BLASTX nr result
ID: Rheum21_contig00028054
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00028054
(353 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006338053.1| PREDICTED: pentatricopeptide repeat-containi... 72 1e-10
ref|XP_004237999.1| PREDICTED: pentatricopeptide repeat-containi... 71 1e-10
ref|XP_006593024.1| PREDICTED: pentatricopeptide repeat-containi... 71 2e-10
gb|EPS72326.1| hypothetical protein M569_02437, partial [Genlise... 70 3e-10
ref|XP_004309881.1| PREDICTED: pentatricopeptide repeat-containi... 69 9e-10
gb|EMJ07699.1| hypothetical protein PRUPE_ppa019170mg [Prunus pe... 66 1e-09
gb|ESW04178.1| hypothetical protein PHAVU_011G073100g [Phaseolus... 67 2e-09
gb|EOY33083.1| Tetratricopeptide repeat-like superfamily protein... 67 2e-09
ref|XP_004167072.1| PREDICTED: pentatricopeptide repeat-containi... 64 4e-09
ref|XP_004147297.1| PREDICTED: pentatricopeptide repeat-containi... 64 4e-09
ref|XP_006294242.1| hypothetical protein CARUB_v10023241mg [Caps... 64 2e-08
ref|NP_001154742.1| pentatricopeptide (PPR) repeat-containing pr... 64 2e-08
ref|NP_198082.4| pentatricopeptide (PPR) repeat-containing prote... 64 2e-08
ref|XP_006409790.1| hypothetical protein EUTSA_v10016739mg [Eutr... 64 2e-08
ref|XP_003606459.1| Pentatricopeptide repeat-containing protein ... 64 2e-08
ref|XP_006424630.1| hypothetical protein CICLE_v10028524mg [Citr... 64 3e-08
emb|CBI16275.3| unnamed protein product [Vitis vinifera] 64 3e-08
ref|XP_002324476.2| hypothetical protein POPTR_0018s10150g [Popu... 63 5e-08
ref|NP_180348.2| pentatricopeptide repeat-containing protein [Ar... 62 6e-08
gb|AAC73020.1| hypothetical protein [Arabidopsis thaliana] 62 6e-08
>ref|XP_006338053.1| PREDICTED: pentatricopeptide repeat-containing protein At2g27800,
mitochondrial-like isoform X1 [Solanum tuberosum]
gi|565341791|ref|XP_006338054.1| PREDICTED:
pentatricopeptide repeat-containing protein At2g27800,
mitochondrial-like isoform X2 [Solanum tuberosum]
Length = 451
Score = 71.6 bits (174), Expect = 1e-10
Identities = 33/56 (58%), Positives = 42/56 (75%)
Frame = -2
Query: 250 DEARFNKAKSLLPPRFTVDHLHDVIVREEDPLVCLELFNWASQRPRFMLNVLSEHL 83
DE++F A S LPPRFT + L DV+V + DPLVCLELFNWAS++ RF NV + H+
Sbjct: 123 DESQFQNAVSQLPPRFTPEELRDVMVSQRDPLVCLELFNWASKQHRFRHNVSTYHV 178
>ref|XP_004237999.1| PREDICTED: pentatricopeptide repeat-containing protein At2g27800,
mitochondrial-like isoform 1 [Solanum lycopersicum]
gi|460384604|ref|XP_004238000.1| PREDICTED:
pentatricopeptide repeat-containing protein At2g27800,
mitochondrial-like isoform 2 [Solanum lycopersicum]
Length = 451
Score = 71.2 bits (173), Expect = 1e-10
Identities = 33/56 (58%), Positives = 42/56 (75%)
Frame = -2
Query: 250 DEARFNKAKSLLPPRFTVDHLHDVIVREEDPLVCLELFNWASQRPRFMLNVLSEHL 83
DE++F A S LPPRFT + L DV+V + DPLVCLELFNWAS++ RF NV + H+
Sbjct: 123 DESQFQNAVSQLPPRFTPEELRDVMVLQRDPLVCLELFNWASKQHRFRHNVSTYHV 178
