BLASTX nr result
ID: Rheum21_contig00028115
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00028115
(304 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EPS69820.1| hypothetical protein M569_04940 [Genlisea aurea] 102 5e-20
ref|XP_004158102.1| PREDICTED: LOW QUALITY PROTEIN: DNA damage-b... 102 5e-20
ref|XP_004135539.1| PREDICTED: DNA damage-binding protein 1-like... 102 5e-20
gb|EXC25620.1| DNA damage-binding protein 1a [Morus notabilis] 101 1e-19
ref|XP_004304711.1| PREDICTED: DNA damage-binding protein 1-like... 100 2e-19
gb|EOX96952.1| Damaged DNA binding protein 1A isoform 3 [Theobro... 100 2e-19
gb|EOX96951.1| Damaged DNA binding protein 1A isoform 2 [Theobro... 100 2e-19
gb|EOX96950.1| Damaged DNA binding protein 1A isoform 1 [Theobro... 100 2e-19
emb|CBI30975.3| unnamed protein product [Vitis vinifera] 100 3e-19
ref|XP_002280744.1| PREDICTED: DNA damage-binding protein 1 isof... 100 3e-19
ref|XP_002280735.1| PREDICTED: DNA damage-binding protein 1 isof... 100 3e-19
ref|XP_006468270.1| PREDICTED: DNA damage-binding protein 1a-lik... 99 4e-19
ref|XP_006448953.1| hypothetical protein CICLE_v10014106mg [Citr... 99 4e-19
gb|EMJ14913.1| hypothetical protein PRUPE_ppa000579mg [Prunus pe... 99 4e-19
ref|XP_006359100.1| PREDICTED: DNA damage-binding protein 1-like... 99 8e-19
ref|XP_006359099.1| PREDICTED: DNA damage-binding protein 1-like... 99 8e-19
sp|Q6E7D1.1|DDB1_SOLCE RecName: Full=DNA damage-binding protein ... 99 8e-19
ref|NP_001234275.1| DNA damage-binding protein 1 [Solanum lycope... 99 8e-19
ref|XP_003531313.1| PREDICTED: DNA damage-binding protein 1-like... 99 8e-19
ref|XP_003630019.1| DNA damage-binding protein [Medicago truncat... 98 1e-18
>gb|EPS69820.1| hypothetical protein M569_04940 [Genlisea aurea]
Length = 1091
Score = 102 bits (254), Expect = 5e-20
Identities = 57/101 (56%), Positives = 67/101 (66%)
Frame = -2
Query: 303 FLYGCSRPTVVVLYHKGDSYIRYVKIYEVSLETNVFVDCPWSLEKLIDDTAHSLISVPPP 124
FLYGC RPTVVVLY R+VK YEV L+ FV+ PWS L D+ A LI VPPP
Sbjct: 170 FLYGCPRPTVVVLYQDNKD-ARHVKTYEVVLKDKDFVEGPWSQNNL-DNGAELLIPVPPP 227
Query: 123 LCGFIIVGQHKIAYSCATTFKSIGIKLAIPWACERVDADGS 1
LCG II+G+ I Y A+TFK+I I+ +I A RVDADGS
Sbjct: 228 LCGVIIIGEETIVYCSASTFKAIPIRPSITRAYGRVDADGS 268
