BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00027549
         (482 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMJ02588.1| hypothetical protein PRUPE_ppa012196mg [Prunus pe...   113   3e-27
gb|ESW16400.1| hypothetical protein PHAVU_007G153500g [Phaseolus...   112   2e-25
gb|EOX94312.1| Photosystem II reaction center PSB28 protein isof...   115   3e-25
ref|XP_004289996.1| PREDICTED: photosystem II reaction center PS...   110   1e-24
ref|NP_001235805.1| uncharacterized protein LOC100306491 [Glycin...   110   2e-24
ref|XP_004495056.1| PREDICTED: photosystem II reaction center PS...   115   6e-24
gb|EXB46026.1| Photosystem II reaction center PSB28 protein [Mor...   110   7e-24
ref|XP_002303109.2| hypothetical protein POPTR_0002s25810g [Popu...   109   9e-24
gb|ABK95843.1| unknown [Populus trichocarpa]                          109   9e-24
gb|AFK35252.1| unknown [Medicago truncatula]                          114   1e-23
ref|XP_002526538.1| Photosystem II reaction center W protein, pu...   107   4e-23
ref|XP_004157580.1| PREDICTED: photosystem II reaction center PS...   112   5e-23
ref|XP_004140578.1| PREDICTED: photosystem II reaction center PS...   112   5e-23
ref|XP_006355890.1| PREDICTED: photosystem II reaction center PS...   110   1e-22
ref|XP_004247130.1| PREDICTED: photosystem II reaction center PS...   110   1e-22
ref|XP_002271666.1| PREDICTED: photosystem II reaction center PS...   110   1e-22
ref|XP_003537110.1| PREDICTED: photosystem II reaction center PS...   110   2e-22
ref|XP_004971207.1| PREDICTED: photosystem II reaction center PS...   108   3e-22
tpg|DAA55911.1| TPA: hypothetical protein ZEAMMB73_880653 [Zea m...   109   4e-22
gb|AFK33586.1| unknown [Lotus japonicus]                              109   4e-22

>gb|EMJ02588.1| hypothetical protein PRUPE_ppa012196mg [Prunus persica]
          Length = 180

 Score =  113 bits (282), Expect(2) = 3e-27
 Identities = 53/62 (85%), Positives = 58/62 (93%)
 Frame = -2

Query: 235 ELTVPDVRLTKSRDGTNGTAIFRFEQPSMFDSSGELGDITGFYMIDEESVIQSVDVNAKF 56
           E T+PDVRLTKS+DGTNG AIF+FEQPS+FDSSGE GDITGFYMIDEE V+QSVDVNAKF
Sbjct: 80  EQTIPDVRLTKSKDGTNGVAIFKFEQPSVFDSSGEFGDITGFYMIDEEGVLQSVDVNAKF 139

Query: 55  VN 50
           VN
Sbjct: 140 VN 141



 Score = 34.3 bits (77), Expect(2) = 3e-27
 Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
 Frame = -1

Query: 434 MATLQSFTWASPIS---KQHSLHSGIFPRAAIQCLPSSLNGQQL 312
           MATLQS  ++SP+S   +Q  LHSG+      +   S+ NGQ L
Sbjct: 1   MATLQSLAFSSPVSHCLQQPRLHSGLLSWTVHRSAKSTFNGQSL 44


>gb|ESW16400.1| hypothetical protein PHAVU_007G153500g [Phaseolus vulgaris]
          Length = 179

 Score =  112 bits (280), Expect(2) = 2e-25
 Identities = 53/62 (85%), Positives = 58/62 (93%)
 Frame = -2

Query: 235 ELTVPDVRLTKSRDGTNGTAIFRFEQPSMFDSSGELGDITGFYMIDEESVIQSVDVNAKF 56
           E T+PDVRLTKSRDGTNG AIF F+QPS+FDSSGE+GDITGFYMIDEE V+QSVDVNAKF
Sbjct: 79  EQTIPDVRLTKSRDGTNGMAIFTFDQPSVFDSSGEIGDITGFYMIDEEGVLQSVDVNAKF 138

Query: 55  VN 50
           VN
Sbjct: 139 VN 140



 Score = 29.3 bits (64), Expect(2) = 2e-25
 Identities = 20/48 (41%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
 Frame = -1

Query: 434 MATLQSFTWASPISKQ-HSLHSGIFPRAAI-QCLPSSLNGQQLSL*CL 297
           MATL S   +SP S   H   S   P + + Q + SS NGQ L + CL
Sbjct: 1   MATLHSLALSSPFSNSLHKPPSYSVPSSIVHQSINSSFNGQTLRMSCL 48


