BLASTX nr result
ID: Rheum21_contig00028130
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00028130
(936 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAR86717.1| zinc finger protein [Populus euphratica] 189 1e-73
ref|XP_003588283.1| Cytochrome c biogenesis [Medicago truncatula... 137 8e-30
ref|XP_003588309.1| hypothetical protein MTR_1g005780 [Medicago ... 128 4e-27
ref|XP_002520031.1| conserved hypothetical protein [Ricinus comm... 113 1e-22
emb|CAN83576.1| hypothetical protein VITISV_021757 [Vitis vinifera] 110 6e-22
ref|XP_002523006.1| conserved hypothetical protein [Ricinus comm... 97 9e-18
ref|XP_002531680.1| conserved hypothetical protein [Ricinus comm... 74 6e-11
gb|AGC78966.1| hypothetical protein (mitochondrion) [Vicia faba]... 73 1e-10
ref|XP_006396157.1| hypothetical protein EUTSA_v10002931mg [Eutr... 72 2e-10
ref|YP_008999567.1| cytochrome c biogenesis FC (mitochondrion) [... 70 9e-10
dbj|BAD94978.1| cytochrome c biogenesis orf452 [Arabidopsis thal... 70 9e-10
ref|XP_002489008.1| hypothetical protein SORBIDRAFT_0506s002170 ... 60 2e-09
emb|CBX33249.1| hypothetical protein [Beta vulgaris subsp. marit... 69 3e-09
ref|YP_004222388.1| hypothetical protein BevumaM_p155 [Beta vulg... 69 3e-09
gb|AGC78967.1| hypothetical protein (mitochondrion) [Vicia faba]... 68 6e-09
>gb|AAR86717.1| zinc finger protein [Populus euphratica]
Length = 218
Score = 189 bits (481), Expect(2) = 1e-73
Identities = 89/95 (93%), Positives = 91/95 (95%)
Frame = +1
Query: 175 TNANGCKPRCSKTPSADHTERHESAGNASWRSGVKHP*RYEKRGRDDIIYVRTAPRGVDP 354
TNANGCK RCS+TPSADHTERHESAGNASWRSGVKHP RYEKRGRDDIIYVRTAPRGVDP
Sbjct: 2 TNANGCKLRCSETPSADHTERHESAGNASWRSGVKHPMRYEKRGRDDIIYVRTAPRGVDP 61
Query: 355 ASN*VFDQGTGEFPLPLAGQPGRERGGNGLPKKPA 459
AS VFDQGTG+FPLPLAGQPGRERGGNGLPKKPA
Sbjct: 62 ASTQVFDQGTGKFPLPLAGQPGRERGGNGLPKKPA 96
Score = 115 bits (287), Expect(2) = 1e-73
Identities = 72/131 (54%), Positives = 83/131 (63%), Gaps = 3/131 (2%)
Frame = +2
Query: 434 GTGFPKSQPGPGSA*NEGDG---PNVVLAKPTSFLGFGRRKADVGTRVGAQRN*ESHSI* 604
G G PK +P PG + G NVV A PTS++ G R ADVGTRVGAQ N ESHSI
Sbjct: 88 GNGLPK-KPAPGRGQHRMKGMALTNVVSALPTSWVTGGER-ADVGTRVGAQPNEESHSIL 145
Query: 605 GETEWAGTSGLVSEPIDQTTTTSLIRSVLAAYPGIEWDGIERTRSASAIGSVFLGGERLV 784
GETEWAGTSGLVS+ QTTTTS IR VL AYPG++W+ R IG F GG++L
Sbjct: 146 GETEWAGTSGLVSD--GQTTTTSFIRLVLPAYPGMKWN--RRNAKRYRIGFFFWGGDKLA 201
Query: 785 KKQAYPLPTGS 817
QA P P +
Sbjct: 202 SSQAPPRPAAA 212
>ref|XP_003588283.1| Cytochrome c biogenesis [Medicago truncatula]
gi|355477331|gb|AES58534.1| Cytochrome c biogenesis
[Medicago truncatula]
Length = 860
Score = 137 bits (344), Expect = 8e-30
Identities = 93/186 (50%), Positives = 101/186 (54%)
Frame = +2
Query: 2 AYVRPVAHASYLFRAGGVNSDSIRVFNPAAEMLS*LLNLDRKMAYSRIRA*G*GTLDELM 181
