BLASTX nr result
ID: Rheum21_contig00028216
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00028216
(299 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMJ05248.1| hypothetical protein PRUPE_ppa026295mg [Prunus pe... 145 5e-33
ref|XP_002279464.2| PREDICTED: DNA repair protein recA homolog 3... 145 5e-33
ref|XP_002308284.1| recA family protein [Populus trichocarpa] gi... 144 9e-33
ref|XP_006475474.1| PREDICTED: DNA repair protein recA homolog 3... 142 4e-32
gb|EOY30426.1| RecA DNA recombination family protein [Theobroma ... 141 1e-31
ref|XP_004287571.1| PREDICTED: DNA repair protein recA homolog 3... 139 4e-31
ref|XP_006371978.1| hypothetical protein POPTR_0018s06880g [Popu... 138 7e-31
gb|EXB38860.1| DNA repair protein recA-3-like protein [Morus not... 136 3e-30
ref|XP_006345822.1| PREDICTED: DNA repair protein recA homolog 3... 132 4e-29
ref|XP_003549233.1| PREDICTED: DNA repair protein recA homolog 3... 132 5e-29
ref|XP_004240180.1| PREDICTED: DNA repair protein recA homolog 3... 131 8e-29
ref|XP_004507945.1| PREDICTED: DNA repair protein recA homolog 3... 131 1e-28
ref|XP_004507944.1| PREDICTED: DNA repair protein recA homolog 3... 131 1e-28
ref|XP_004507943.1| PREDICTED: DNA repair protein recA homolog 3... 131 1e-28
ref|XP_004168169.1| PREDICTED: DNA repair protein recA homolog 3... 130 2e-28
ref|XP_004141169.1| PREDICTED: DNA repair protein recA homolog 3... 130 2e-28
ref|XP_006299374.1| hypothetical protein CARUB_v10015533mg [Caps... 129 4e-28
ref|XP_006409044.1| hypothetical protein EUTSA_v10022701mg [Eutr... 127 1e-27
ref|XP_004488062.1| PREDICTED: DNA repair protein recA homolog 3... 127 2e-27
ref|NP_179539.2| recA DNA recombination family protein [Arabidop... 127 2e-27
>gb|EMJ05248.1| hypothetical protein PRUPE_ppa026295mg [Prunus persica]
Length = 415
Score = 145 bits (366), Expect = 5e-33
Identities = 71/97 (73%), Positives = 82/97 (84%)
Frame = -1
Query: 293 EVLGKGFLGTSYQSCNYATKGRKSSKSDGSESNDENMSKKDLALHLALEQINKSFGKGSI 114
+V +G L S Q CN+++KGRK SKSDGS+SN+ENMSKKDLAL AL+QI SFGKGSI
Sbjct: 19 QVHRRGILVPSTQLCNFSSKGRKKSKSDGSDSNEENMSKKDLALQQALDQITSSFGKGSI 78
Query: 113 MWLGRSPTPRHVPVISTGSFALDIALGIGGFPKGRVV 3
MWLGRS +PR VPV+STGSFALD+ALG GGFPKGRVV
Sbjct: 79 MWLGRSASPRQVPVVSTGSFALDLALGTGGFPKGRVV 115
