BLASTX nr result
ID: Rheum21_contig00028095
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00028095
(322 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002274201.1| PREDICTED: protein SMG9 [Vitis vinifera] gi|... 105 5e-21
ref|XP_004231766.1| PREDICTED: protein SMG9-like isoform 1 [Sola... 102 7e-20
ref|XP_004160636.1| PREDICTED: LOW QUALITY PROTEIN: protein SMG9... 102 7e-20
ref|XP_004147641.1| PREDICTED: protein SMG9-like [Cucumis sativus] 102 7e-20
ref|XP_003516730.1| PREDICTED: protein SMG9-like [Glycine max] 101 9e-20
ref|XP_006338710.1| PREDICTED: protein SMG9-like isoform X3 [Sol... 100 3e-19
ref|XP_006338708.1| PREDICTED: protein SMG9-like isoform X1 [Sol... 100 3e-19
ref|XP_004307869.1| PREDICTED: protein SMG9-like [Fragaria vesca... 99 4e-19
gb|ESW29050.1| hypothetical protein PHAVU_002G039600g [Phaseolus... 98 1e-18
gb|EOX92606.1| Uncharacterized protein isoform 2 [Theobroma cacao] 98 1e-18
gb|EOX92605.1| Uncharacterized protein isoform 1 [Theobroma cacao] 98 1e-18
ref|XP_002328983.1| predicted protein [Populus trichocarpa] gi|5... 96 5e-18
ref|XP_003538657.1| PREDICTED: protein SMG9-like [Glycine max] 94 1e-17
ref|XP_004511426.1| PREDICTED: protein SMG9-like isoform X2 [Cic... 92 7e-17
ref|XP_004511425.1| PREDICTED: protein SMG9-like isoform X1 [Cic... 92 7e-17
ref|XP_003610849.1| Protein SMG9 [Medicago truncatula] gi|355512... 92 7e-17
ref|XP_002873799.1| hypothetical protein ARALYDRAFT_326131 [Arab... 91 1e-16
gb|EXB29165.1| hypothetical protein L484_019690 [Morus notabilis] 90 3e-16
gb|EPS69076.1| hypothetical protein M569_05696, partial [Genlise... 86 7e-15
ref|XP_006443195.1| hypothetical protein CICLE_v10020455mg [Citr... 84 2e-14
>ref|XP_002274201.1| PREDICTED: protein SMG9 [Vitis vinifera]
gi|297737327|emb|CBI26528.3| unnamed protein product
[Vitis vinifera]
Length = 419
Score = 105 bits (263), Expect = 5e-21
Identities = 58/101 (57%), Positives = 64/101 (63%), Gaps = 3/101 (2%)
Frame = -3
Query: 296 SGANGSTLSSGSSPAP--KILLAKPGIASSGPXXXXXXXXXXXXXXXXXXXXXXXI-RSR 126
+GA G SS SPAP KILLAKPG+ ++G RSR
Sbjct: 2 AGATGGAGSSNPSPAPAPKILLAKPGLVTTGSVSSKLIRSGAAGGGGGGAEDESVSLRSR 61
Query: 125 LPPVGSLNLLSDSWEFQIDRFLPFLTDNTDFTVVGVVGPPG 3
LPP+GSLNLLSDSWEF DRFLPFLTDNTDFTVVGV+GPPG
Sbjct: 62 LPPIGSLNLLSDSWEFHTDRFLPFLTDNTDFTVVGVIGPPG 102
>ref|XP_004231766.1| PREDICTED: protein SMG9-like isoform 1 [Solanum lycopersicum]
gi|460371889|ref|XP_004231767.1| PREDICTED: protein
SMG9-like isoform 2 [Solanum lycopersicum]
gi|460371891|ref|XP_004231768.1| PREDICTED: protein
SMG9-like isoform 3 [Solanum lycopersicum]
Length = 404
Score = 102 bits (253), Expect = 7e-20
