BLASTX nr result
ID: Rheum21_contig00027903
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00027903
(282 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN79116.1| hypothetical protein VITISV_002093 [Vitis vinifera] 131 1e-28
emb|CAN72676.1| hypothetical protein VITISV_020406 [Vitis vinifera] 131 1e-28
emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera] 131 1e-28
emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera] 131 1e-28
gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum ... 130 2e-28
emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera] 128 9e-28
gb|EOY04542.1| Uncharacterized protein TCM_019778 [Theobroma cacao] 126 3e-27
gb|ABW74566.1| integrase [Boechera divaricarpa] 123 3e-26
ref|XP_004237696.1| PREDICTED: uncharacterized protein LOC101247... 115 6e-24
ref|XP_006598425.1| PREDICTED: uncharacterized protein LOC100808... 94 1e-17
emb|CAN74283.1| hypothetical protein VITISV_032452 [Vitis vinifera] 93 3e-17
emb|CAN74303.1| hypothetical protein VITISV_032980 [Vitis vinifera] 92 9e-17
emb|CAN71445.1| hypothetical protein VITISV_042489 [Vitis vinifera] 91 2e-16
emb|CAN66871.1| hypothetical protein VITISV_021425 [Vitis vinifera] 90 3e-16
gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi... 90 4e-16
emb|CAN76821.1| hypothetical protein VITISV_017285 [Vitis vinifera] 89 5e-16
gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana] 89 6e-16
gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi... 89 6e-16
emb|CAN63536.1| hypothetical protein VITISV_002860 [Vitis vinifera] 89 6e-16
emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana] 89 6e-16
>emb|CAN79116.1| hypothetical protein VITISV_002093 [Vitis vinifera]
Length = 1109
Score = 131 bits (329), Expect = 1e-28
Identities = 60/94 (63%), Positives = 73/94 (77%)
Frame = +1
Query: 1 FPLTLPARESKVLLVKGEENARVWHLRYGHLNVQGLRLLSAKEMVNGLPKIGELELCEGC 180
FPL + + E L+VK + +WHLRYGHLNV+GL+LLS KEMV GLPKI + +CEGC
Sbjct: 403 FPLEVSSIEKHALVVKETSESNLWHLRYGHLNVKGLKLLSKKEMVFGLPKIDSVNVCEGC 462
Query: 181 IYGKQSKGSFPVGKAWRASDCLELLHADLCGPMQ 282
IYGKQSK FP G++ RAS CLE++HADLCGPMQ
Sbjct: 463 IYGKQSKKPFPKGRSRRASSCLEIIHADLCGPMQ 496
>emb|CAN72676.1| hypothetical protein VITISV_020406 [Vitis vinifera]
Length = 1183
Score = 131 bits (329), Expect = 1e-28
Identities = 60/94 (63%), Positives = 73/94 (77%)
Frame = +1
Query: 1 FPLTLPARESKVLLVKGEENARVWHLRYGHLNVQGLRLLSAKEMVNGLPKIGELELCEGC 180