>gb|EOX94312.1| Photosystem II reaction center PSB28 protein isoform 1 [Theobroma
           cacao] gi|508702417|gb|EOX94313.1| Photosystem II
           reaction center PSB28 protein isoform 1 [Theobroma
           cacao]
          Length = 181

 Score =  115 bits (289), Expect(2) = 3e-25
 Identities = 55/62 (88%), Positives = 59/62 (95%)
 Frame = -2

Query: 235 ELTVPDVRLTKSRDGTNGTAIFRFEQPSMFDSSGELGDITGFYMIDEESVIQSVDVNAKF 56
           E T+PDVRLTKSRDGTNG AIFRFEQPS+FDSSGE+GDITGFYMIDEE V+QSVDVNAKF
Sbjct: 81  EQTIPDVRLTKSRDGTNGVAIFRFEQPSVFDSSGEVGDITGFYMIDEEGVLQSVDVNAKF 140

Query: 55  VN 50
           VN
Sbjct: 141 VN 142



 Score = 25.0 bits (53), Expect(2) = 3e-25
 Identities = 19/47 (40%), Positives = 22/47 (46%), Gaps = 4/47 (8%)
 Frame = -1

Query: 434 MATLQSFTWASPIS----KQHSLHSGIFPRAAIQCLPSSLNGQQLSL 306
           MATL S  +ASP+S     Q    SGI      +   S  NGQ L L
Sbjct: 1   MATLHSLAFASPVSHTLLNQPRSLSGIPSWIVHRSANSLFNGQSLQL 47


>ref|XP_004289996.1| PREDICTED: photosystem II reaction center PSB28 protein,
           chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 181

 Score =  110 bits (275), Expect(2) = 1e-24
 Identities = 52/62 (83%), Positives = 56/62 (90%)
 Frame = -2

Query: 235 ELTVPDVRLTKSRDGTNGTAIFRFEQPSMFDSSGELGDITGFYMIDEESVIQSVDVNAKF 56
           E T+PDVRLTKS+DGTNG A FRFEQPS+FDSSGE GDITGFYMIDEE V+ SVDVNAKF
Sbjct: 81  EQTIPDVRLTKSKDGTNGVATFRFEQPSVFDSSGEFGDITGFYMIDEEGVLSSVDVNAKF 140

Query: 55  VN 50
           VN
Sbjct: 141 VN 142



 Score = 28.1 bits (61), Expect(2) = 1e-24
 Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 4/47 (8%)
 Frame = -1

Query: 434 MATLQS-FTWASPIS---KQHSLHSGIFPRAAIQCLPSSLNGQQLSL 306
           MATLQS   ++SP S   +Q   HSG+   A  +   S+ NGQ L +
Sbjct: 1   MATLQSSLAFSSPASHCLQQSRSHSGLLSWAVHRSAESTFNGQSLRI 47


>ref|NP_001235805.1| uncharacterized protein LOC100306491 [Glycine max]
           gi|255628701|gb|ACU14695.1| unknown [Glycine max]
          Length = 179

 Score =  110 bits (275), Expect(2) = 2e-24
 Identities = 52/62 (83%), Positives = 58/62 (93%)
 Frame = -2

Query: 235 ELTVPDVRLTKSRDGTNGTAIFRFEQPSMFDSSGELGDITGFYMIDEESVIQSVDVNAKF 56
           E T+PDVRLTKSRDGTNG AIF F+QPS+FDSSGE+GDITGFYMIDEE V+QSVDV+AKF
Sbjct: 79  EQTIPDVRLTKSRDGTNGMAIFTFDQPSVFDSSGEIGDITGFYMIDEEGVLQSVDVSAKF 138

Query: 55  VN 50
           VN
Sbjct: 139 VN 140



 Score = 27.7 bits (60), Expect(2) = 2e-24
 Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
 Frame = -1

Query: 434 MATLQSFTWASPISKQ-HSLHSGIFPRAAI-QCLPSSLNGQQLSL*CL 297
           MATL S   +SP+S       S   P + + Q   SS NGQ L L CL
Sbjct: 1   MATLHSLALSSPLSNSLQKPRSCAVPSSIVHQSTNSSFNGQTLHLPCL 48


>ref|XP_004495056.1| PREDICTED: photosystem II reaction center PSB28 protein,
           chloroplastic-like [Cicer arietinum]
          Length = 180