>ref|XP_006593024.1| PREDICTED: pentatricopeptide repeat-containing protein At2g27800,
mitochondrial-like, partial [Glycine max]
Length = 574
Score = 70.9 bits (172), Expect = 2e-10
Identities = 33/56 (58%), Positives = 43/56 (76%)
Frame = -2
Query: 250 DEARFNKAKSLLPPRFTVDHLHDVIVREEDPLVCLELFNWASQRPRFMLNVLSEHL 83
D+A+F A S LPPRFT + L +VI R+ DPLVCLELF+WASQ+PRF +V + H+
Sbjct: 182 DQAQFQLALSQLPPRFTPEELCNVIARQNDPLVCLELFHWASQQPRFRHDVSTFHI 237
>gb|EPS72326.1| hypothetical protein M569_02437, partial [Genlisea aurea]
Length = 184
Score = 70.1 bits (170), Expect = 3e-10
Identities = 33/56 (58%), Positives = 41/56 (73%)
Frame = -2
Query: 250 DEARFNKAKSLLPPRFTVDHLHDVIVREEDPLVCLELFNWASQRPRFMLNVLSEHL 83
+E F K S +P RFT + LHDVI +EDPLVCLELFNWAS++ RF NVL+ H+
Sbjct: 36 NEPLFQKVLSQIPARFTNEDLHDVIALQEDPLVCLELFNWASKQHRFRHNVLTFHI 91
>ref|XP_004309881.1| PREDICTED: pentatricopeptide repeat-containing protein At2g27800,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 441
Score = 68.6 bits (166), Expect = 9e-10
Identities = 32/56 (57%), Positives = 43/56 (76%)
Frame = -2
Query: 250 DEARFNKAKSLLPPRFTVDHLHDVIVREEDPLVCLELFNWASQRPRFMLNVLSEHL 83
++A+F K+ S L PRFT + L D+I ++EDPLVCLELFNWASQ+ RF +V S H+
Sbjct: 111 NQAQFQKSVSQLLPRFTPEELGDIITKQEDPLVCLELFNWASQQLRFKHDVNSYHI 166
>gb|EMJ07699.1| hypothetical protein PRUPE_ppa019170mg [Prunus persica]
Length = 369
Score = 65.9 bits (159), Expect(2) = 1e-09
Identities = 30/52 (57%), Positives = 40/52 (76%)
Frame = -2
Query: 250 DEARFNKAKSLLPPRFTVDHLHDVIVREEDPLVCLELFNWASQRPRFMLNVL 95
DE +F +A S L PRFT + L +VI +++DP+VCLELFNWASQ+PRF + L
Sbjct: 75 DEVQFQRAISQLLPRFTPEELCNVITQQDDPIVCLELFNWASQQPRFKHDAL 126
Score = 22.3 bits (46), Expect(2) = 1e-09
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -3
Query: 318 YSSSPSGSSVRAYRKRVNKRLREMK 244
YS+ P R++R+R NKR++ K
Sbjct: 50 YSTKPPS---RSFRRRENKRVKSSK 71
>gb|ESW04178.1| hypothetical protein PHAVU_011G073100g [Phaseolus vulgaris]
Length = 439
Score = 67.0 bits (162), Expect = 2e-09
Identities = 31/56 (55%), Positives = 42/56 (75%)
Frame = -2
Query: 250 DEARFNKAKSLLPPRFTVDHLHDVIVREEDPLVCLELFNWASQRPRFMLNVLSEHL 83
D+A+F A S LPPRFT + L VI +++ PLVCLELF+WASQ+PRF +V + H+
Sbjct: 106 DQAQFQLALSQLPPRFTTEELCSVISQQDHPLVCLELFHWASQQPRFRHDVSTYHV 161
>gb|EOY33083.1| Tetratricopeptide repeat-like superfamily protein, putative
[Theobroma cacao]
Length = 429
Score = 67.0 bits (162), Expect = 2e-09
Identities = 32/56 (57%), Positives = 40/56 (71%)
Frame = -2
Query: 250 DEARFNKAKSLLPPRFTVDHLHDVIVREEDPLVCLELFNWASQRPRFMLNVLSEHL 83
D+ +F KA S L PRFT + L +VI EEDPLVC ELFNWA Q+PRF +V + H+
Sbjct: 107 DQPKFEKAVSQLLPRFTAEELCNVITLEEDPLVCWELFNWAVQQPRFRHDVSTYHI 162
>ref|XP_004167072.1| PREDICTED: pentatricopeptide repeat-containing protein At2g27800,
mitochondrial-like [Cucumis sativus]
Length = 428
Score = 63.9 bits (154), Expect(2) = 4e-09