>ref|XP_002279464.2| PREDICTED: DNA repair protein recA homolog 3, mitochondrial-like
[Vitis vinifera] gi|297738654|emb|CBI27899.3| unnamed
protein product [Vitis vinifera]
Length = 421
Score = 145 bits (366), Expect = 5e-33
Identities = 71/99 (71%), Positives = 83/99 (83%)
Frame = -1
Query: 299 AYEVLGKGFLGTSYQSCNYATKGRKSSKSDGSESNDENMSKKDLALHLALEQINKSFGKG 120
A E KG LGTS Q CN+++KGR+ SKSDGS+SN+EN+SKK+LAL AL+QI SFGKG
Sbjct: 17 AVEGFRKGVLGTSSQFCNFSSKGRRRSKSDGSDSNEENLSKKELALRQALDQITTSFGKG 76
Query: 119 SIMWLGRSPTPRHVPVISTGSFALDIALGIGGFPKGRVV 3
SIMWLGRS + +HVPV+STGSFALDI LGIGG PKGRVV
Sbjct: 77 SIMWLGRSVSSKHVPVVSTGSFALDIVLGIGGLPKGRVV 115
>ref|XP_002308284.1| recA family protein [Populus trichocarpa]
gi|222854260|gb|EEE91807.1| recA family protein [Populus
trichocarpa]
Length = 418
Score = 144 bits (364), Expect = 9e-33
Identities = 70/99 (70%), Positives = 82/99 (82%)
Frame = -1
Query: 299 AYEVLGKGFLGTSYQSCNYATKGRKSSKSDGSESNDENMSKKDLALHLALEQINKSFGKG 120
A E + +G LGTS Q CN+ATKG++ SKSDGSES +ENMSKK+LAL AL+QI FGKG
Sbjct: 17 APEGIRRGVLGTSTQICNFATKGKRKSKSDGSESGEENMSKKELALQQALDQITSQFGKG 76
Query: 119 SIMWLGRSPTPRHVPVISTGSFALDIALGIGGFPKGRVV 3
+IMW GRS P++VPV+STGSFALDIALG GGFPKGRVV
Sbjct: 77 AIMWFGRSEAPKNVPVVSTGSFALDIALGCGGFPKGRVV 115
>ref|XP_006475474.1| PREDICTED: DNA repair protein recA homolog 3, mitochondrial-like
[Citrus sinensis]
Length = 427
Score = 142 bits (359), Expect = 4e-32
Identities = 69/92 (75%), Positives = 78/92 (84%)
Frame = -1
Query: 278 GFLGTSYQSCNYATKGRKSSKSDGSESNDENMSKKDLALHLALEQINKSFGKGSIMWLGR 99
G L TS Q CN+++K ++ SKSDGS+S +ENMSKKDLAL AL+QI SFGKGSIMWLGR
Sbjct: 31 GMLETSTQICNFSSKSKRKSKSDGSDSGEENMSKKDLALQQALDQITSSFGKGSIMWLGR 90
Query: 98 SPTPRHVPVISTGSFALDIALGIGGFPKGRVV 3
S TPRHVPV+STGSFALDIALG GG PKGRVV
Sbjct: 91 SVTPRHVPVVSTGSFALDIALGTGGLPKGRVV 122
>gb|EOY30426.1| RecA DNA recombination family protein [Theobroma cacao]
Length = 420
Score = 141 bits (355), Expect = 1e-31
Identities = 70/99 (70%), Positives = 83/99 (83%)
Frame = -1
Query: 299 AYEVLGKGFLGTSYQSCNYATKGRKSSKSDGSESNDENMSKKDLALHLALEQINKSFGKG 120
A EV +G LG+S Q C++++KGR+ SKSDGS+S DENMSKK+LAL AL+QI SFGKG
Sbjct: 17 APEVCRRGVLGSSSQLCSFSSKGRRKSKSDGSDSCDENMSKKELALKQALDQITSSFGKG 76
Query: 119 SIMWLGRSPTPRHVPVISTGSFALDIALGIGGFPKGRVV 3