 Score =  115 bits (288), Expect = 6e-24
 Identities = 54/62 (87%), Positives = 60/62 (96%)
 Frame = -2

Query: 235 ELTVPDVRLTKSRDGTNGTAIFRFEQPSMFDSSGELGDITGFYMIDEESVIQSVDVNAKF 56
           ELT+PDV+LTKSRDGTNG AIFRF+QPS+FDSSGE+GDITGFYMIDEE V+QSVDVNAKF
Sbjct: 80  ELTIPDVKLTKSRDGTNGMAIFRFDQPSVFDSSGEVGDITGFYMIDEEGVLQSVDVNAKF 139

Query: 55  VN 50
           VN
Sbjct: 140 VN 141


>gb|EXB46026.1| Photosystem II reaction center PSB28 protein [Morus notabilis]
          Length = 180

 Score =  110 bits (275), Expect(2) = 7e-24
 Identities = 51/62 (82%), Positives = 59/62 (95%)
 Frame = -2

Query: 235 ELTVPDVRLTKSRDGTNGTAIFRFEQPSMFDSSGELGDITGFYMIDEESVIQSVDVNAKF 56
           E T+PDVRLT+SRDGTNG AIF+F+QPS+FDSSGE+GDITGFYMID+E V+QSVDVNAKF
Sbjct: 80  EQTIPDVRLTQSRDGTNGMAIFKFDQPSVFDSSGEVGDITGFYMIDDEGVLQSVDVNAKF 139

Query: 55  VN 50
           VN
Sbjct: 140 VN 141



 Score = 25.8 bits (55), Expect(2) = 7e-24
 Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 5/48 (10%)
 Frame = -1

Query: 434 MATLQSFTWASPISKQHSLH-----SGIFPRAAIQCLPSSLNGQQLSL 306
           MATLQS  ++SP+S  H LH     SG           S+ NGQ L L
Sbjct: 1   MATLQSLAFSSPLS--HHLHQPRSFSGKVSLTIRGSSHSTFNGQCLQL 46


>ref|XP_002303109.2| hypothetical protein POPTR_0002s25810g [Populus trichocarpa]
           gi|550345820|gb|EEE82382.2| hypothetical protein
           POPTR_0002s25810g [Populus trichocarpa]
          Length = 181

 Score =  109 bits (273), Expect(2) = 9e-24
 Identities = 52/62 (83%), Positives = 57/62 (91%)
 Frame = -2

Query: 235 ELTVPDVRLTKSRDGTNGTAIFRFEQPSMFDSSGELGDITGFYMIDEESVIQSVDVNAKF 56
           E TVPDVRLTKSRDGTNG AIF F+QPS+FDSS E+GDITGFYMIDEE ++QSVDVNAKF
Sbjct: 81  EQTVPDVRLTKSRDGTNGMAIFTFDQPSVFDSSAEVGDITGFYMIDEEGILQSVDVNAKF 140

Query: 55  VN 50
           VN
Sbjct: 141 VN 142



 Score = 26.2 bits (56), Expect(2) = 9e-24
 Identities = 21/48 (43%), Positives = 24/48 (50%), Gaps = 5/48 (10%)
 Frame = -1

Query: 434 MATLQSFTWASPISKQHSLH-----SGIFPRAAIQCLPSSLNGQQLSL 306
           MATLQS   ASP++ QH  H     SG    A  +   S  NGQ L L
Sbjct: 1   MATLQSLALASPVA-QHLQHQTRSFSGSGSWAVNKSSYSLFNGQSLCL 47


>gb|ABK95843.1| unknown [Populus trichocarpa]
          Length = 181

 Score =  109 bits (273), Expect(2) = 9e-24
 Identities = 52/62 (83%), Positives = 57/62 (91%)
 Frame = -2

Query: 235 ELTVPDVRLTKSRDGTNGTAIFRFEQPSMFDSSGELGDITGFYMIDEESVIQSVDVNAKF 56
           E TVPDVRLTKSRDGTNG AIF F+QPS+FDSS E+GDITGFYMIDEE ++QSVDVNAKF
Sbjct: 81  EQTVPDVRLTKSRDGTNGMAIFTFDQPSVFDSSAEVGDITGFYMIDEEGILQSVDVNAKF 140

Query: 55  VN 50
           VN
Sbjct: 141 VN 142



 Score = 26.2 bits (56), Expect(2) = 9e-24
 Identities = 21/48 (43%), Positives = 24/48 (50%), Gaps = 5/48 (10%)
 Frame = -1