Identities = 58/102 (56%), Positives = 63/102 (61%), Gaps = 1/102 (0%)
Frame = -3
Query: 305 MASSGAN-GSTLSSGSSPAPKILLAKPGIASSGPXXXXXXXXXXXXXXXXXXXXXXXIRS 129
MA SG N S SS S APKILLAKPG+ S+G R
Sbjct: 1 MAGSGGNLSSNQSSVSHQAPKILLAKPGLVSAGKFNRGGPDDDPAAH-----------RP 49
Query: 128 RLPPVGSLNLLSDSWEFQIDRFLPFLTDNTDFTVVGVVGPPG 3
RLP VGSLNLLSD+W+F DRFLPFLTDNTDFTVVGV+GPPG
Sbjct: 50 RLPSVGSLNLLSDTWDFHTDRFLPFLTDNTDFTVVGVIGPPG 91
>ref|XP_004160636.1| PREDICTED: LOW QUALITY PROTEIN: protein SMG9-like [Cucumis sativus]
Length = 411
Score = 102 bits (253), Expect = 7e-20
Identities = 53/99 (53%), Positives = 63/99 (63%)
Frame = -3
Query: 299 SSGANGSTLSSGSSPAPKILLAKPGIASSGPXXXXXXXXXXXXXXXXXXXXXXXIRSRLP 120
S+GAN S+ SS + P PKILLAKPG+ GP RSRLP
Sbjct: 4 STGANSSSNSSPAPPPPKILLAKPGLVPGGPINSKIGRGAGADDEPASI------RSRLP 57
Query: 119 PVGSLNLLSDSWEFQIDRFLPFLTDNTDFTVVGVVGPPG 3
+GSLNLLSDSW+ IDRFLPFLT+NT+F VVG++GPPG
Sbjct: 58 SLGSLNLLSDSWDLHIDRFLPFLTENTEFKVVGIIGPPG 96
>ref|XP_004147641.1| PREDICTED: protein SMG9-like [Cucumis sativus]
Length = 412
Score = 102 bits (253), Expect = 7e-20
Identities = 53/99 (53%), Positives = 63/99 (63%)
Frame = -3
Query: 299 SSGANGSTLSSGSSPAPKILLAKPGIASSGPXXXXXXXXXXXXXXXXXXXXXXXIRSRLP 120
S+GAN S+ SS + P PKILLAKPG+ GP RSRLP
Sbjct: 4 STGANSSSNSSPAPPPPKILLAKPGLVPGGPINSKIGRGAGADDEPASI------RSRLP 57
Query: 119 PVGSLNLLSDSWEFQIDRFLPFLTDNTDFTVVGVVGPPG 3
+GSLNLLSDSW+ IDRFLPFLT+NT+F VVG++GPPG
Sbjct: 58 SLGSLNLLSDSWDLHIDRFLPFLTENTEFKVVGIIGPPG 96
>ref|XP_003516730.1| PREDICTED: protein SMG9-like [Glycine max]
Length = 392
Score = 101 bits (252), Expect = 9e-20
Identities = 51/89 (57%), Positives = 59/89 (66%)
Frame = -3
Query: 269 SGSSPAPKILLAKPGIASSGPXXXXXXXXXXXXXXXXXXXXXXXIRSRLPPVGSLNLLSD 90
+GS P+PKILLAKPG+ + GP RSRLP V SLNLLSD
Sbjct: 2 AGSEPSPKILLAKPGLVTGGPVAGKFGRGGGGDDDSPQL------RSRLPSVASLNLLSD 55
Query: 89 SWEFQIDRFLPFLTDNTDFTVVGVVGPPG 3
SW+F IDRFLPFLT+NTDFTV+GV+GPPG
Sbjct: 56 SWDFHIDRFLPFLTENTDFTVIGVIGPPG 84
>ref|XP_006338710.1| PREDICTED: protein SMG9-like isoform X3 [Solanum tuberosum]
Length = 404
Score = 99.8 bits (247), Expect = 3e-19
Identities = 57/102 (55%), Positives = 62/102 (60%), Gaps = 1/102 (0%)
Frame = -3
Query: 305 MASSGAN-GSTLSSGSSPAPKILLAKPGIASSGPXXXXXXXXXXXXXXXXXXXXXXXIRS 129
M SG N S SS S APKILLAKPG+ S+G R
Sbjct: 1 MTGSGGNLSSNQSSVSHQAPKILLAKPGLVSAGKFNRGGPDDDSAAH-----------RP 49
Query: 128 RLPPVGSLNLLSDSWEFQIDRFLPFLTDNTDFTVVGVVGPPG 3
RLP VGSLNLLSD+W+F DRFLPFLTDNTDFTVVGV+GPPG
Sbjct: 50 RLPSVGSLNLLSDTWDFLTDRFLPFLTDNTDFTVVGVIGPPG 91
>ref|XP_006338708.1| PREDICTED: protein SMG9-like isoform X1 [Solanum tuberosum]
gi|565343165|ref|XP_006338709.1| PREDICTED: protein
SMG9-like isoform X2 [Solanum tuberosum]
Length = 405