SIMWLGRS +P+ VPV+STGSFALDIALG GG PKGRVV
Sbjct: 77 SIMWLGRSVSPKDVPVVSTGSFALDIALGTGGLPKGRVV 115
>ref|XP_004287571.1| PREDICTED: DNA repair protein recA homolog 3, mitochondrial-like
[Fragaria vesca subsp. vesca]
Length = 420
Score = 139 bits (350), Expect = 4e-31
Identities = 67/93 (72%), Positives = 79/93 (84%)
Frame = -1
Query: 281 KGFLGTSYQSCNYATKGRKSSKSDGSESNDENMSKKDLALHLALEQINKSFGKGSIMWLG 102
+G L +S Q CN++TKG+K SKSDGS+S ENMSKKDLAL AL+QI +SFGKGSIMWLG
Sbjct: 23 RGLLSSSSQFCNFSTKGKKKSKSDGSDSGGENMSKKDLALQQALDQITESFGKGSIMWLG 82
Query: 101 RSPTPRHVPVISTGSFALDIALGIGGFPKGRVV 3
RS PR+V V+STGSF+LD+ALG GGFPKGRVV
Sbjct: 83 RSSGPRNVEVVSTGSFSLDLALGTGGFPKGRVV 115
>ref|XP_006371978.1| hypothetical protein POPTR_0018s06880g [Populus trichocarpa]
gi|550318224|gb|ERP49775.1| hypothetical protein
POPTR_0018s06880g [Populus trichocarpa]
Length = 417
Score = 138 bits (348), Expect = 7e-31
Identities = 69/97 (71%), Positives = 79/97 (81%)
Frame = -1
Query: 293 EVLGKGFLGTSYQSCNYATKGRKSSKSDGSESNDENMSKKDLALHLALEQINKSFGKGSI 114
E L + LGTS Q+ N+ATKG++ SKSDGSES +EN SKKDLAL AL+QI FGKGSI
Sbjct: 15 EGLRRVVLGTSSQTRNFATKGKRKSKSDGSESGEENTSKKDLALQQALDQITSQFGKGSI 74
Query: 113 MWLGRSPTPRHVPVISTGSFALDIALGIGGFPKGRVV 3
MW GRS P++VPV+STGSFALDIALG GGFPKGRVV
Sbjct: 75 MWFGRSEAPKNVPVVSTGSFALDIALGCGGFPKGRVV 111
>gb|EXB38860.1| DNA repair protein recA-3-like protein [Morus notabilis]
Length = 1301
Score = 136 bits (343), Expect = 3e-30
Identities = 64/99 (64%), Positives = 83/99 (83%)
Frame = -1
Query: 299 AYEVLGKGFLGTSYQSCNYATKGRKSSKSDGSESNDENMSKKDLALHLALEQINKSFGKG 120
A EV G +G+S Q C +++KGR+ SKSDGS+S +EN+SKK++AL AL+QI SFGKG
Sbjct: 489 AAEVFRGGIVGSSSQLCCFSSKGRRKSKSDGSDSGEENLSKKEIALRQALDQITSSFGKG 548
Query: 119 SIMWLGRSPTPRHVPVISTGSFALDIALGIGGFPKGRVV 3
SIMWLGRS +P++VPV+STGSF+LD+ALG+GG PKGRVV
Sbjct: 549 SIMWLGRSESPKNVPVLSTGSFSLDLALGVGGLPKGRVV 587
>ref|XP_006345822.1| PREDICTED: DNA repair protein recA homolog 3, mitochondrial-like
[Solanum tuberosum]
Length = 418
Score = 132 bits (333), Expect = 4e-29
Identities = 63/95 (66%), Positives = 77/95 (81%)
Frame = -1
Query: 287 LGKGFLGTSYQSCNYATKGRKSSKSDGSESNDENMSKKDLALHLALEQINKSFGKGSIMW 108
L K G S Q C Y+++G+K S SDGS+S +EN+SKKDLAL AL+QI SFGKGSIMW
Sbjct: 22 LRKSLFGVSDQLCYYSSRGKKKSNSDGSDSGEENLSKKDLALKHALDQITTSFGKGSIMW 81