FPL + + E L+VK + +WHLRYGHLNV+GL+LLS KEMV GLPKI + +CEGC
Sbjct: 351 FPLEVSSIEKHALVVKETSESNLWHLRYGHLNVKGLKLLSKKEMVFGLPKIDSVNVCEGC 410
Query: 181 IYGKQSKGSFPVGKAWRASDCLELLHADLCGPMQ 282
IYGKQSK FP G++ RAS CLE++HADLCGPMQ
Sbjct: 411 IYGKQSKKPFPKGRSRRASSCLEIIHADLCGPMQ 444
>emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera]
Length = 1274
Score = 131 bits (329), Expect = 1e-28
Identities = 60/94 (63%), Positives = 73/94 (77%)
Frame = +1
Query: 1 FPLTLPARESKVLLVKGEENARVWHLRYGHLNVQGLRLLSAKEMVNGLPKIGELELCEGC 180
FPL + + E L+VK + +WHLRYGHLNV+GL+LLS KEMV GLPKI + +CEGC
Sbjct: 417 FPLEVSSIEKHALVVKETSESNLWHLRYGHLNVKGLKLLSKKEMVFGLPKIDSVNVCEGC 476
Query: 181 IYGKQSKGSFPVGKAWRASDCLELLHADLCGPMQ 282
IYGKQSK FP G++ RAS CLE++HADLCGPMQ
Sbjct: 477 IYGKQSKKPFPKGRSRRASSCLEIIHADLCGPMQ 510
>emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera]
Length = 1472
Score = 131 bits (329), Expect = 1e-28
Identities = 60/94 (63%), Positives = 73/94 (77%)
Frame = +1
Query: 1 FPLTLPARESKVLLVKGEENARVWHLRYGHLNVQGLRLLSAKEMVNGLPKIGELELCEGC 180
FPL + + E L+VK + +WHLRYGHLNV+GL+LLS KEMV GLPKI + +CEGC
Sbjct: 402 FPLEVSSIEKHALVVKETSESNLWHLRYGHLNVKGLKLLSKKEMVFGLPKIDSVNVCEGC 461
Query: 181 IYGKQSKGSFPVGKAWRASDCLELLHADLCGPMQ 282
IYGKQSK FP G++ RAS CLE++HADLCGPMQ
Sbjct: 462 IYGKQSKKPFPKGRSRRASSCLEIIHADLCGPMQ 495
>gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum demissum]
Length = 1333
Score = 130 bits (327), Expect = 2e-28
Identities = 59/94 (62%), Positives = 73/94 (77%)
Frame = +1
Query: 1 FPLTLPARESKVLLVKGEENARVWHLRYGHLNVQGLRLLSAKEMVNGLPKIGELELCEGC 180
FPL + + L+VK + +WHLRYGHLNV L+LL K+MV GLP I EL+LCEGC
Sbjct: 422 FPLDISNVGNSALVVKEKNETNLWHLRYGHLNVNWLKLLVQKDMVIGLPNIKELDLCEGC 481
Query: 181 IYGKQSKGSFPVGKAWRASDCLELLHADLCGPMQ 282
IYGKQ++ SFPVGK+WRA+ CLEL+HADLCGPM+
Sbjct: 482 IYGKQTRKSFPVGKSWRATTCLELVHADLCGPMK 515
>emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera]
Length = 1430
Score = 128 bits (321), Expect = 9e-28
Identities = 59/94 (62%), Positives = 72/94 (76%)
Frame = +1
Query: 1 FPLTLPARESKVLLVKGEENARVWHLRYGHLNVQGLRLLSAKEMVNGLPKIGELELCEGC 180
FPL + + E L+VK + +WHLRYGHLNV+GL+LLS KEMV LPKI + +CEGC
Sbjct: 528 FPLEVSSIEKHALVVKETSESNLWHLRYGHLNVKGLKLLSKKEMVFELPKIDSVNVCEGC 587
Query: 181 IYGKQSKGSFPVGKAWRASDCLELLHADLCGPMQ 282
IYGKQSK FP G++ RAS CLE++HADLCGPMQ
Sbjct: 588 IYGKQSKKPFPKGRSRRASSCLEIIHADLCGPMQ 621
>gb|EOY04542.1| Uncharacterized protein TCM_019778 [Theobroma cacao]