Identities = 29/47 (61%), Positives = 35/47 (74%)
Frame = -2
Query: 250 DEARFNKAKSLLPPRFTVDHLHDVIVREEDPLVCLELFNWASQRPRF 110
DE +F A S +PPRFT + L +VI + DPLVC ELFNWASQ+PRF
Sbjct: 103 DETQFQLAVSKIPPRFTSEELCNVISLQRDPLVCFELFNWASQQPRF 149
Score = 22.3 bits (46), Expect(2) = 4e-09
Identities = 8/12 (66%), Positives = 11/12 (91%)
Frame = -3
Query: 288 RAYRKRVNKRLR 253
R++RKR NKRL+
Sbjct: 84 RSFRKRANKRLK 95
>ref|XP_004147297.1| PREDICTED: pentatricopeptide repeat-containing protein At2g27800,
mitochondrial-like [Cucumis sativus]
Length = 428
Score = 63.9 bits (154), Expect(2) = 4e-09
Identities = 29/47 (61%), Positives = 35/47 (74%)
Frame = -2
Query: 250 DEARFNKAKSLLPPRFTVDHLHDVIVREEDPLVCLELFNWASQRPRF 110
DE +F A S +PPRFT + L +VI + DPLVC ELFNWASQ+PRF
Sbjct: 103 DETQFQLAVSKIPPRFTSEELCNVISLQRDPLVCFELFNWASQQPRF 149
Score = 22.3 bits (46), Expect(2) = 4e-09
Identities = 8/12 (66%), Positives = 11/12 (91%)
Frame = -3
Query: 288 RAYRKRVNKRLR 253
R++RKR NKRL+
Sbjct: 84 RSFRKRANKRLK 95
>ref|XP_006294242.1| hypothetical protein CARUB_v10023241mg [Capsella rubella]
gi|482562950|gb|EOA27140.1| hypothetical protein
CARUB_v10023241mg [Capsella rubella]
Length = 437
Score = 64.3 bits (155), Expect = 2e-08
Identities = 29/56 (51%), Positives = 37/56 (66%)
Frame = -2
Query: 250 DEARFNKAKSLLPPRFTVDHLHDVIVREEDPLVCLELFNWASQRPRFMLNVLSEHL 83
+E++F + S LPPRFT + L D I EEDP +C LFNWASQ+PRF S H+
Sbjct: 117 NESKFQETISKLPPRFTPEELADAITLEEDPFLCFHLFNWASQQPRFKHENCSYHI 172
>ref|NP_001154742.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana] gi|332006287|gb|AED93670.1| pentatricopeptide
(PPR) repeat-containing protein [Arabidopsis thaliana]
Length = 550
Score = 64.3 bits (155), Expect = 2e-08
Identities = 29/56 (51%), Positives = 37/56 (66%)
Frame = -2
Query: 250 DEARFNKAKSLLPPRFTVDHLHDVIVREEDPLVCLELFNWASQRPRFMLNVLSEHL 83
+E++F + S LPPRFT + L D I EEDP +C LFNWASQ+PRF S H+
Sbjct: 90 NESKFQETISKLPPRFTPEELADAITLEEDPFLCFHLFNWASQQPRFTHENCSYHI 145
>ref|NP_198082.4| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana] gi|332006286|gb|AED93669.1| pentatricopeptide
(PPR) repeat-containing protein [Arabidopsis thaliana]
Length = 575
Score = 64.3 bits (155), Expect = 2e-08
Identities = 29/56 (51%), Positives = 37/56 (66%)
Frame = -2
Query: 250 DEARFNKAKSLLPPRFTVDHLHDVIVREEDPLVCLELFNWASQRPRFMLNVLSEHL 83
+E++F + S LPPRFT + L D I EEDP +C LFNWASQ+PRF S H+
Sbjct: 115 NESKFQETISKLPPRFTPEELADAITLEEDPFLCFHLFNWASQQPRFTHENCSYHI 170
>ref|XP_006409790.1| hypothetical protein EUTSA_v10016739mg [Eutrema salsugineum]
gi|557110959|gb|ESQ51243.1| hypothetical protein
EUTSA_v10016739mg [Eutrema salsugineum]
Length = 407
Score = 63.9 bits (154), Expect = 2e-08
Identities = 28/55 (50%), Positives = 37/55 (67%)
Frame = -2
Query: 250 DEARFNKAKSLLPPRFTVDHLHDVIVREEDPLVCLELFNWASQRPRFMLNVLSEH 86
D+++F + S LPPRFT + L D + +EDPL+C LFNWASQ+PRF S H
Sbjct: 87 DQSKFQETISKLPPRFTPEELSDAMTLQEDPLLCFHLFNWASQQPRFKHENCSYH 141