>ref|XP_004158102.1| PREDICTED: LOW QUALITY PROTEIN: DNA damage-binding protein 1-like
[Cucumis sativus]
Length = 570
Score = 102 bits (254), Expect = 5e-20
Identities = 56/101 (55%), Positives = 67/101 (66%)
Frame = -2
Query: 303 FLYGCSRPTVVVLYHKGDSYIRYVKIYEVSLETNVFVDCPWSLEKLIDDTAHSLISVPPP 124
FLYGCSRPT+VVLY R+VK YEV L+ FV+ PWS L D+ A LI VPPP
Sbjct: 168 FLYGCSRPTIVVLYQDNKD-ARHVKTYEVVLKDKDFVEGPWSQNNL-DNGAAVLIPVPPP 225
Query: 123 LCGFIIVGQHKIAYSCATTFKSIGIKLAIPWACERVDADGS 1
LCG II+G+ I Y AT FK+I ++ +I A RVDADGS
Sbjct: 226 LCGVIIIGEETIVYCSATAFKAIPVRPSITRAYGRVDADGS 266
>ref|XP_004135539.1| PREDICTED: DNA damage-binding protein 1-like [Cucumis sativus]
Length = 1093
Score = 102 bits (254), Expect = 5e-20
Identities = 56/101 (55%), Positives = 67/101 (66%)
Frame = -2
Query: 303 FLYGCSRPTVVVLYHKGDSYIRYVKIYEVSLETNVFVDCPWSLEKLIDDTAHSLISVPPP 124
FLYGCSRPT+VVLY R+VK YEV L+ FV+ PWS L D+ A LI VPPP
Sbjct: 168 FLYGCSRPTIVVLYQDNKD-ARHVKTYEVVLKDKDFVEGPWSQNNL-DNGAAVLIPVPPP 225
Query: 123 LCGFIIVGQHKIAYSCATTFKSIGIKLAIPWACERVDADGS 1
LCG II+G+ I Y AT FK+I ++ +I A RVDADGS
Sbjct: 226 LCGVIIIGEETIVYCSATAFKAIPVRPSITRAYGRVDADGS 266
>gb|EXC25620.1| DNA damage-binding protein 1a [Morus notabilis]
Length = 976
Score = 101 bits (251), Expect = 1e-19
Identities = 55/101 (54%), Positives = 67/101 (66%)
Frame = -2
Query: 303 FLYGCSRPTVVVLYHKGDSYIRYVKIYEVSLETNVFVDCPWSLEKLIDDTAHSLISVPPP 124
FLYGCS+PT+VVLY R+VK YEVSL+ FV+ PWS L D+ A LI VPPP
Sbjct: 65 FLYGCSKPTIVVLYQDNKD-ARHVKTYEVSLKDKDFVEGPWSQNNL-DNGAALLIPVPPP 122
Query: 123 LCGFIIVGQHKIAYSCATTFKSIGIKLAIPWACERVDADGS 1
LCG +I+G+ I Y A FK+I IK +I A RVD+DGS
Sbjct: 123 LCGVLIIGEETIVYCSANAFKAIPIKPSITRAYGRVDSDGS 163
>ref|XP_004304711.1| PREDICTED: DNA damage-binding protein 1-like [Fragaria vesca subsp.
vesca]
Length = 1089
Score = 100 bits (250), Expect = 2e-19
Identities = 54/101 (53%), Positives = 67/101 (66%)
Frame = -2
Query: 303 FLYGCSRPTVVVLYHKGDSYIRYVKIYEVSLETNVFVDCPWSLEKLIDDTAHSLISVPPP 124
FLYGCS+PT+VVLY R+VK YEV+L+ FV+ PWS L D+ A LI VPPP
Sbjct: 168 FLYGCSKPTIVVLYQDNKD-ARHVKTYEVALKDKDFVEGPWSQNNL-DNGAELLIPVPPP 225
Query: 123 LCGFIIVGQHKIAYSCATTFKSIGIKLAIPWACERVDADGS 1
LCG +I+G+ I Y A FK+I I+ +I A RVDADGS
Sbjct: 226 LCGVLIIGEETIVYCSANAFKAIPIRPSITRAYGRVDADGS 266
>gb|EOX96952.1| Damaged DNA binding protein 1A isoform 3 [Theobroma cacao]
