSDYTGNDGLQVGNGMSLPITHLGSQILPASPLPILLCNILFVPQIKKSLLSVAQLT 222
LSMH+ Y G+D + +G+G L ITH+GS L + L N+L VP +KK+L+S++Q
Sbjct: 409 LSMHTPYNGSDDIMIGDGSGLSITHIGSSSLHTTHNTFKLNNVLCVPTMKKNLISISQFC 468
Query: 221 KDNNAYMVFYPTCY 180
NN + F PT +
Sbjct: 469 TSNNVSIEFLPTAF 482
Score = 51.6 bits (122), Expect(2) = 1e-18
Identities = 29/66 (43%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Frame = -2
Query: 196 FTLLAIFVKDLQGRT-LLKGTVENGLYQLQPSTTSSKPLSCAFLGAKTTMQHWHERLGHP 20
F A VKD+Q RT LLKG ++G+Y+ S P AF KTT+ WH+RLGHP
Sbjct: 477 FLPTAFLVKDIQTRTTLLKGNTKDGVYEWPIS-----PPLLAFSSRKTTLSEWHQRLGHP 531
Query: 19 HESVLR 2
+L+
Sbjct: 532 TFKILK 537
>emb|CAN72533.1| hypothetical protein VITISV_007475 [Vitis vinifera]
Length = 499
Score = 70.9 bits (172), Expect(2) = 7e-18
Identities = 31/74 (41%), Positives = 50/74 (67%)
Frame = -1
Query: 401 LSMHSDYTGNDGLQVGNGMSLPITHLGSQILPASPLPILLCNILFVPQIKKSLLSVAQLT 222
LS+H+ YTG+D + +G+G L I+H GS LP+S L ++L+V +KK+L+S++Q
Sbjct: 361 LSLHAPYTGSDDVMIGDGTGLLISHTGSAFLPSSTTTFTLNDVLYVSSMKKNLISISQFC 420
Query: 221 KDNNAYMVFYPTCY 180
NNA + F P+C+
Sbjct: 421 ISNNASVEFLPSCF 434
Score = 45.1 bits (105), Expect(2) = 7e-18
Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Frame = -2
Query: 175 VKDLQ-GRTLLKGTVENGLYQLQPSTTSSKPLSCAFLGAKTTMQHWHERLGHPHESVLR 2
VKDL+ G LL G ++G+Y+ + + P+ AF KTT +WH RLGHP +L+
Sbjct: 436 VKDLRIGAILLTGNTKDGVYEWPAAQPAFSPI-LAFSHVKTTSSNWHHRLGHPVFPILK 493
>emb|CAN74166.1| hypothetical protein VITISV_007721 [Vitis vinifera]
Length = 631
Score = 66.2 bits (160), Expect(2) = 9e-18
Identities = 31/72 (43%), Positives = 45/72 (62%)
Frame = -1
Query: 401 LSMHSDYTGNDGLQVGNGMSLPITHLGSQILPASPLPILLCNILFVPQIKKSLLSVAQLT 222
LSMH+ Y G+D + +G+G L ITH GS L + L N+L+VP +KK+L+S++Q
Sbjct: 31 LSMHTPYNGSDDIMIGDGSGLSITHTGSSSLHTTHNTFKLNNVLYVPTMKKNLISISQFG 90
Query: 221 KDNNAYMVFYPT 186
NN + F PT
Sbjct: 91 TSNNVSIEFLPT 102
Score = 49.3 bits (116), Expect(2) = 9e-18
Identities = 28/66 (42%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Frame = -2
Query: 196 FTLLAIFVKDLQ-GRTLLKGTVENGLYQLQPSTTSSKPLSCAFLGAKTTMQHWHERLGHP 20
F A+ VKD+Q G TLLKG ++G+ + S P AF KTT+ WH+RLGHP
Sbjct: 99 FLPTALLVKDIQTGITLLKGNTKDGVNEWPVS-----PPLLAFSSLKTTLSEWHQRLGHP 153
Query: 19 HESVLR 2
+L+
Sbjct: 154 AFKILK 159
>ref|XP_006605035.1| PREDICTED: uncharacterized protein LOC102664868 [Glycine max]
Length = 471
Score = 75.9 bits (185), Expect(2) = 3e-17
Identities = 38/81 (46%), Positives = 55/81 (67%)
Frame = -1
Query: 401 LSMHSDYTGNDGLQVGNGMSLPITHLGSQILPASPLPILLCNILFVPQIKKSLLSVAQLT 222