Query: 107 LGRSPTPRHVPVISTGSFALDIALGIGGFPKGRVV 3
LGR+ +P+ VPV+STGSF+LDIALGIGG PKGRV+
Sbjct: 82 LGRTASPKQVPVVSTGSFSLDIALGIGGLPKGRVI 116
>ref|XP_003549233.1| PREDICTED: DNA repair protein recA homolog 3, mitochondrial
[Glycine max]
Length = 459
Score = 132 bits (332), Expect = 5e-29
Identities = 65/97 (67%), Positives = 82/97 (84%)
Frame = -1
Query: 293 EVLGKGFLGTSYQSCNYATKGRKSSKSDGSESNDENMSKKDLALHLALEQINKSFGKGSI 114
+V G +GTS Q ++++KGR+ SKSDGS+S +ENMSKK+LAL AL+QI +FGKGSI
Sbjct: 45 KVFKLGMIGTS-QILSFSSKGRRRSKSDGSDSGEENMSKKELALQQALDQITSAFGKGSI 103
Query: 113 MWLGRSPTPRHVPVISTGSFALDIALGIGGFPKGRVV 3
MWLGRS +P++VPV+STGSFALD+ALGIGG PKGRVV
Sbjct: 104 MWLGRSVSPKNVPVVSTGSFALDVALGIGGLPKGRVV 140
>ref|XP_004240180.1| PREDICTED: DNA repair protein recA homolog 3, mitochondrial-like
[Solanum lycopersicum]
Length = 418
Score = 131 bits (330), Expect = 8e-29
Identities = 62/95 (65%), Positives = 77/95 (81%)
Frame = -1
Query: 287 LGKGFLGTSYQSCNYATKGRKSSKSDGSESNDENMSKKDLALHLALEQINKSFGKGSIMW 108
L K G S Q C ++++G+K S SDGS+S +EN+SKKDLAL AL+QI SFGKGSIMW
Sbjct: 22 LSKSLFGVSDQLCYFSSRGKKKSNSDGSDSGEENLSKKDLALKHALDQITTSFGKGSIMW 81
Query: 107 LGRSPTPRHVPVISTGSFALDIALGIGGFPKGRVV 3
LGR+ +P+ VPV+STGSF+LDIALGIGG PKGRV+
Sbjct: 82 LGRTVSPKQVPVVSTGSFSLDIALGIGGLPKGRVI 116
>ref|XP_004507945.1| PREDICTED: DNA repair protein recA homolog 3, mitochondrial-like
isoform X3 [Cicer arietinum]
Length = 421
Score = 131 bits (329), Expect = 1e-28
Identities = 63/90 (70%), Positives = 77/90 (85%)
Frame = -1
Query: 272 LGTSYQSCNYATKGRKSSKSDGSESNDENMSKKDLALHLALEQINKSFGKGSIMWLGRSP 93
L +++Q ++++KGR+ SKSDGS+S +ENMSKKDLAL AL+QI +FGKGSIMWLGRS
Sbjct: 25 LSSTFQVLSFSSKGRRRSKSDGSDSGEENMSKKDLALKQALDQITSTFGKGSIMWLGRSD 84
Query: 92 TPRHVPVISTGSFALDIALGIGGFPKGRVV 3
P+ VPV+STGSFALDIALGIGG PKGRVV
Sbjct: 85 WPKDVPVVSTGSFALDIALGIGGLPKGRVV 114
>ref|XP_004507944.1| PREDICTED: DNA repair protein recA homolog 3, mitochondrial-like
isoform X2 [Cicer arietinum]
Length = 426
Score = 131 bits (329), Expect = 1e-28
Identities = 63/90 (70%), Positives = 77/90 (85%)
Frame = -1
Query: 272 LGTSYQSCNYATKGRKSSKSDGSESNDENMSKKDLALHLALEQINKSFGKGSIMWLGRSP 93
L +++Q ++++KGR+ SKSDGS+S +ENMSKKDLAL AL+QI +FGKGSIMWLGRS