Score = 99.8 bits (247), Expect = 3e-19
Identities = 57/102 (55%), Positives = 62/102 (60%), Gaps = 1/102 (0%)
Frame = -3
Query: 305 MASSGAN-GSTLSSGSSPAPKILLAKPGIASSGPXXXXXXXXXXXXXXXXXXXXXXXIRS 129
M SG N S SS S APKILLAKPG+ S+G R
Sbjct: 1 MTGSGGNLSSNQSSVSHQAPKILLAKPGLVSAGKFNRGGPDDDSAAH-----------RP 49
Query: 128 RLPPVGSLNLLSDSWEFQIDRFLPFLTDNTDFTVVGVVGPPG 3
RLP VGSLNLLSD+W+F DRFLPFLTDNTDFTVVGV+GPPG
Sbjct: 50 RLPSVGSLNLLSDTWDFLTDRFLPFLTDNTDFTVVGVIGPPG 91
>ref|XP_004307869.1| PREDICTED: protein SMG9-like [Fragaria vesca subsp. vesca]
Length = 407
Score = 99.4 bits (246), Expect = 4e-19
Identities = 55/96 (57%), Positives = 63/96 (65%), Gaps = 2/96 (2%)
Frame = -3
Query: 284 GSTLSSGSSPA--PKILLAKPGIASSGPXXXXXXXXXXXXXXXXXXXXXXXIRSRLPPVG 111
GST SSG+ P+ PKILLAKPG+ + P RSRLP +G
Sbjct: 3 GST-SSGAGPSNPPKILLAKPGLVTGSPVAGKYGRGGSGDENTASL------RSRLPSIG 55
Query: 110 SLNLLSDSWEFQIDRFLPFLTDNTDFTVVGVVGPPG 3
SLNLLSDSW+F IDRFLPFLTDNT+FTVVGV+GPPG
Sbjct: 56 SLNLLSDSWDFHIDRFLPFLTDNTEFTVVGVIGPPG 91
>gb|ESW29050.1| hypothetical protein PHAVU_002G039600g [Phaseolus vulgaris]
Length = 396
Score = 97.8 bits (242), Expect = 1e-18
Identities = 50/89 (56%), Positives = 57/89 (64%)
Frame = -3
Query: 269 SGSSPAPKILLAKPGIASSGPXXXXXXXXXXXXXXXXXXXXXXXIRSRLPPVGSLNLLSD 90
S SP+PKILLAKPG+ + GP RSR P V SLNLLSD
Sbjct: 4 SEPSPSPKILLAKPGLVTGGPVAGKFGRGGAGDDDSVQL------RSRFPSVASLNLLSD 57
Query: 89 SWEFQIDRFLPFLTDNTDFTVVGVVGPPG 3
SW+F IDRFLPFLT+NTDFTV+GV+GPPG
Sbjct: 58 SWDFHIDRFLPFLTENTDFTVIGVIGPPG 86
>gb|EOX92606.1| Uncharacterized protein isoform 2 [Theobroma cacao]
Length = 370
Score = 97.8 bits (242), Expect = 1e-18
Identities = 56/101 (55%), Positives = 64/101 (63%), Gaps = 3/101 (2%)
Frame = -3
Query: 296 SGANGSTLSSGSSP---APKILLAKPGIASSGPXXXXXXXXXXXXXXXXXXXXXXXIRSR 126
+G+ G T SS SP APKILLAKP S+GP R+R
Sbjct: 2 AGSIGGTGSSNPSPNPSAPKILLAKP---SAGPVPGKFGRGGVEDETAPH-------RAR 51
Query: 125 LPPVGSLNLLSDSWEFQIDRFLPFLTDNTDFTVVGVVGPPG 3
LPPVGSLNLLSDSWEF IDRFLPFLT+NTDF V+G++GPPG
Sbjct: 52 LPPVGSLNLLSDSWEFHIDRFLPFLTENTDFMVIGIIGPPG 92
>gb|EOX92605.1| Uncharacterized protein isoform 1 [Theobroma cacao]
Length = 395
Score = 97.8 bits (242), Expect = 1e-18
Identities = 56/101 (55%), Positives = 64/101 (63%), Gaps = 3/101 (2%)
Frame = -3
Query: 296 SGANGSTLSSGSSP---APKILLAKPGIASSGPXXXXXXXXXXXXXXXXXXXXXXXIRSR 126
+G+ G T SS SP APKILLAKP S+GP R+R
Sbjct: 2 AGSIGGTGSSNPSPNPSAPKILLAKP---SAGPVPGKFGRGGVEDETAPH-------RAR 51
Query: 125 LPPVGSLNLLSDSWEFQIDRFLPFLTDNTDFTVVGVVGPPG 3
LPPVGSLNLLSDSWEF IDRFLPFLT+NTDF V+G++GPPG
Sbjct: 52 LPPVGSLNLLSDSWEFHIDRFLPFLTENTDFMVIGIIGPPG 92
>ref|XP_002328983.1| predicted protein [Populus trichocarpa]
gi|566200067|ref|XP_006376009.1| hypothetical protein