L++ +DYT +D LQVGNG L I+H+GS +LP LP ++ VP + K+LLSV++LT
Sbjct: 350 LTIANDYTDDDKLQVGNGKHLSISHVGSSLLPNLSLP----SVFIVPNLTKNLLSVSKLT 405
Query: 221 KDNNAYMVFYPTCYFC*GFAG 159
+DN+ +M F+PT F F G
Sbjct: 406 RDNDVFMEFWPTYCFVKNFQG 426
Score = 37.7 bits (86), Expect(2) = 3e-17
Identities = 16/28 (57%), Positives = 22/28 (78%)
Frame = -2
Query: 178 FVKDLQGRTLLKGTVENGLYQLQPSTTS 95
FVK+ QG+TLL+G + +GLYQL P T+
Sbjct: 420 FVKNFQGQTLLQGDISHGLYQLPPVKTN 447
>emb|CAN82859.1| hypothetical protein VITISV_025377 [Vitis vinifera]
Length = 1578
Score = 70.5 bits (171), Expect(2) = 1e-16
Identities = 32/74 (43%), Positives = 50/74 (67%)
Frame = -1
Query: 401 LSMHSDYTGNDGLQVGNGMSLPITHLGSQILPASPLPILLCNILFVPQIKKSLLSVAQLT 222
L ++ +Y G D + +G+G LP++H+GS L +S LC+ LFVP+I+K+L+SV T
Sbjct: 278 LLINFEYDGTDEVVIGDGSGLPVSHIGSLSLASSNRVFHLCDTLFVPRIQKNLISVHHFT 337
Query: 221 KDNNAYMVFYPTCY 180
K NN Y+ F+PT +
Sbjct: 338 KHNNVYLEFHPTYF 351
Score = 41.6 bits (96), Expect(2) = 1e-16
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = -2
Query: 175 VKD-LQGRTLLKGTVENGLYQLQPSTTSSKPLSCAFLGAKTTMQHWHERLGHPHESVL 5
VKD + G LLKG E+G+Y + A++ +TT WH+RLGHP ++
Sbjct: 353 VKDQITGAILLKGKCEDGVYPFPKHLPPNSKNVVAYVHERTTPDGWHKRLGHPSSKLV 410
>emb|CAN83506.1| hypothetical protein VITISV_027576 [Vitis vinifera]
Length = 1172
Score = 64.3 bits (155), Expect(2) = 3e-16
Identities = 30/74 (40%), Positives = 46/74 (62%)
Frame = -1
Query: 401 LSMHSDYTGNDGLQVGNGMSLPITHLGSQILPASPLPILLCNILFVPQIKKSLLSVAQLT 222
LS+H+ Y G+D + + +G LPITH GS L S L N+L VP +KK+L+S+++L
Sbjct: 250 LSIHAPYNGSDDIMIDDGTGLPITHTGSLSLHTSNAQFSLTNVLCVPGMKKNLISISKLX 309
Query: 221 KDNNAYMVFYPTCY 180
NN + F P+ +
Sbjct: 310 ISNNVSITFLPSSF 323
Score = 46.2 bits (108), Expect(2) = 3e-16
Identities = 28/67 (41%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Frame = -2
Query: 199 SFTLLAIFVKDLQ-GRTLLKGTVENGLYQLQPSTTSSKPLSCAFLGAKTTMQHWHERLGH 23
+F + VKDL+ G TLLKG ++G+Y+ S+ PL AF KT+ WH RLGH
Sbjct: 317 TFLPSSFLVKDLRTGATLLKGKTKDGVYEWLVSS----PL-LAFSSVKTSSSEWHHRLGH 371
Query: 22 PHESVLR 2
P +L+
Sbjct: 372 PAFPILK 378
>emb|CBI31290.3| unnamed protein product [Vitis vinifera]
Length = 1201
Score = 69.3 bits (168), Expect(2) = 8e-16
Identities = 31/69 (44%), Positives = 44/69 (63%)
Frame = -1
Query: 383 YTGNDGLQVGNGMSLPITHLGSQILPASPLPILLCNILFVPQIKKSLLSVAQLTKDNNAY 204
Y G D + V NG SLPIT +G L S P +L N+L+VPQ+ +L+SV++ DNN
Sbjct: 469 YNGTDSVMVDNGKSLPITQVGHSFLHTSAKPFVLHNVLYVPQLTSNLISVSKFCTDNNTI 528
Query: 203 MVFYPTCYF 177
M F+P+ +F
Sbjct: 529 MEFHPSSFF 537