Length = 704
Score = 126 bits (317), Expect = 3e-27
Identities = 58/93 (62%), Positives = 69/93 (74%)
Frame = +1
Query: 1 FPLTLPARESKVLLVKGEENARVWHLRYGHLNVQGLRLLSAKEMVNGLPKIGELELCEGC 180
FPL + E+ ++ G+ AR+ HL YGHLN+ GL+LLS KEMV GLPK+ L CEGC
Sbjct: 385 FPLEVSMIENYAMVANGDSEARLSHLHYGHLNINGLKLLSQKEMVFGLPKLENLGFCEGC 444
Query: 181 IYGKQSKGSFPVGKAWRASDCLELLHADLCGPM 279
+YGKQSK F VGKAWR S CLEL+HADLCGPM
Sbjct: 445 VYGKQSKKPFLVGKAWRVSKCLELVHADLCGPM 477
>gb|ABW74566.1| integrase [Boechera divaricarpa]
Length = 1165
Score = 123 bits (308), Expect = 3e-26
Identities = 56/94 (59%), Positives = 76/94 (80%)
Frame = +1
Query: 1 FPLTLPARESKVLLVKGEENARVWHLRYGHLNVQGLRLLSAKEMVNGLPKIGELELCEGC 180
+PL + + E+K L+ K + +++ HLRYGHL+ GLR+L+ K+MV GLPKIG L+LCEGC
Sbjct: 258 YPLEMSSVETKALVAKVSDISKLLHLRYGHLHENGLRVLNQKDMVIGLPKIGALKLCEGC 317
Query: 181 IYGKQSKGSFPVGKAWRASDCLELLHADLCGPMQ 282
+YGKQS+ SFPVG+A RA+ LE++HADLCGPMQ
Sbjct: 318 VYGKQSRRSFPVGRARRATQYLEIVHADLCGPMQ 351
>ref|XP_004237696.1| PREDICTED: uncharacterized protein LOC101247717 [Solanum
lycopersicum]
Length = 527
Score = 115 bits (288), Expect = 6e-24
Identities = 53/87 (60%), Positives = 64/87 (73%)
Frame = +1
Query: 1 FPLTLPARESKVLLVKGEENARVWHLRYGHLNVQGLRLLSAKEMVNGLPKIGELELCEGC 180
FPL + E V++ G++ R+WHL YGHLNV GL+LLS KEMV GLPK+ L+ CE C
Sbjct: 125 FPLQVSIVEKCVMVASGDDETRLWHLHYGHLNVNGLKLLSQKEMVFGLPKVENLDFCESC 184
Query: 181 IYGKQSKGSFPVGKAWRASDCLELLHA 261
+YGKQSK FPVGK+WRAS CLE L A
Sbjct: 185 VYGKQSKKVFPVGKSWRASVCLEELTA 211
>ref|XP_006598425.1| PREDICTED: uncharacterized protein LOC100808159 [Glycine max]
Length = 1550
Score = 94.4 bits (233), Expect = 1e-17
Identities = 41/77 (53%), Positives = 54/77 (70%), Gaps = 1/77 (1%)
Frame = +1
Query: 52 EENARVWHLRYGHLNVQGLRLLSAKEMVNGLPKIG-ELELCEGCIYGKQSKGSFPVGKAW 228
E+ + +WH RYGHLN GL+ L K MV LP+I ++CE C+ GKQ + FP GK+W
Sbjct: 1101 EDPSWLWHFRYGHLNFSGLKTLQQKNMVTCLPQINIPSQVCEECVVGKQHRSQFPKGKSW 1160
Query: 229 RASDCLELLHADLCGPM 279
RA D LEL+H+D+CGPM
Sbjct: 1161 RAKDVLELVHSDICGPM 1177
>emb|CAN74283.1| hypothetical protein VITISV_032452 [Vitis vinifera]
Length = 1338
Score = 93.2 bits (230), Expect = 3e-17
Identities = 40/77 (51%), Positives = 54/77 (70%), Gaps = 1/77 (1%)
Frame = +1
Query: 52 EENARVWHLRYGHLNVQGLRLLSAKEMVNGLPKI-GELELCEGCIYGKQSKGSFPVGKAW 228
E+ AR+WHLRYGHL+ L+ L K +VNGLP+ L++CE C+ GKQ + FP W
Sbjct: 460 EDQARLWHLRYGHLSFNXLKTLQQKRLVNGLPQFQAPLKVCEDCLVGKQRRNPFPKESTW 519