Query: 434 MATLQSFTWASPISKQHSLH-----SGIFPRAAIQCLPSSLNGQQLSL 306
           MATLQS   ASP++ QH  H     SG    A  +   S  NGQ L L
Sbjct: 1   MATLQSLALASPVA-QHLQHQTRSFSGSGSWAVNKSSYSLFNGQSLCL 47


>gb|AFK35252.1| unknown [Medicago truncatula]
          Length = 182

 Score =  114 bits (285), Expect = 1e-23
 Identities = 53/62 (85%), Positives = 60/62 (96%)
 Frame = -2

Query: 235 ELTVPDVRLTKSRDGTNGTAIFRFEQPSMFDSSGELGDITGFYMIDEESVIQSVDVNAKF 56
           ELT+PDV+LTKS+DGTNG AIFRF+QPS+FDSSGE+GDITGFYMIDEE V+QSVDVNAKF
Sbjct: 82  ELTIPDVKLTKSKDGTNGMAIFRFDQPSVFDSSGEVGDITGFYMIDEEGVLQSVDVNAKF 141

Query: 55  VN 50
           VN
Sbjct: 142 VN 143


>ref|XP_002526538.1| Photosystem II reaction center W protein, putative [Ricinus
           communis] gi|223534099|gb|EEF35816.1| Photosystem II
           reaction center W protein, putative [Ricinus communis]
          Length = 178

 Score =  107 bits (268), Expect(2) = 4e-23
 Identities = 51/62 (82%), Positives = 57/62 (91%)
 Frame = -2

Query: 235 ELTVPDVRLTKSRDGTNGTAIFRFEQPSMFDSSGELGDITGFYMIDEESVIQSVDVNAKF 56
           E T+PDVRLTKSRDGTNG AIF F++PS+FDSS ELGDITGFYMIDEE V+QSVDV+AKF
Sbjct: 78  EQTIPDVRLTKSRDGTNGMAIFTFDEPSVFDSSAELGDITGFYMIDEEGVLQSVDVSAKF 137

Query: 55  VN 50
           VN
Sbjct: 138 VN 139



 Score = 25.8 bits (55), Expect(2) = 4e-23
 Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
 Frame = -1

Query: 434 MATLQSFTWASPISK-QHSLHS--GIFPRAAIQCLPSSLNGQQLSL 306
           MATLQS  +ASP+S   H   S  G F  A  +   S  +G+ L L
Sbjct: 1   MATLQSLAFASPVSHYSHQTRSFPGSFCWAVHRIARSPFSGKSLRL 46


>ref|XP_004157580.1| PREDICTED: photosystem II reaction center PSB28 protein,
           chloroplastic-like [Cucumis sativus]
          Length = 226

 Score =  112 bits (280), Expect = 5e-23
 Identities = 53/62 (85%), Positives = 58/62 (93%)
 Frame = -2

Query: 235 ELTVPDVRLTKSRDGTNGTAIFRFEQPSMFDSSGELGDITGFYMIDEESVIQSVDVNAKF 56
           E T+PDVRLTKSRDGTNG AIFRFEQPS+FDSS E+GDITGFYMIDEE +IQSVDVNAKF
Sbjct: 126 EQTIPDVRLTKSRDGTNGMAIFRFEQPSVFDSSAEVGDITGFYMIDEEGMIQSVDVNAKF 185

Query: 55  VN 50
           +N
Sbjct: 186 IN 187


>ref|XP_004140578.1| PREDICTED: photosystem II reaction center PSB28 protein,
           chloroplastic-like [Cucumis sativus]
          Length = 221

 Score =  112 bits (280), Expect = 5e-23
 Identities = 53/62 (85%), Positives = 58/62 (93%)
 Frame = -2

Query: 235 ELTVPDVRLTKSRDGTNGTAIFRFEQPSMFDSSGELGDITGFYMIDEESVIQSVDVNAKF 56
           E T+PDVRLTKSRDGTNG AIFRFEQPS+FDSS E+GDITGFYMIDEE +IQSVDVNAKF
Sbjct: 121 EQTIPDVRLTKSRDGTNGMAIFRFEQPSVFDSSAEVGDITGFYMIDEEGMIQSVDVNAKF 180

Query: 55  VN 50
           +N
Sbjct: 181 IN 182


>ref|XP_006355890.1| PREDICTED: photosystem II reaction center PSB28 protein,
           chloroplastic-like [Solanum tuberosum]
          Length = 180

 Score =  110 bits (276), Expect = 1e-22
 Identities = 52/62 (83%), Positives = 58/62 (93%)
 Frame = -2