Score = 39.7 bits (91), Expect(2) = 8e-16
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Frame = -2
Query: 184 AIFVKDLQGR-TLLKGTVENGLYQLQPSTTSSKPLSC---AFL-GAKTTMQHWHERLGHP 20
+ FVKD + TLL+G +E GLY+ S+ SS S FL + T WH++ GHP
Sbjct: 535 SFFVKDKDTKVTLLQGQLERGLYKFPTSSISSPTASLKHQVFLTKTQPTTMLWHQQFGHP 594
Query: 19 HESVLR 2
+L+
Sbjct: 595 SAVILQ 600
>emb|CAN77680.1| hypothetical protein VITISV_040762 [Vitis vinifera]
Length = 590
Score = 60.8 bits (146), Expect(2) = 3e-15
Identities = 31/74 (41%), Positives = 42/74 (56%)
Frame = -1
Query: 401 LSMHSDYTGNDGLQVGNGMSLPITHLGSQILPASPLPILLCNILFVPQIKKSLLSVAQLT 222
L HS+Y G D + +G+G LPITH GS L + + L VP I K+L+SV T
Sbjct: 314 LQFHSEYDGTDEVIIGDGSGLPITHSGSLTLSFPNRKFQVEDTLCVPTINKNLISVHHFT 373
Query: 221 KDNNAYMVFYPTCY 180
K NN + F+PT +
Sbjct: 374 KQNNVILEFHPTYF 387
Score = 46.2 bits (108), Expect(2) = 3e-15
Identities = 25/58 (43%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Frame = -2
Query: 175 VKDLQ-GRTLLKGTVENGLYQLQPSTTSSKPLSCAFLGAKTTMQHWHERLGHPHESVL 5
VKD + G LL+G ENG+Y + PS+ ++ P+ AF+ +T++ WH+RLGHP V+
Sbjct: 389 VKDRRTGEILLQGPCENGVYPM-PSSPAATPI--AFVHERTSVTGWHQRLGHPSFKVV 443
>gb|EOY32308.1| Uncharacterized protein TCM_040047 [Theobroma cacao]
Length = 678
Score = 62.0 bits (149), Expect(2) = 5e-15
Identities = 26/71 (36%), Positives = 47/71 (66%)
Frame = -1
Query: 401 LSMHSDYTGNDGLQVGNGMSLPITHLGSQILPASPLPILLCNILFVPQIKKSLLSVAQLT 222
LS++++Y G + + VG G SL I H+G I+ + P+ L N+L VP + ++L+S+++
Sbjct: 58 LSLYTEYGGLEKIAVGGGTSLSINHIGFSIISTTNKPLKLTNVLHVPVMNRNLISISKFC 117
Query: 221 KDNNAYMVFYP 189
K NN ++ F+P
Sbjct: 118 KTNNVFVEFFP 128
Score = 44.3 bits (103), Expect(2) = 5e-15
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = -2
Query: 175 VKDLQ-GRTLLKGTVENGLYQLQPSTTSSKPLSCAFLGAKTTMQHWHERLGHPHESVL 5
VKD G L++ NGLY+L + ++ FL KT+ WH RLGHP +L
Sbjct: 133 VKDSSMGAPLVRSLNRNGLYELPRCMSHLSMITTTFLSVKTSFDVWHRRLGHPSSEIL 190
>emb|CDH30699.1| putative Ty1-copia-like retrotransposon [Cercis chinensis]
Length = 646
Score = 70.5 bits (171), Expect(2) = 5e-15
Identities = 33/74 (44%), Positives = 50/74 (67%)
Frame = -1
Query: 401 LSMHSDYTGNDGLQVGNGMSLPITHLGSQILPASPLPILLCNILFVPQIKKSLLSVAQLT 222
LS+H+ ++G+D + VGNG L + H G +P S +LL N+L VP+I +L+SV +L
Sbjct: 384 LSLHNPFSGDDKVIVGNGKGLYVLHTGHSSIPTSQGALLLKNVLHVPKIAANLVSVQKLC 443
Query: 221 KDNNAYMVFYPTCY 180
DNNAY+ FYP+ +
Sbjct: 444 HDNNAYVEFYPSYF 457
Score = 35.8 bits (81), Expect(2) = 5e-15
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 8/65 (12%)
Frame = -2