Query: 229 RASDCLELLHADLCGPM 279
RAS L+L+HAD+CGP+
Sbjct: 520 RASQILQLVHADICGPI 536
>emb|CAN74303.1| hypothetical protein VITISV_032980 [Vitis vinifera]
Length = 1283
Score = 91.7 bits (226), Expect = 9e-17
Identities = 43/94 (45%), Positives = 56/94 (59%), Gaps = 1/94 (1%)
Frame = +1
Query: 1 FPLTLPARESKVLLVKGEENARVWHLRYGHLNVQGLRLLSAKEMVNGLPKIGE-LELCEG 177
FPL L K + +WH RYGHLN GL+ L K MV GLP I ++CE
Sbjct: 403 FPLYLDNTTQNCFSTKLMDEGWLWHFRYGHLNFGGLKTLQQKNMVTGLPPIXTPSQICEE 462
Query: 178 CIYGKQSKGSFPVGKAWRASDCLELLHADLCGPM 279
C+ GKQ + FP GK+WR + LEL+H+D+CGP+
Sbjct: 463 CVVGKQHRYQFPKGKSWRXNKVLELVHSDICGPI 496
>emb|CAN71445.1| hypothetical protein VITISV_042489 [Vitis vinifera]
Length = 1246
Score = 90.9 bits (224), Expect = 2e-16
Identities = 43/94 (45%), Positives = 56/94 (59%), Gaps = 1/94 (1%)
Frame = +1
Query: 1 FPLTLPARESKVLLVKGEENARVWHLRYGHLNVQGLRLLSAKEMVNGLPKIGEL-ELCEG 177
FPL L VK + +WH RYGHLN L+ L K MV GLP I ++CE
Sbjct: 403 FPLYLDNTTQNCFSVKLMDEGWLWHFRYGHLNFXXLKTLQXKNMVTGLPXIQTXSQICEE 462
Query: 178 CIYGKQSKGSFPVGKAWRASDCLELLHADLCGPM 279
C+ GKQ + FP GK+WR + LEL+H+D+CGP+
Sbjct: 463 CVXGKQHRYQFPKGKSWRXNKVLELVHSDICGPI 496
>emb|CAN66871.1| hypothetical protein VITISV_021425 [Vitis vinifera]
Length = 338
Score = 90.1 bits (222), Expect = 3e-16
Identities = 43/95 (45%), Positives = 58/95 (61%), Gaps = 2/95 (2%)
Frame = +1
Query: 1 FPLTLPARESKVLLVKGEENARVWHLRYGHLNVQGLRLLSAKEMVNGLPKIGEL--ELCE 174
FP+ E+ L ++ E A +WH R+GHLN L++L ++MV GLP E E+C+
Sbjct: 165 FPIVFKYAENVALRMEDVEEAWLWHRRFGHLNFNSLKMLYQRKMVQGLPNTIEEKNEVCD 224
Query: 175 GCIYGKQSKGSFPVGKAWRASDCLELLHADLCGPM 279
GC GK + SF G AWRA LEL+H D+CGPM
Sbjct: 225 GCALGKHHRQSFLKGVAWRAKKVLELIHTDICGPM 259
>gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana]
Length = 1352
Score = 89.7 bits (221), Expect = 4e-16
Identities = 43/78 (55%), Positives = 55/78 (70%), Gaps = 1/78 (1%)
Frame = +1
Query: 52 EENARVWHLRYGHLNVQGLRLLSAKEMVNGLPKIGEL-ELCEGCIYGKQSKGSFPVGKAW 228
+E + +WHLR+GHLN GL LLS KEMV GLP I ++CEGC+ GKQ K SFP +
Sbjct: 462 KEESWLWHLRFGHLNFGGLELLSRKEMVRGLPCINHPNQVCEGCLLGKQFKMSFPKESSS 521
Query: 229 RASDCLELLHADLCGPMQ 282
RA LEL+H D+CGP++
Sbjct: 522 RAQKSLELIHTDVCGPIK 539
>emb|CAN76821.1| hypothetical protein VITISV_017285 [Vitis vinifera]
Length = 672
Score = 89.4 bits (220), Expect = 5e-16
Identities = 43/92 (46%), Positives = 63/92 (68%), Gaps = 1/92 (1%)
Frame = +1