Length = 985
Score = 100 bits (249), Expect = 2e-19
Identities = 54/101 (53%), Positives = 67/101 (66%)
Frame = -2
Query: 303 FLYGCSRPTVVVLYHKGDSYIRYVKIYEVSLETNVFVDCPWSLEKLIDDTAHSLISVPPP 124
FLYGCS+PT+VVLY R+VK YEV+L+ FV+ PWS L D+ A LI VPPP
Sbjct: 65 FLYGCSKPTIVVLYQDNKD-ARHVKTYEVALKEKDFVEGPWSQNNL-DNGADLLIPVPPP 122
Query: 123 LCGFIIVGQHKIAYSCATTFKSIGIKLAIPWACERVDADGS 1
LCG +I+G+ I Y A FK+I I+ +I A RVDADGS
Sbjct: 123 LCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADGS 163
>gb|EOX96951.1| Damaged DNA binding protein 1A isoform 2 [Theobroma cacao]
Length = 1040
Score = 100 bits (249), Expect = 2e-19
Identities = 54/101 (53%), Positives = 67/101 (66%)
Frame = -2
Query: 303 FLYGCSRPTVVVLYHKGDSYIRYVKIYEVSLETNVFVDCPWSLEKLIDDTAHSLISVPPP 124
FLYGCS+PT+VVLY R+VK YEV+L+ FV+ PWS L D+ A LI VPPP
Sbjct: 120 FLYGCSKPTIVVLYQDNKD-ARHVKTYEVALKEKDFVEGPWSQNNL-DNGADLLIPVPPP 177
Query: 123 LCGFIIVGQHKIAYSCATTFKSIGIKLAIPWACERVDADGS 1
LCG +I+G+ I Y A FK+I I+ +I A RVDADGS
Sbjct: 178 LCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADGS 218
>gb|EOX96950.1| Damaged DNA binding protein 1A isoform 1 [Theobroma cacao]
Length = 1088
Score = 100 bits (249), Expect = 2e-19
Identities = 54/101 (53%), Positives = 67/101 (66%)
Frame = -2
Query: 303 FLYGCSRPTVVVLYHKGDSYIRYVKIYEVSLETNVFVDCPWSLEKLIDDTAHSLISVPPP 124
FLYGCS+PT+VVLY R+VK YEV+L+ FV+ PWS L D+ A LI VPPP
Sbjct: 168 FLYGCSKPTIVVLYQDNKD-ARHVKTYEVALKEKDFVEGPWSQNNL-DNGADLLIPVPPP 225
Query: 123 LCGFIIVGQHKIAYSCATTFKSIGIKLAIPWACERVDADGS 1
LCG +I+G+ I Y A FK+I I+ +I A RVDADGS
Sbjct: 226 LCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADGS 266
>emb|CBI30975.3| unnamed protein product [Vitis vinifera]
Length = 1043
Score = 99.8 bits (247), Expect = 3e-19
Identities = 53/101 (52%), Positives = 68/101 (67%)
Frame = -2
Query: 303 FLYGCSRPTVVVLYHKGDSYIRYVKIYEVSLETNVFVDCPWSLEKLIDDTAHSLISVPPP 124
FLYGCS+PT+VVLY R+VK YEV+L+ FV+ PW+ L D+ A LI VPPP
Sbjct: 168 FLYGCSKPTIVVLYQDNKD-ARHVKTYEVALKDKDFVEGPWAQNNL-DNGADLLIPVPPP 225
Query: 123 LCGFIIVGQHKIAYSCATTFKSIGIKLAIPWACERVDADGS 1
LCG +I+G+ I Y A+ FK+I I+ +I A RVDADGS
Sbjct: 226 LCGVLIIGEETIVYCSASAFKAIPIRPSITKAYGRVDADGS 266
>ref|XP_002280744.1| PREDICTED: DNA damage-binding protein 1 isoform 2 [Vitis vinifera]