Sbjct: 35 LSSTFQVLSFSSKGRRRSKSDGSDSGEENMSKKDLALKQALDQITSTFGKGSIMWLGRSD 94
Query: 92 TPRHVPVISTGSFALDIALGIGGFPKGRVV 3
P+ VPV+STGSFALDIALGIGG PKGRVV
Sbjct: 95 WPKDVPVVSTGSFALDIALGIGGLPKGRVV 124
>ref|XP_004507943.1| PREDICTED: DNA repair protein recA homolog 3, mitochondrial-like
isoform X1 [Cicer arietinum]
Length = 431
Score = 131 bits (329), Expect = 1e-28
Identities = 63/90 (70%), Positives = 77/90 (85%)
Frame = -1
Query: 272 LGTSYQSCNYATKGRKSSKSDGSESNDENMSKKDLALHLALEQINKSFGKGSIMWLGRSP 93
L +++Q ++++KGR+ SKSDGS+S +ENMSKKDLAL AL+QI +FGKGSIMWLGRS
Sbjct: 35 LSSTFQVLSFSSKGRRRSKSDGSDSGEENMSKKDLALKQALDQITSTFGKGSIMWLGRSD 94
Query: 92 TPRHVPVISTGSFALDIALGIGGFPKGRVV 3
P+ VPV+STGSFALDIALGIGG PKGRVV
Sbjct: 95 WPKDVPVVSTGSFALDIALGIGGLPKGRVV 124
>ref|XP_004168169.1| PREDICTED: DNA repair protein recA homolog 3, mitochondrial-like
[Cucumis sativus]
Length = 588
Score = 130 bits (327), Expect = 2e-28
Identities = 59/93 (63%), Positives = 80/93 (86%)
Frame = -1
Query: 281 KGFLGTSYQSCNYATKGRKSSKSDGSESNDENMSKKDLALHLALEQINKSFGKGSIMWLG 102
+G LGTS Q CN++TKG+ ++ SDGS+S+++ +SKK+LAL AL QI +FGKGSIMWLG
Sbjct: 96 RGILGTSTQICNFSTKGKPANSSDGSDSSEKKLSKKELALQQALGQITTTFGKGSIMWLG 155
Query: 101 RSPTPRHVPVISTGSFALDIALGIGGFPKGRVV 3
RS + ++VPV+STGSF+LD+ALG+GGFPKGRV+
Sbjct: 156 RSASSKNVPVVSTGSFSLDMALGVGGFPKGRVI 188
>ref|XP_004141169.1| PREDICTED: DNA repair protein recA homolog 3, mitochondrial-like
[Cucumis sativus]
Length = 541
Score = 130 bits (327), Expect = 2e-28
Identities = 59/93 (63%), Positives = 80/93 (86%)
Frame = -1
Query: 281 KGFLGTSYQSCNYATKGRKSSKSDGSESNDENMSKKDLALHLALEQINKSFGKGSIMWLG 102
+G LGTS Q CN++TKG+ ++ SDGS+S+++ +SKK+LAL AL QI +FGKGSIMWLG
Sbjct: 49 RGILGTSTQICNFSTKGKPANSSDGSDSSEKKLSKKELALQQALGQITTTFGKGSIMWLG 108
Query: 101 RSPTPRHVPVISTGSFALDIALGIGGFPKGRVV 3
RS + ++VPV+STGSF+LD+ALG+GGFPKGRV+
Sbjct: 109 RSASSKNVPVVSTGSFSLDMALGVGGFPKGRVI 141
>ref|XP_006299374.1| hypothetical protein CARUB_v10015533mg [Capsella rubella]
gi|482568083|gb|EOA32272.1| hypothetical protein
CARUB_v10015533mg [Capsella rubella]
Length = 430
Score = 129 bits (324), Expect = 4e-28
Identities = 62/97 (63%), Positives = 77/97 (79%)
Frame = -1
Query: 293 EVLGKGFLGTSYQSCNYATKGRKSSKSDGSESNDENMSKKDLALHLALEQINKSFGKGSI 114
EV +GTS+Q +A K +K SKSDG+ S++E MSKK++AL AL+QI SFGKGSI