Query: 175 VKDLQGRT-LLKGTVENGLYQLQPSTTSSKPLSCAFLGAKTT-------MQHWHERLGHP 20
VKD + + LLKG ++ GLY + + +S P + F T+ M+ WH RLGHP
Sbjct: 459 VKDQKTQAILLKGGLDKGLYSVPSAYSSHAPQARVFQIFSTSSSTSIDSMRLWHNRLGHP 518
Query: 19 HESVL 5
+++
Sbjct: 519 SLAIV 523
>gb|AAK62788.1|AC027036_9 polyprotein, putative [Arabidopsis thaliana]
gi|18265373|dbj|BAB84015.1| polyprotein [Arabidopsis
thaliana]
Length = 1466
Score = 65.9 bits (159), Expect(2) = 1e-14
Identities = 31/74 (41%), Positives = 45/74 (60%)
Frame = -1
Query: 401 LSMHSDYTGNDGLQVGNGMSLPITHLGSQILPASPLPILLCNILFVPQIKKSLLSVAQLT 222
LS+H YTG D + V +G ++PI+H GS L P+ L NIL+VP I K+L+SV +L
Sbjct: 348 LSLHQPYTGGDDVMVADGSTIPISHTGSTSLSTKSRPLNLHNILYVPNIHKNLISVYRLC 407
Query: 221 KDNNAYMVFYPTCY 180
N + F+P +
Sbjct: 408 NANGVSVEFFPASF 421
Score = 39.3 bits (90), Expect(2) = 1e-14
Identities = 26/59 (44%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Frame = -2
Query: 175 VKDLQ-GRTLLKGTVENGLYQLQPSTTSSKPLSC-AFLGAKTTMQHWHERLGHPHESVL 5
VKDL G LL+G ++ LY+ SS+P+S A +K T WH RLGHP S+L
Sbjct: 423 VKDLNTGVPLLQGKTKDELYEWP--IASSQPVSLFASPSSKATHSSWHARLGHPAPSIL 479
>dbj|BAK41511.1| polyprotein [Arabidopsis thaliana]
Length = 1466
Score = 65.9 bits (159), Expect(2) = 1e-14
Identities = 31/74 (41%), Positives = 45/74 (60%)
Frame = -1
Query: 401 LSMHSDYTGNDGLQVGNGMSLPITHLGSQILPASPLPILLCNILFVPQIKKSLLSVAQLT 222
LS+H YTG D + V +G ++PI+H GS L P+ L NIL+VP I K+L+SV +L
Sbjct: 348 LSLHQPYTGGDDVMVADGSTIPISHTGSTSLSTKSRPLNLHNILYVPNIHKNLISVYRLC 407
Query: 221 KDNNAYMVFYPTCY 180
N + F+P +
Sbjct: 408 NANGVSVEFFPASF 421
Score = 39.3 bits (90), Expect(2) = 1e-14
Identities = 26/59 (44%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Frame = -2
Query: 175 VKDLQ-GRTLLKGTVENGLYQLQPSTTSSKPLSC-AFLGAKTTMQHWHERLGHPHESVL 5
VKDL G LL+G ++ LY+ SS+P+S A +K T WH RLGHP S+L
Sbjct: 423 VKDLNTGVPLLQGKTKDELYEWP--IASSQPVSLFASPSSKATHSSWHARLGHPAPSIL 479
>gb|AAK62793.1|AC027036_14 polyprotein, putative [Arabidopsis thaliana]
gi|338746561|dbj|BAK41510.1| polyprotein [Arabidopsis
thaliana]
Length = 1466
Score = 65.9 bits (159), Expect(2) = 1e-14
Identities = 31/74 (41%), Positives = 45/74 (60%)
Frame = -1
Query: 401 LSMHSDYTGNDGLQVGNGMSLPITHLGSQILPASPLPILLCNILFVPQIKKSLLSVAQLT 222
LS+H YTG D + V +G ++PI+H GS L P+ L NIL+VP I K+L+SV +L
Sbjct: 348 LSLHQPYTGGDDVMVADGSTIPISHTGSTSLSTKSRPLNLHNILYVPNIHKNLISVYRLC 407
Query: 221 KDNNAYMVFYPTCY 180
N + F+P +
Sbjct: 408 NANGVSVEFFPASF 421
Score = 39.3 bits (90), Expect(2) = 1e-14
Identities = 26/59 (44%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Frame = -2