Length = 1068
Score = 99.8 bits (247), Expect = 3e-19
Identities = 53/101 (52%), Positives = 68/101 (67%)
Frame = -2
Query: 303 FLYGCSRPTVVVLYHKGDSYIRYVKIYEVSLETNVFVDCPWSLEKLIDDTAHSLISVPPP 124
FLYGCS+PT+VVLY R+VK YEV+L+ FV+ PW+ L D+ A LI VPPP
Sbjct: 147 FLYGCSKPTIVVLYQDNKD-ARHVKTYEVALKDKDFVEGPWAQNNL-DNGADLLIPVPPP 204
Query: 123 LCGFIIVGQHKIAYSCATTFKSIGIKLAIPWACERVDADGS 1
LCG +I+G+ I Y A+ FK+I I+ +I A RVDADGS
Sbjct: 205 LCGVLIIGEETIVYCSASAFKAIPIRPSITKAYGRVDADGS 245
>ref|XP_002280735.1| PREDICTED: DNA damage-binding protein 1 isoform 1 [Vitis vinifera]
Length = 1089
Score = 99.8 bits (247), Expect = 3e-19
Identities = 53/101 (52%), Positives = 68/101 (67%)
Frame = -2
Query: 303 FLYGCSRPTVVVLYHKGDSYIRYVKIYEVSLETNVFVDCPWSLEKLIDDTAHSLISVPPP 124
FLYGCS+PT+VVLY R+VK YEV+L+ FV+ PW+ L D+ A LI VPPP
Sbjct: 168 FLYGCSKPTIVVLYQDNKD-ARHVKTYEVALKDKDFVEGPWAQNNL-DNGADLLIPVPPP 225
Query: 123 LCGFIIVGQHKIAYSCATTFKSIGIKLAIPWACERVDADGS 1
LCG +I+G+ I Y A+ FK+I I+ +I A RVDADGS
Sbjct: 226 LCGVLIIGEETIVYCSASAFKAIPIRPSITKAYGRVDADGS 266
>ref|XP_006468270.1| PREDICTED: DNA damage-binding protein 1a-like [Citrus sinensis]
Length = 1088
Score = 99.4 bits (246), Expect = 4e-19
Identities = 53/101 (52%), Positives = 67/101 (66%)
Frame = -2
Query: 303 FLYGCSRPTVVVLYHKGDSYIRYVKIYEVSLETNVFVDCPWSLEKLIDDTAHSLISVPPP 124
FLYGC++PT+VVLY R+VK YEV+L+ FV+ PWS L D+ A LI VPPP
Sbjct: 168 FLYGCAKPTIVVLYQDNKD-ARHVKTYEVALKDKDFVEGPWSQNNL-DNGADLLIPVPPP 225
Query: 123 LCGFIIVGQHKIAYSCATTFKSIGIKLAIPWACERVDADGS 1
LCG +I+G+ I Y A FK+I I+ +I A RVDADGS
Sbjct: 226 LCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADGS 266
>ref|XP_006448953.1| hypothetical protein CICLE_v10014106mg [Citrus clementina]
gi|557551564|gb|ESR62193.1| hypothetical protein
CICLE_v10014106mg [Citrus clementina]
Length = 1088
Score = 99.4 bits (246), Expect = 4e-19
Identities = 53/101 (52%), Positives = 67/101 (66%)
Frame = -2
Query: 303 FLYGCSRPTVVVLYHKGDSYIRYVKIYEVSLETNVFVDCPWSLEKLIDDTAHSLISVPPP 124
FLYGC++PT+VVLY R+VK YEV+L+ FV+ PWS L D+ A LI VPPP
Sbjct: 168 FLYGCAKPTIVVLYQDNKD-ARHVKTYEVALKDKDFVEGPWSQNNL-DNGADLLIPVPPP 225
Query: 123 LCGFIIVGQHKIAYSCATTFKSIGIKLAIPWACERVDADGS 1
LCG +I+G+ I Y A FK+I I+ +I A RVDADGS
Sbjct: 226 LCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADGS 266