Sbjct: 19 EVFNSSVVGTSFQLRGFAAKAKKKSKSDGNGSSEEGMSKKEIALQEALDQITSSFGKGSI 78
Query: 113 MWLGRSPTPRHVPVISTGSFALDIALGIGGFPKGRVV 3
MWLGR+ +PR+VPV STGSFALD+ALG+GG PKGRVV
Sbjct: 79 MWLGRAVSPRNVPVFSTGSFALDLALGVGGLPKGRVV 115
>ref|XP_006409044.1| hypothetical protein EUTSA_v10022701mg [Eutrema salsugineum]
gi|557110206|gb|ESQ50497.1| hypothetical protein
EUTSA_v10022701mg [Eutrema salsugineum]
Length = 424
Score = 127 bits (320), Expect = 1e-27
Identities = 60/97 (61%), Positives = 78/97 (80%)
Frame = -1
Query: 293 EVLGKGFLGTSYQSCNYATKGRKSSKSDGSESNDENMSKKDLALHLALEQINKSFGKGSI 114
EV +G +GTS+Q ++ K +K SKSDG+ S++E MSKK++AL A++QI SFGKGSI
Sbjct: 19 EVFSRGVVGTSFQLRGFSAKAKKKSKSDGNGSSEEGMSKKEVALQQAIDQITTSFGKGSI 78
Query: 113 MWLGRSPTPRHVPVISTGSFALDIALGIGGFPKGRVV 3
MWLGR+ +P+ VPV STGSFALD+ALG+GG PKGRVV
Sbjct: 79 MWLGRAVSPKDVPVYSTGSFALDLALGVGGLPKGRVV 115
>ref|XP_004488062.1| PREDICTED: DNA repair protein recA homolog 3, mitochondrial-like
[Cicer arietinum]
Length = 429
Score = 127 bits (318), Expect = 2e-27
Identities = 64/95 (67%), Positives = 75/95 (78%)
Frame = -1
Query: 287 LGKGFLGTSYQSCNYATKGRKSSKSDGSESNDENMSKKDLALHLALEQINKSFGKGSIMW 108
L G LGTS KG++ SKSDGS+S +ENMSKKDLAL A++QI +FGKGSIMW
Sbjct: 28 LKNGVLGTSQVFSFSTNKGKRRSKSDGSDSGEENMSKKDLALQQAMDQITSTFGKGSIMW 87
Query: 107 LGRSPTPRHVPVISTGSFALDIALGIGGFPKGRVV 3
LGRS +P++VPV+STGSFALDIALGI G PKGRVV
Sbjct: 88 LGRSVSPKNVPVVSTGSFALDIALGIFGLPKGRVV 122
>ref|NP_179539.2| recA DNA recombination family protein [Arabidopsis thaliana]
gi|209572665|sp|Q9ZUP2.2|RECA3_ARATH RecName: Full=DNA
repair protein recA homolog 3, mitochondrial; AltName:
Full=Recombinase A homolog 3; Flags: Precursor
gi|119935859|gb|ABM06015.1| At2g19490 [Arabidopsis
thaliana] gi|330251794|gb|AEC06888.1| recA DNA
recombination family protein [Arabidopsis thaliana]
Length = 430
Score = 127 bits (318), Expect = 2e-27
Identities = 61/97 (62%), Positives = 79/97 (81%)
Frame = -1
Query: 293 EVLGKGFLGTSYQSCNYATKGRKSSKSDGSESNDENMSKKDLALHLALEQINKSFGKGSI 114
E+L + +GTS+Q +A K +K SKSDG+ S++E MSKK++AL AL+QI SFGKGSI
Sbjct: 19 ELLRRSVVGTSFQLRGFAAKAKKKSKSDGNGSSEEGMSKKEIALQQALDQITSSFGKGSI 78
Query: 113 MWLGRSPTPRHVPVISTGSFALDIALGIGGFPKGRVV 3
M+LGR+ +PR+VPV STGSFALD+ALG+GG PKGRVV
Sbjct: 79 MYLGRAVSPRNVPVFSTGSFALDVALGVGGLPKGRVV 115