AYVRPVAHASYLF AGGVNSDSIRVFNPAAE+L
Sbjct: 265 AYVRPVAHASYLFGAGGVNSDSIRVFNPAAEIL--------------------------- 297
Query: 182 RMGVSLAARKHPVLTTLRDTKAQVTPVGEVALSIPSGTKREVVMISSTSVPLLVE*IPHP 361
AARKHPVLTTLR+TKAQV PVGEVALSIPSGTKREVVMISSTSVPLL
Sbjct: 298 ------AARKHPVLTTLRETKAQVMPVGEVALSIPSGTKREVVMISSTSVPLLP------ 345
Query: 362 TKSLTRERGNSHYRWQASRAVSAVGTGFPKSQPGPGSA*NEGDGPNVVLAKPTSFLGFGR 541
RERG G G PK +P PG + G ++L + LG
Sbjct: 346 ----GRERG---------------GNGLPK-KPAPGQGRHRMKGMALMLCWQSQLLGLRA 385
Query: 542 RKADVG 559
K+ G
Sbjct: 386 EKSGRG 391
Score = 80.1 bits (196), Expect = 1e-12
Identities = 39/43 (90%), Positives = 39/43 (90%)
Frame = +1
Query: 808 DRQLLGLLISSKLPPVFGPSCMRQKLVSRTVRRPSPTPAVMVR 936
DRQLLGL IS KLPPVFGPSCMRQKL RTVRRPSPTPAVMVR
Sbjct: 416 DRQLLGLPISPKLPPVFGPSCMRQKLAPRTVRRPSPTPAVMVR 458
>ref|XP_003588309.1| hypothetical protein MTR_1g005780 [Medicago truncatula]
gi|355477357|gb|AES58560.1| hypothetical protein
MTR_1g005780 [Medicago truncatula]
Length = 91
Score = 128 bits (321), Expect = 4e-27
Identities = 66/92 (71%), Positives = 68/92 (73%)
Frame = -3
Query: 595 MALLVTLRSDPSPHVRFSPPETQERSWLCQHNIRAVPFILC*PRPGLAFWEARSHRAHGP 416
MALLVTLR SPHVR SPP TQE + + P P PGLAFWEARSHRAHGP
Sbjct: 1 MALLVTLRPGLSPHVRSSPPATQEVGF-ANTTLGPSPSFYADPGPGLAFWEARSHRAHGP 59
Query: 415 AGLPAVVGIPPFPGQRLSWMRDLLHEERYGRR 320
AGLPAVVGI PFPGQRL WMRDLL EERYGRR
Sbjct: 60 AGLPAVVGIIPFPGQRLGWMRDLLREERYGRR 91
>ref|XP_002520031.1| conserved hypothetical protein [Ricinus communis]
gi|223540795|gb|EEF42355.1| conserved hypothetical
protein [Ricinus communis]
Length = 231
Score = 113 bits (282), Expect = 1e-22
Identities = 57/86 (66%), Positives = 62/86 (72%)
Frame = +1
Query: 223 DHTERHESAGNASWRSGVKHP*RYEKRGRDDIIYVRTAPRGVDPASN*VFDQGTGEFPLP 402
+HTERHESAGN SWRSGVKH RYEKRGRDDIIY+ PRGV+P+S VFDQ TGEFPL
Sbjct: 70 NHTERHESAGNTSWRSGVKHLKRYEKRGRDDIIYICITPRGVNPSSKQVFDQRTGEFPLL 129
Query: 403 LAGQPGRERGGNGLPKKPARAGVSIE 480
LAGQ G PK A AG+ E
Sbjct: 130 LAGQLAVSVVGTDFPKSQAPAGLKFE 155
Score = 62.8 bits (151), Expect = 2e-07
Identities = 29/63 (46%), Positives = 34/63 (53%)
Frame = -3
Query: 445 EARSHRAHGPAGLPAVVGIPPFPGQRLSWMRDLLHEERYGRR*YHHDLSFRTARDA*RHF 266
E SH AHGP LP V+G PFP QRL WMR+LLHEER H + R +H
Sbjct: 31 EVHSHHAHGPTSLPTVMGTFPFPSQRLGWMRNLLHEERVNHTERHESAGNTSWRSGVKHL 90
Query: 265 ANW 257
+
Sbjct: 91 KRY 93
>emb|CAN83576.1| hypothetical protein VITISV_021757 [Vitis vinifera]
Length = 194
Score = 110 bits (276), Expect = 6e-22
Identities = 53/57 (92%), Positives = 54/57 (94%)
Frame = +1
Query: 298 KRGRDDIIYVRTAPRGVDPASN*VFDQGTGEFPLPLAGQPGRERGGNGLPKKPARAG 468
+RGRD II VRTAPRGVDPASN VFDQGTGEFPLPLAGQPGRERGGNGLPKKPARAG
Sbjct: 30 ERGRDHIINVRTAPRGVDPASNQVFDQGTGEFPLPLAGQPGRERGGNGLPKKPARAG 86
Score = 100 bits (250), Expect = 6e-19