>gb|EMJ14913.1| hypothetical protein PRUPE_ppa000579mg [Prunus persica]
Length = 1089
Score = 99.4 bits (246), Expect = 4e-19
Identities = 53/101 (52%), Positives = 67/101 (66%)
Frame = -2
Query: 303 FLYGCSRPTVVVLYHKGDSYIRYVKIYEVSLETNVFVDCPWSLEKLIDDTAHSLISVPPP 124
FLYGCS+PT+VVLY R+VK YEV+L+ FV+ PW+ L D+ A LI VPPP
Sbjct: 168 FLYGCSKPTIVVLYQDNKD-ARHVKTYEVALKDKDFVEGPWAQNNL-DNGADLLIPVPPP 225
Query: 123 LCGFIIVGQHKIAYSCATTFKSIGIKLAIPWACERVDADGS 1
LCG +I+G+ I Y A FK+I I+ +I A RVDADGS
Sbjct: 226 LCGVLIIGEETIVYCSANAFKAIPIRPSITRAYGRVDADGS 266
>ref|XP_006359100.1| PREDICTED: DNA damage-binding protein 1-like isoform X2 [Solanum
tuberosum]
Length = 1090
Score = 98.6 bits (244), Expect = 8e-19
Identities = 52/101 (51%), Positives = 67/101 (66%)
Frame = -2
Query: 303 FLYGCSRPTVVVLYHKGDSYIRYVKIYEVSLETNVFVDCPWSLEKLIDDTAHSLISVPPP 124
FLYGC +PT+VVLY R+VK YEVSL+ F++ PW+ L D+ A LI VPPP
Sbjct: 168 FLYGCPKPTIVVLYQDNKD-ARHVKTYEVSLKDKDFIEGPWAQNNL-DNGASLLIPVPPP 225
Query: 123 LCGFIIVGQHKIAYSCATTFKSIGIKLAIPWACERVDADGS 1
LCG +I+G+ I Y A+ FK+I I+ +I A RVDADGS
Sbjct: 226 LCGVLIIGEETIVYCSASAFKAIPIRPSITRAYGRVDADGS 266
>ref|XP_006359099.1| PREDICTED: DNA damage-binding protein 1-like isoform X1 [Solanum
tuberosum]
Length = 1095
Score = 98.6 bits (244), Expect = 8e-19
Identities = 52/101 (51%), Positives = 67/101 (66%)
Frame = -2
Query: 303 FLYGCSRPTVVVLYHKGDSYIRYVKIYEVSLETNVFVDCPWSLEKLIDDTAHSLISVPPP 124
FLYGC +PT+VVLY R+VK YEVSL+ F++ PW+ L D+ A LI VPPP
Sbjct: 173 FLYGCPKPTIVVLYQDNKD-ARHVKTYEVSLKDKDFIEGPWAQNNL-DNGASLLIPVPPP 230
Query: 123 LCGFIIVGQHKIAYSCATTFKSIGIKLAIPWACERVDADGS 1
LCG +I+G+ I Y A+ FK+I I+ +I A RVDADGS
Sbjct: 231 LCGVLIIGEETIVYCSASAFKAIPIRPSITRAYGRVDADGS 271
>sp|Q6E7D1.1|DDB1_SOLCE RecName: Full=DNA damage-binding protein 1; AltName:
Full=UV-damaged DNA-binding protein 1
gi|49484911|gb|AAT66742.1| UV-damaged DNA binding
protein 1 [Solanum cheesmaniae]
Length = 1095
Score = 98.6 bits (244), Expect = 8e-19
Identities = 52/101 (51%), Positives = 67/101 (66%)
Frame = -2
Query: 303 FLYGCSRPTVVVLYHKGDSYIRYVKIYEVSLETNVFVDCPWSLEKLIDDTAHSLISVPPP 124
FLYGC +PT+VVLY R+VK YEVSL+ F++ PW+ L D+ A LI VPPP
Sbjct: 173 FLYGCPKPTIVVLYQDNKD-ARHVKTYEVSLKDKDFIEGPWAQNNL-DNGASLLIPVPPP 230
Query: 123 LCGFIIVGQHKIAYSCATTFKSIGIKLAIPWACERVDADGS 1