POPTR_0013s07930g [Populus trichocarpa]
gi|550325231|gb|ERP53806.1| hypothetical protein
POPTR_0013s07930g [Populus trichocarpa]
Length = 408
Score = 95.9 bits (237), Expect = 5e-18
Identities = 52/91 (57%), Positives = 59/91 (64%), Gaps = 1/91 (1%)
Frame = -3
Query: 272 SSGSSPAPKILLAKP-GIASSGPXXXXXXXXXXXXXXXXXXXXXXXIRSRLPPVGSLNLL 96
SS S APKILLAKP G+ +SGP RSRLP + SLNLL
Sbjct: 5 SSSQSQAPKILLAKPPGLVTSGPAVSAAAAKFGREDETAPHHHH---RSRLPSITSLNLL 61
Query: 95 SDSWEFQIDRFLPFLTDNTDFTVVGVVGPPG 3
SDSW+F IDRFLPFLT+NTDFTVVG++GPPG
Sbjct: 62 SDSWDFHIDRFLPFLTENTDFTVVGIIGPPG 92
>ref|XP_003538657.1| PREDICTED: protein SMG9-like [Glycine max]
Length = 393
Score = 94.4 bits (233), Expect = 1e-17
Identities = 48/89 (53%), Positives = 57/89 (64%)
Frame = -3
Query: 269 SGSSPAPKILLAKPGIASSGPXXXXXXXXXXXXXXXXXXXXXXXIRSRLPPVGSLNLLSD 90
+GS +PKILLAKPG+ + GP RSRLP SLNLLSD
Sbjct: 2 AGSEASPKILLAKPGLVTGGPVAGKFGRGGGGDDDSTQL------RSRLPSAASLNLLSD 55
Query: 89 SWEFQIDRFLPFLTDNTDFTVVGVVGPPG 3
SW+F+IDRFLPFLT+NTDFTV+GV+G PG
Sbjct: 56 SWDFRIDRFLPFLTENTDFTVIGVIGSPG 84
>ref|XP_004511426.1| PREDICTED: protein SMG9-like isoform X2 [Cicer arietinum]
Length = 396
Score = 92.0 bits (227), Expect = 7e-17
Identities = 47/86 (54%), Positives = 54/86 (62%)
Frame = -3
Query: 260 SPAPKILLAKPGIASSGPXXXXXXXXXXXXXXXXXXXXXXXIRSRLPPVGSLNLLSDSWE 81
SP+PKILLAKP + + G RSRLP V SLNLLSDSW+
Sbjct: 7 SPSPKILLAKPALVTGGTVAGKFSRGGAAEEDSSQL------RSRLPSVASLNLLSDSWD 60
Query: 80 FQIDRFLPFLTDNTDFTVVGVVGPPG 3
F DRFLPFLT+NTDFTV+GV+GPPG
Sbjct: 61 FHFDRFLPFLTENTDFTVIGVIGPPG 86
>ref|XP_004511425.1| PREDICTED: protein SMG9-like isoform X1 [Cicer arietinum]
Length = 399
Score = 92.0 bits (227), Expect = 7e-17
Identities = 47/86 (54%), Positives = 54/86 (62%)
Frame = -3
Query: 260 SPAPKILLAKPGIASSGPXXXXXXXXXXXXXXXXXXXXXXXIRSRLPPVGSLNLLSDSWE 81
SP+PKILLAKP + + G RSRLP V SLNLLSDSW+
Sbjct: 7 SPSPKILLAKPALVTGGTVAGKFSRGGAAEEDSSQL------RSRLPSVASLNLLSDSWD 60
Query: 80 FQIDRFLPFLTDNTDFTVVGVVGPPG 3
F DRFLPFLT+NTDFTV+GV+GPPG
Sbjct: 61 FHFDRFLPFLTENTDFTVIGVIGPPG 86
>ref|XP_003610849.1| Protein SMG9 [Medicago truncatula] gi|355512184|gb|AES93807.1|
Protein SMG9 [Medicago truncatula]
Length = 396
Score = 92.0 bits (227), Expect = 7e-17
Identities = 47/86 (54%), Positives = 54/86 (62%)
Frame = -3
Query: 260 SPAPKILLAKPGIASSGPXXXXXXXXXXXXXXXXXXXXXXXIRSRLPPVGSLNLLSDSWE 81
SP+PKILLAKPG+ + P RSRLP V SLNLLSDSW+
Sbjct: 7 SPSPKILLAKPGLVTGAPISGKFNRSGAGEDDSTQH------RSRLPSVASLNLLSDSWD 60
Query: 80 FQIDRFLPFLTDNTDFTVVGVVGPPG 3
F DRFLPFLT+NTDFTV+GV+G PG
Sbjct: 61 FHFDRFLPFLTENTDFTVIGVIGSPG 86
>ref|XP_002873799.1| hypothetical protein ARALYDRAFT_326131 [Arabidopsis lyrata subsp.