Identities = 93/241 (38%), Positives = 109/241 (45%), Gaps = 3/241 (1%)
Frame = +2
Query: 179 MRMGVSLAARKHPVLTTLRDTKAQVTPVGEVALSIPSGTKREVVMISSTSVPLLVE*IPH 358
MRMGVSL ARKHPVLTTLRDTKAQVTPVGE H
Sbjct: 1 MRMGVSLDARKHPVLTTLRDTKAQVTPVGERGRD-------------------------H 35
Query: 359 PTKSLTRERGNSHYRWQASRAVSAVGTG-FPKSQPGPGSA*NEGDG--PNVVLAKPTSFL 529
T RG AS V GTG FP G G+G A PTS++
Sbjct: 36 IINVRTAPRGVD----PASNQVFDQGTGEFPLPLAGQPGRERGGNGLPKKPARAGPTSWV 91
Query: 530 GFGRRKADVGTRVGAQRN*ESHSI*GETEWAGTSGLVSEPIDQTTTTSLIRSVLAAYPGI 709
G + +G+ R+ +I G + V P + L+R L +
Sbjct: 92 AGGEEQT---WGLGSGRSVTKRAIPFRARQNGRARAVWCP------SRLVRRRLPTH--- 139
Query: 710 EWDGIERTRSASAIGSVFLGGERLVKKQAYPLPTGSCWVSSSLLNFPPSSARAV*GRNSS 889
IERTRSASAIGSVFLGG R + + P PTGSC VS SLLNFP + + RN
Sbjct: 140 ----IERTRSASAIGSVFLGGIRWLLHKLIPAPTGSCEVSPSLLNFP---RKKILSRNDE 192
Query: 890 H 892
H
Sbjct: 193 H 193
>ref|XP_002523006.1| conserved hypothetical protein [Ricinus communis]
gi|223537818|gb|EEF39436.1| conserved hypothetical
protein [Ricinus communis]
Length = 58
Score = 97.1 bits (240), Expect = 9e-18
Identities = 50/53 (94%), Positives = 51/53 (96%)
Frame = +2
Query: 188 GVSLAARKHPVLTTLRDTKAQVTPVGEVALSIPSGTKREVVMISSTSVPLLVE 346
GVS +ARKHPVLTTLRDTKAQVTPVGEVALSIPSGTKREVVMISST VPLLVE
Sbjct: 6 GVSFSARKHPVLTTLRDTKAQVTPVGEVALSIPSGTKREVVMISSTFVPLLVE 58
>ref|XP_002531680.1| conserved hypothetical protein [Ricinus communis]
gi|223528685|gb|EEF30699.1| conserved hypothetical
protein [Ricinus communis]
Length = 72
Score = 74.3 bits (181), Expect = 6e-11
Identities = 42/73 (57%), Positives = 50/73 (68%)
Frame = +2
Query: 500 VVLAKPTSFLGFGRRKADVGTRVGAQRN*ESHSI*GETEWAGTSGLVSEPIDQTTTTSLI 679
+VLA PTS++ G R A+ GT+ GETEWAGTSGLVS+PI Q TTTS I
Sbjct: 2 LVLALPTSWVVGGER-AEAGTQ-------------GETEWAGTSGLVSKPIGQMTTTSFI 47
Query: 680 RSVLAAYPGIEWD 718
R VLAAYPG++WD
Sbjct: 48 RLVLAAYPGMKWD 60
>gb|AGC78966.1| hypothetical protein (mitochondrion) [Vicia faba]
gi|442803258|gb|AGC78993.1| hypothetical protein
(mitochondrion) [Vicia faba]
Length = 227
Score = 73.2 bits (178), Expect = 1e-10
Identities = 35/40 (87%), Positives = 36/40 (90%)
Frame = +1
Query: 817 LLGLLISSKLPPVFGPSCMRQKLVSRTVRRPSPTPAVMVR 936
+LGL IS KLPPVFGPSCMRQKL RTVRRPSPTPAVMVR
Sbjct: 1 MLGLPISPKLPPVFGPSCMRQKLAPRTVRRPSPTPAVMVR 40
>ref|XP_006396157.1| hypothetical protein EUTSA_v10002931mg [Eutrema salsugineum]
gi|557096428|gb|ESQ36936.1| hypothetical protein
EUTSA_v10002931mg [Eutrema salsugineum]
Length = 357
Score = 72.4 bits (176), Expect = 2e-10
Identities = 36/40 (90%), Positives = 36/40 (90%)
Frame = +1
Query: 817 LLGLLISSKLPPVFGPSCMRQKLVSRTVRRPSPTPAVMVR 936
LLGLLIS KLPPVF PSCMRQKLV RTV RPSPTPAVMVR
Sbjct: 171 LLGLLISPKLPPVFDPSCMRQKLVPRTVWRPSPTPAVMVR 210
>ref|YP_008999567.1| cytochrome c biogenesis FC (mitochondrion) [Helianthus annuus]