Query: 1 FPLTLPARESKVLLVKGEENARVWHLRYGHLNVQGLRLLSAKEMVNGLPKIG-ELELCEG 177
FPL + + +S L+ + ++ + +WHLRYGHLN GL+ L K MV GLP+I ++CE
Sbjct: 296 FPLKIDSVQS-FLMAEVKDLSWLWHLRYGHLNFGGLKTLQQKHMVTGLPQISIPSQVCEE 354
Query: 178 CIYGKQSKGSFPVGKAWRASDCLELLHADLCG 273
C+ GKQ + FP GK+ RA + LEL+H+D+CG
Sbjct: 355 CVVGKQHRSQFPQGKSRRAKNVLELVHSDICG 386
>gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana]
Length = 1291
Score = 89.0 bits (219), Expect = 6e-16
Identities = 43/78 (55%), Positives = 55/78 (70%), Gaps = 1/78 (1%)
Frame = +1
Query: 52 EENARVWHLRYGHLNVQGLRLLSAKEMVNGLPKIGEL-ELCEGCIYGKQSKGSFPVGKAW 228
+E + +WHLR+GHLN GL LLS KEMV GLP I ++CEGC+ GKQ K SFP +
Sbjct: 424 KEESWLWHLRFGHLNFGGLELLSRKEMVRGLPCINHPNQVCEGCLLGKQFKMSFPKESSS 483
Query: 229 RASDCLELLHADLCGPMQ 282
RA LEL+H D+CGP++
Sbjct: 484 RAQKPLELIHTDVCGPIK 501
>gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana]
gi|12321387|gb|AAG50765.1|AC079131_10 copia-type
polyprotein, putative [Arabidopsis thaliana]
Length = 1320
Score = 89.0 bits (219), Expect = 6e-16
Identities = 43/78 (55%), Positives = 55/78 (70%), Gaps = 1/78 (1%)
Frame = +1
Query: 52 EENARVWHLRYGHLNVQGLRLLSAKEMVNGLPKIGEL-ELCEGCIYGKQSKGSFPVGKAW 228
+E + +WHLR+GHLN GL LLS KEMV GLP I ++CEGC+ GKQ K SFP +
Sbjct: 462 KEESWLWHLRFGHLNFGGLELLSRKEMVRGLPCINHPNQVCEGCLLGKQFKMSFPKESSS 521
Query: 229 RASDCLELLHADLCGPMQ 282
RA LEL+H D+CGP++
Sbjct: 522 RAQKPLELIHTDVCGPIK 539
>emb|CAN63536.1| hypothetical protein VITISV_002860 [Vitis vinifera]
Length = 1041
Score = 89.0 bits (219), Expect = 6e-16
Identities = 44/94 (46%), Positives = 55/94 (58%), Gaps = 1/94 (1%)
Frame = +1
Query: 1 FPLTLPARESKVLLVKGEENARVWHLRYGHLNVQGLRLLSAKEMVNGLPKI-GELELCEG 177
FPL L L K + A +WH RYGHLN GL+ L K MV GLP+I + CE
Sbjct: 217 FPLYLHNTIHLCFLAKLKYEAWLWHFRYGHLNFGGLKTLQQKNMVTGLPQIIASSQFCEE 276
Query: 178 CIYGKQSKGSFPVGKAWRASDCLELLHADLCGPM 279
C+ KQ FP K+WRA LEL+H+D+CGP+
Sbjct: 277 CVVSKQHCNQFPQVKSWRAKKALELVHSDICGPI 310
>emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]
Length = 1352
Score = 89.0 bits (219), Expect = 6e-16
Identities = 43/78 (55%), Positives = 55/78 (70%), Gaps = 1/78 (1%)
Frame = +1
Query: 52 EENARVWHLRYGHLNVQGLRLLSAKEMVNGLPKIGEL-ELCEGCIYGKQSKGSFPVGKAW 228
+E + +WHLR+GHLN GL LLS KEMV GLP I ++CEGC+ GKQ K SFP +
Sbjct: 462 KEESWLWHLRFGHLNFGGLELLSRKEMVRGLPCINHPNQVCEGCLLGKQFKMSFPKESSS 521
Query: 229 RASDCLELLHADLCGPMQ 282
RA LEL+H D+CGP++
Sbjct: 522 RAQKPLELIHTDVCGPIK 539