lyrata] gi|297319636|gb|EFH50058.1| hypothetical protein
ARALYDRAFT_326131 [Arabidopsis lyrata subsp. lyrata]
Length = 372
Score = 91.3 bits (225), Expect = 1e-16
Identities = 50/88 (56%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
Frame = -3
Query: 263 SSPA-PKILLAKPGIASSGPXXXXXXXXXXXXXXXXXXXXXXXIRSRLPPVGSLNLLSDS 87
SSPA PKILLAKP ++ RSRLPPV SLN+LSDS
Sbjct: 2 SSPAAPKILLAKPSVSP----------ITGKFGRGNSDDDNASHRSRLPPVSSLNMLSDS 51
Query: 86 WEFQIDRFLPFLTDNTDFTVVGVVGPPG 3
W+F IDRFLPFLT+NTDFTVVGV+GPPG
Sbjct: 52 WDFHIDRFLPFLTENTDFTVVGVIGPPG 79
>gb|EXB29165.1| hypothetical protein L484_019690 [Morus notabilis]
Length = 467
Score = 89.7 bits (221), Expect = 3e-16
Identities = 54/112 (48%), Positives = 66/112 (58%), Gaps = 10/112 (8%)
Frame = -3
Query: 308 KMASSGANGST--LSSGSSPA--PKILLAKPGIASSGPXXXXXXXXXXXXXXXXXXXXXX 141
KMA SG+ G + LS+ SS + PKILLAKP + + P
Sbjct: 39 KMAGSGSTGGSGQLSNPSSASLPPKILLAKPALVTGAPVPGKFSRGGGGGAGVDDDTASL 98
Query: 140 XIRSRLPPVGSLNLLSDSWEFQIDRFLP------FLTDNTDFTVVGVVGPPG 3
RSRLP +GSLNLLS+SW+F IDRFLP FLT+NTDF V+GV+GPPG
Sbjct: 99 --RSRLPSIGSLNLLSESWDFHIDRFLPGCWKLKFLTENTDFAVIGVIGPPG 148
>gb|EPS69076.1| hypothetical protein M569_05696, partial [Genlisea aurea]
Length = 210
Score = 85.5 bits (210), Expect = 7e-15
Identities = 46/90 (51%), Positives = 56/90 (62%)
Frame = -3
Query: 272 SSGSSPAPKILLAKPGIASSGPXXXXXXXXXXXXXXXXXXXXXXXIRSRLPPVGSLNLLS 93
+S ++ APKILLAKPG+ + RSRLP +GSLNLL+
Sbjct: 1 ASNTAHAPKILLAKPGLVNRAASSAVGGAEEDSAASL---------RSRLPSLGSLNLLN 51
Query: 92 DSWEFQIDRFLPFLTDNTDFTVVGVVGPPG 3
DSW+FQIDRFLP LTDNT+FTVVGV+G G
Sbjct: 52 DSWDFQIDRFLPVLTDNTEFTVVGVIGSTG 81
>ref|XP_006443195.1| hypothetical protein CICLE_v10020455mg [Citrus clementina]
gi|568850422|ref|XP_006478913.1| PREDICTED: protein
SMG9-like [Citrus sinensis] gi|557545457|gb|ESR56435.1|
hypothetical protein CICLE_v10020455mg [Citrus
clementina]
Length = 401
Score = 83.6 bits (205), Expect = 2e-14
Identities = 48/90 (53%), Positives = 54/90 (60%)
Frame = -3
Query: 272 SSGSSPAPKILLAKPGIASSGPXXXXXXXXXXXXXXXXXXXXXXXIRSRLPPVGSLNLLS 93
SS S PKILLAKPG+ S G RSRLP SLNLLS
Sbjct: 6 SSNPSSGPKILLAKPGLVSGGAVGGKFGRGEDETVPHVHPHPL---RSRLP---SLNLLS 59
Query: 92 DSWEFQIDRFLPFLTDNTDFTVVGVVGPPG 3
DSW+F IDRFLPFL++NT+FTVVGV+G PG
Sbjct: 60 DSWDFHIDRFLPFLSENTEFTVVGVIGVPG 89