gi|571031405|gb|AHF21050.1| cytochrome c biogenesis FC
(mitochondrion) [Helianthus annuus]
Length = 294
Score = 70.5 bits (171), Expect = 9e-10
Identities = 34/34 (100%), Positives = 34/34 (100%)
Frame = +2
Query: 2 AYVRPVAHASYLFRAGGVNSDSIRVFNPAAEMLS 103
AYVRPVAHASYLFRAGGVNSDSIRVFNPAAEMLS
Sbjct: 261 AYVRPVAHASYLFRAGGVNSDSIRVFNPAAEMLS 294
>dbj|BAD94978.1| cytochrome c biogenesis orf452 [Arabidopsis thaliana]
Length = 298
Score = 70.5 bits (171), Expect = 9e-10
Identities = 34/34 (100%), Positives = 34/34 (100%)
Frame = +2
Query: 2 AYVRPVAHASYLFRAGGVNSDSIRVFNPAAEMLS 103
AYVRPVAHASYLFRAGGVNSDSIRVFNPAAEMLS
Sbjct: 265 AYVRPVAHASYLFRAGGVNSDSIRVFNPAAEMLS 298
>ref|XP_002489008.1| hypothetical protein SORBIDRAFT_0506s002170 [Sorghum bicolor]
gi|241947355|gb|EES20500.1| hypothetical protein
SORBIDRAFT_0506s002170 [Sorghum bicolor]
Length = 67
Score = 59.7 bits (143), Expect(2) = 2e-09
Identities = 27/33 (81%), Positives = 29/33 (87%)
Frame = +1
Query: 838 SKLPPVFGPSCMRQKLVSRTVRRPSPTPAVMVR 936
S PVFGPSCMRQKLV RTVRRPSPTPA+MV+
Sbjct: 31 SSTSPVFGPSCMRQKLVPRTVRRPSPTPAIMVQ 63
Score = 30.0 bits (66), Expect(2) = 2e-09
Identities = 14/21 (66%), Positives = 14/21 (66%)
Frame = +3
Query: 801 PYRPAAAGSPHLF*TSPRLRP 863
P RPAA GSPHL TSP P
Sbjct: 19 PSRPAAVGSPHLSSTSPVFGP 39
>emb|CBX33249.1| hypothetical protein [Beta vulgaris subsp. maritima]
Length = 294
Score = 68.9 bits (167), Expect = 3e-09
Identities = 33/34 (97%), Positives = 34/34 (100%)
Frame = +2
Query: 2 AYVRPVAHASYLFRAGGVNSDSIRVFNPAAEMLS 103
AYVRPVAHASYLFRAGGVNSDSIRVFNPAAE+LS
Sbjct: 261 AYVRPVAHASYLFRAGGVNSDSIRVFNPAAEVLS 294
>ref|YP_004222388.1| hypothetical protein BevumaM_p155 [Beta vulgaris subsp. maritima]
gi|346683261|ref|YP_004842194.1| hypothetical protein
BemaM_p150 [Beta macrocarpa]
gi|317905620|emb|CBX33222.1| hypothetical protein [Beta
vulgaris subsp. maritima] gi|319439903|emb|CBX33317.1|
hypothetical protein [Beta vulgaris subsp. maritima]
gi|345500179|emb|CBX24998.1| hypothetical protein [Beta
macrocarpa] gi|384939164|emb|CBL52011.1| hypothetical
protein (mitochondrion) [Beta vulgaris subsp. maritima]
Length = 294
Score = 68.9 bits (167), Expect = 3e-09
Identities = 33/34 (97%), Positives = 34/34 (100%)
Frame = +2
Query: 2 AYVRPVAHASYLFRAGGVNSDSIRVFNPAAEMLS 103
AYVRPVAHASYLFRAGGVNSDSIRVFNPAAE+LS
Sbjct: 261 AYVRPVAHASYLFRAGGVNSDSIRVFNPAAEVLS 294
>gb|AGC78967.1| hypothetical protein (mitochondrion) [Vicia faba]
gi|442803259|gb|AGC78994.1| hypothetical protein
(mitochondrion) [Vicia faba]
Length = 298
Score = 67.8 bits (164), Expect = 6e-09
Identities = 33/34 (97%), Positives = 33/34 (97%)
Frame = +2
Query: 2 AYVRPVAHASYLFRAGGVNSDSIRVFNPAAEMLS 103
AYVRPVAHASYLF AGGVNSDSIRVFNPAAEMLS
Sbjct: 265 AYVRPVAHASYLFGAGGVNSDSIRVFNPAAEMLS 298