Query: 175 VKDLQ-GRTLLKGTVENGLYQLQPSTTSSKPLSC-AFLGAKTTMQHWHERLGHPHESVL 5
VKDL G LL+G ++ LY+ SS+P+S A +K T WH RLGHP S+L
Sbjct: 423 VKDLNTGVPLLQGKTKDELYEWP--IASSQPVSLFASPSSKATHSSWHARLGHPAPSIL 479
>dbj|BAA78423.1| polyprotein [Arabidopsis thaliana]
Length = 1431
Score = 65.9 bits (159), Expect(2) = 1e-14
Identities = 31/74 (41%), Positives = 45/74 (60%)
Frame = -1
Query: 401 LSMHSDYTGNDGLQVGNGMSLPITHLGSQILPASPLPILLCNILFVPQIKKSLLSVAQLT 222
LS+H YTG D + V +G ++PI+H GS L P+ L NIL+VP I K+L+SV +L
Sbjct: 313 LSLHQPYTGGDDVMVADGSTIPISHTGSTSLSTKSRPLNLHNILYVPNIHKNLISVYRLC 372
Query: 221 KDNNAYMVFYPTCY 180
N + F+P +
Sbjct: 373 NANGVSVEFFPASF 386
Score = 39.3 bits (90), Expect(2) = 1e-14
Identities = 26/59 (44%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Frame = -2
Query: 175 VKDLQ-GRTLLKGTVENGLYQLQPSTTSSKPLSC-AFLGAKTTMQHWHERLGHPHESVL 5
VKDL G LL+G ++ LY+ SS+P+S A +K T WH RLGHP S+L
Sbjct: 388 VKDLNTGVPLLQGKTKDELYEWP--IASSQPVSLFASPSSKATHSSWHARLGHPAPSIL 444
>dbj|BAK41512.1| C-end truncated polyprotein [Arabidopsis thaliana]
Length = 1048
Score = 65.9 bits (159), Expect(2) = 1e-14
Identities = 31/74 (41%), Positives = 45/74 (60%)
Frame = -1
Query: 401 LSMHSDYTGNDGLQVGNGMSLPITHLGSQILPASPLPILLCNILFVPQIKKSLLSVAQLT 222
LS+H YTG D + V +G ++PI+H GS L P+ L NIL+VP I K+L+SV +L
Sbjct: 343 LSLHQPYTGGDDVMVADGSTIPISHTGSTSLSTKSRPLNLHNILYVPNIHKNLISVYRLC 402
Query: 221 KDNNAYMVFYPTCY 180
N + F+P +
Sbjct: 403 NANGVSVEFFPASF 416
Score = 39.3 bits (90), Expect(2) = 1e-14
Identities = 26/59 (44%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Frame = -2
Query: 175 VKDLQ-GRTLLKGTVENGLYQLQPSTTSSKPLSC-AFLGAKTTMQHWHERLGHPHESVL 5
VKDL G LL+G ++ LY+ SS+P+S A +K T WH RLGHP S+L
Sbjct: 418 VKDLNTGVPLLQGKTKDELYEWP--IASSQPVSLFASPSSKATHSSWHARLGHPAPSIL 474
>dbj|BAA87949.1| retrotransposon homolog, partial [Arabidopsis thaliana]
Length = 847
Score = 65.9 bits (159), Expect(2) = 1e-14
Identities = 31/74 (41%), Positives = 45/74 (60%)
Frame = -1
Query: 401 LSMHSDYTGNDGLQVGNGMSLPITHLGSQILPASPLPILLCNILFVPQIKKSLLSVAQLT 222
LS+H YTG D + V +G ++PI+H GS L P+ L NIL+VP I K+L+SV +L
Sbjct: 313 LSLHQPYTGGDDVMVADGSTIPISHTGSTSLSTKSRPLNLHNILYVPNIHKNLISVYRLC 372
Query: 221 KDNNAYMVFYPTCY 180
N + F+P +
Sbjct: 373 NANGVSVEFFPASF 386
Score = 39.3 bits (90), Expect(2) = 1e-14
Identities = 26/59 (44%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Frame = -2
Query: 175 VKDLQ-GRTLLKGTVENGLYQLQPSTTSSKPLSC-AFLGAKTTMQHWHERLGHPHESVL 5
VKDL G LL+G ++ LY+ SS+P+S A +K T WH RLGHP S+L