>ref|XP_003606459.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355507514|gb|AES88656.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 418
Score = 63.9 bits (154), Expect = 2e-08
Identities = 30/56 (53%), Positives = 39/56 (69%)
Frame = -2
Query: 250 DEARFNKAKSLLPPRFTVDHLHDVIVREEDPLVCLELFNWASQRPRFMLNVLSEHL 83
D+ +F A+S L PRFT + L +VI + DPLVCLELF+WAS +PRF N S H+
Sbjct: 80 DQEKFQFAQSQLLPRFTPEELRNVIANQRDPLVCLELFHWASHQPRFRHNESSFHV 135
>ref|XP_006424630.1| hypothetical protein CICLE_v10028524mg [Citrus clementina]
gi|568869886|ref|XP_006488146.1| PREDICTED:
pentatricopeptide repeat-containing protein At2g27800,
mitochondrial-like [Citrus sinensis]
gi|557526564|gb|ESR37870.1| hypothetical protein
CICLE_v10028524mg [Citrus clementina]
Length = 417
Score = 63.5 bits (153), Expect = 3e-08
Identities = 29/56 (51%), Positives = 40/56 (71%)
Frame = -2
Query: 250 DEARFNKAKSLLPPRFTVDHLHDVIVREEDPLVCLELFNWASQRPRFMLNVLSEHL 83
D+ +F A S LPPRF + L +V+ +EDPLVCLELFNWAS++PRF + + H+
Sbjct: 87 DDTQFRCAVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHI 142
>emb|CBI16275.3| unnamed protein product [Vitis vinifera]
Length = 441
Score = 63.5 bits (153), Expect = 3e-08
Identities = 29/56 (51%), Positives = 43/56 (76%)
Frame = -2
Query: 250 DEARFNKAKSLLPPRFTVDHLHDVIVREEDPLVCLELFNWASQRPRFMLNVLSEHL 83
+EA+F++A S L PRF+ L +V+ +EDP+VCLE+FNWASQ+PRF +V + H+
Sbjct: 109 NEAQFHQAISELLPRFSAGELCEVLNLQEDPIVCLEIFNWASQQPRFRHDVSTYHI 164
>ref|XP_002324476.2| hypothetical protein POPTR_0018s10150g [Populus trichocarpa]
gi|550318443|gb|EEF03041.2| hypothetical protein
POPTR_0018s10150g [Populus trichocarpa]
Length = 400
Score = 62.8 bits (151), Expect = 5e-08
Identities = 30/56 (53%), Positives = 40/56 (71%)
Frame = -2
Query: 250 DEARFNKAKSLLPPRFTVDHLHDVIVREEDPLVCLELFNWASQRPRFMLNVLSEHL 83
DEA+F ++ S LP RFT + L + I E+DPLVCLELFNWASQ+ RF + + H+
Sbjct: 69 DEAKFQRSVSQLPSRFTNEELCNNITLEDDPLVCLELFNWASQQHRFRHDASTYHV 124
>ref|NP_180348.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546772|sp|Q9ZUY1.2|PP173_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At2g27800, mitochondrial; Flags: Precursor
gi|330252952|gb|AEC08046.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 442
Score = 62.4 bits (150), Expect = 6e-08
Identities = 28/54 (51%), Positives = 36/54 (66%)
Frame = -2
Query: 244 ARFNKAKSLLPPRFTVDHLHDVIVREEDPLVCLELFNWASQRPRFMLNVLSEHL 83
++F++ S LPPRFT + L D I EEDP +C LFNWASQ+PRF S H+
Sbjct: 124 SKFHETISKLPPRFTPEELADAITLEEDPFLCFHLFNWASQQPRFTHENCSYHI 177
>gb|AAC73020.1| hypothetical protein [Arabidopsis thaliana]
Length = 427
Score = 62.4 bits (150), Expect = 6e-08
Identities = 28/54 (51%), Positives = 36/54 (66%)
Frame = -2
Query: 244 ARFNKAKSLLPPRFTVDHLHDVIVREEDPLVCLELFNWASQRPRFMLNVLSEHL 83
++F++ S LPPRFT + L D I EEDP +C LFNWASQ+PRF S H+
Sbjct: 109 SKFHETISKLPPRFTPEELADAITLEEDPFLCFHLFNWASQQPRFTHENCSYHI 162