LCG +I+G+ I Y A+ FK+I I+ +I A RVDADGS
Sbjct: 231 LCGVLIIGEETIVYCSASAFKAIPIRPSITRAYGRVDADGS 271
>ref|NP_001234275.1| DNA damage-binding protein 1 [Solanum lycopersicum]
gi|350539125|ref|NP_001233864.1| UV damaged DNA binding
protein 1 [Solanum lycopersicum]
gi|55976440|sp|Q6QNU4.1|DDB1_SOLLC RecName: Full=DNA
damage-binding protein 1; AltName: Full=High
pigmentation protein 1; AltName: Full=UV-damaged
DNA-binding protein 1 gi|38455768|gb|AAR20885.1| UV
damaged DNA binding protein 1 [Solanum lycopersicum]
gi|42602165|gb|AAS21683.1| UV-damaged DNA binding
protein 1 [Solanum lycopersicum]
Length = 1090
Score = 98.6 bits (244), Expect = 8e-19
Identities = 52/101 (51%), Positives = 67/101 (66%)
Frame = -2
Query: 303 FLYGCSRPTVVVLYHKGDSYIRYVKIYEVSLETNVFVDCPWSLEKLIDDTAHSLISVPPP 124
FLYGC +PT+VVLY R+VK YEVSL+ F++ PW+ L D+ A LI VPPP
Sbjct: 168 FLYGCPKPTIVVLYQDNKD-ARHVKTYEVSLKDKDFIEGPWAQNNL-DNGASLLIPVPPP 225
Query: 123 LCGFIIVGQHKIAYSCATTFKSIGIKLAIPWACERVDADGS 1
LCG +I+G+ I Y A+ FK+I I+ +I A RVDADGS
Sbjct: 226 LCGVLIIGEETIVYCSASAFKAIPIRPSITRAYGRVDADGS 266
>ref|XP_003531313.1| PREDICTED: DNA damage-binding protein 1-like isoform 1 [Glycine
max]
Length = 1089
Score = 98.6 bits (244), Expect = 8e-19
Identities = 53/101 (52%), Positives = 66/101 (65%)
Frame = -2
Query: 303 FLYGCSRPTVVVLYHKGDSYIRYVKIYEVSLETNVFVDCPWSLEKLIDDTAHSLISVPPP 124
FLYGCS+PT+VVLY R+VK YEV+L+ FV+ PWS L D+ A LI VPPP
Sbjct: 168 FLYGCSKPTIVVLYQDNKD-ARHVKTYEVALKDKDFVEGPWSQNNL-DNGADLLIPVPPP 225
Query: 123 LCGFIIVGQHKIAYSCATTFKSIGIKLAIPWACERVDADGS 1
LCG +I+G+ I Y A FK+I I+ +I A RVD DGS
Sbjct: 226 LCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDPDGS 266
>ref|XP_003630019.1| DNA damage-binding protein [Medicago truncatula]
gi|355524041|gb|AET04495.1| DNA damage-binding protein
[Medicago truncatula]
Length = 1171
Score = 97.8 bits (242), Expect = 1e-18
Identities = 53/101 (52%), Positives = 65/101 (64%)
Frame = -2
Query: 303 FLYGCSRPTVVVLYHKGDSYIRYVKIYEVSLETNVFVDCPWSLEKLIDDTAHSLISVPPP 124
FLYGC +PT+VVLY R+VK YEV+L+ FV+ PWS L D+ A LI VPPP
Sbjct: 168 FLYGCPKPTIVVLYQDNKD-ARHVKTYEVALKDKDFVEGPWSQNSL-DNGADLLIPVPPP 225
Query: 123 LCGFIIVGQHKIAYSCATTFKSIGIKLAIPWACERVDADGS 1
LCG +I+G+ I Y A FK+I I+ AI A RVD DGS
Sbjct: 226 LCGVLIIGEETIVYCSANGFKAIPIRAAITKAYGRVDPDGS 266