Sbjct: 388 VKDLNTGVPLLQGKTKDELYEWP--IASSQPVSLFASPSSKATHSSWHARLGHPAPSIL 444
>dbj|BAB10876.1| polyprotein [Arabidopsis thaliana]
Length = 1429
Score = 63.9 bits (154), Expect(2) = 2e-14
Identities = 29/71 (40%), Positives = 44/71 (61%)
Frame = -1
Query: 401 LSMHSDYTGNDGLQVGNGMSLPITHLGSQILPASPLPILLCNILFVPQIKKSLLSVAQLT 222
LSMH YTG + + + +G LPI+H GS +LP + L +IL+VP + K+L+SV +L
Sbjct: 331 LSMHQPYTGGEEVTIADGSGLPISHTGSALLPTPSRSLALKDILYVPNVSKNLISVYRLC 390
Query: 221 KDNNAYMVFYP 189
N + F+P
Sbjct: 391 NANQVSVEFFP 401
Score = 40.4 bits (93), Expect(2) = 2e-14
Identities = 24/59 (40%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = -2
Query: 175 VKDLQ-GRTLLKGTVENGLYQLQPSTTSSKPLSCAFLGAKTTMQHWHERLGHPHESVLR 2
VKDL G LL+G N LY+ P S + A KT + WH+RLGHP +L+
Sbjct: 406 VKDLNTGARLLQGRTRNELYEW-PVNQKSITILTASPSPKTDLSSWHQRLGHPALPILK 463
>emb|CAN79733.1| hypothetical protein VITISV_016615 [Vitis vinifera]
Length = 807
Score = 56.6 bits (135), Expect(2) = 2e-14
Identities = 28/75 (37%), Positives = 43/75 (57%)
Frame = -1
Query: 401 LSMHSDYTGNDGLQVGNGMSLPITHLGSQILPASPLPILLCNILFVPQIKKSLLSVAQLT 222
LS+HS Y G D + + +G L ITH+GS L + L + VP +KK+L+S++Q
Sbjct: 95 LSLHSPYNGIDDVMIRDGTGLSITHMGSTTLSSPQSTFTLSYVFCVPTMKKNLISISQFC 154
Query: 221 KDNNAYMVFYPTCYF 177
NNA + F + +F
Sbjct: 155 ITNNALVEFLLSSFF 169
Score = 47.8 bits (112), Expect(2) = 2e-14
Identities = 28/66 (42%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Frame = -2
Query: 196 FTLLAIFVKDLQ-GRTLLKGTVENGLYQLQPSTTSSKPLSCAFLGAKTTMQHWHERLGHP 20
F L + FVKDL+ G L +G+ ++G+Y+ TT P+ AF AK T +WH RLGHP
Sbjct: 163 FLLSSFFVKDLRSGAILFQGSTKDGVYEW---TTPKNPI-LAFSTAKITSINWHHRLGHP 218
Query: 19 HESVLR 2
+L+
Sbjct: 219 ALPILQ 224
>emb|CAN82540.1| hypothetical protein VITISV_015270 [Vitis vinifera]
Length = 499
Score = 62.4 bits (150), Expect(2) = 2e-14
Identities = 28/69 (40%), Positives = 45/69 (65%)
Frame = -1
Query: 401 LSMHSDYTGNDGLQVGNGMSLPITHLGSQILPASPLPILLCNILFVPQIKKSLLSVAQLT 222
LS+HS Y G + +G+G +LPITH GS +P S +L N+L VP ++K+L+S+ Q
Sbjct: 314 LSLHSLYQGFHDIMIGDGSTLPITHTGSTTIPTSSRTFILQNVLCVPSMQKNLISIYQFC 373
Query: 221 KDNNAYMVF 195
+N+ ++ F
Sbjct: 374 TNNHVFIEF 382
Score = 42.0 bits (97), Expect(2) = 2e-14
Identities = 30/65 (46%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Frame = -2
Query: 196 FTLLAIFVKDLQ-GRTLLKGTVENGLYQLQ---PSTTSSKPLSCAFLGAKTTMQHWHERL 29
F+L A VKDL G LL G +NG+Y+ PS TSS L AF KTT WH RL
Sbjct: 382 FSLSAFQVKDLNTGAILLMGEPKNGVYEWSTTFPSVTSSPLL--AFSSVKTTSFEWHSRL 439
Query: 28 GHPHE 14
+ E
Sbjct: 440 DNGGE 444