Query: 235 ELTVPDVRLTKSRDGTNGTAIFRFEQPSMFDSSGELGDITGFYMIDEESVIQSVDVNAKF 56
           E T+PDV+LTKSRDGTNG AIFRF+QPS+FDSSGE+GDITGFYMIDEE V+ SVDVNAKF
Sbjct: 80  EQTIPDVKLTKSRDGTNGMAIFRFDQPSVFDSSGEVGDITGFYMIDEEGVLTSVDVNAKF 139

Query: 55  VN 50
           VN
Sbjct: 140 VN 141


>ref|XP_004247130.1| PREDICTED: photosystem II reaction center PSB28 protein,
           chloroplastic-like [Solanum lycopersicum]
          Length = 180

 Score =  110 bits (276), Expect = 1e-22
 Identities = 52/62 (83%), Positives = 58/62 (93%)
 Frame = -2

Query: 235 ELTVPDVRLTKSRDGTNGTAIFRFEQPSMFDSSGELGDITGFYMIDEESVIQSVDVNAKF 56
           E T+PDV+LTKSRDGTNG AIFRF+QPS+FDSSGE+GDITGFYMIDEE V+ SVDVNAKF
Sbjct: 80  EQTIPDVKLTKSRDGTNGMAIFRFDQPSVFDSSGEVGDITGFYMIDEEGVLTSVDVNAKF 139

Query: 55  VN 50
           VN
Sbjct: 140 VN 141


>ref|XP_002271666.1| PREDICTED: photosystem II reaction center PSB28 protein,
           chloroplastic [Vitis vinifera]
           gi|297744226|emb|CBI37196.3| unnamed protein product
           [Vitis vinifera]
          Length = 179

 Score =  110 bits (276), Expect = 1e-22
 Identities = 52/62 (83%), Positives = 59/62 (95%)
 Frame = -2

Query: 235 ELTVPDVRLTKSRDGTNGTAIFRFEQPSMFDSSGELGDITGFYMIDEESVIQSVDVNAKF 56
           E TVPDVRLT+SRDGTNG AIF+FEQPS+FDSSGE+GDITGFYMIDEE V+QSVDV+AKF
Sbjct: 79  EQTVPDVRLTQSRDGTNGMAIFKFEQPSVFDSSGEVGDITGFYMIDEEGVLQSVDVSAKF 138

Query: 55  VN 50
           +N
Sbjct: 139 IN 140


>ref|XP_003537110.1| PREDICTED: photosystem II reaction center PSB28 protein,
           chloroplastic-like [Glycine max]
          Length = 179

 Score =  110 bits (275), Expect = 2e-22
 Identities = 52/62 (83%), Positives = 58/62 (93%)
 Frame = -2

Query: 235 ELTVPDVRLTKSRDGTNGTAIFRFEQPSMFDSSGELGDITGFYMIDEESVIQSVDVNAKF 56
           E T+PDVRLTKSRDGTNG AIF F+QPS+FDSSGE+GDITGFYMIDEE V+QSVDV+AKF
Sbjct: 79  EQTIPDVRLTKSRDGTNGMAIFTFDQPSVFDSSGEIGDITGFYMIDEEGVLQSVDVSAKF 138

Query: 55  VN 50
           VN
Sbjct: 139 VN 140


>ref|XP_004971207.1| PREDICTED: photosystem II reaction center PSB28 protein,
           chloroplastic-like [Setaria italica]
          Length = 238

 Score =  108 bits (271), Expect(2) = 3e-22
 Identities = 52/62 (83%), Positives = 56/62 (90%)
 Frame = -2

Query: 235 ELTVPDVRLTKSRDGTNGTAIFRFEQPSMFDSSGELGDITGFYMIDEESVIQSVDVNAKF 56
           E T+PDVRLTKSRDGTNG AIF FEQPS+FDSS ELGDITGFYMIDEE  +QSVDV+AKF
Sbjct: 138 EQTIPDVRLTKSRDGTNGVAIFTFEQPSVFDSSAELGDITGFYMIDEEGTLQSVDVSAKF 197

Query: 55  VN 50
           VN
Sbjct: 198 VN 199



 Score = 21.6 bits (44), Expect(2) = 3e-22
 Identities = 12/40 (30%), Positives = 19/40 (47%)
 Frame = -1

Query: 431 ATLQSFTWASPISKQHSLHSGIFPRAAIQCLPSSLNGQQL 312
           A +++   ASP+S +      +    + Q L SS NG  L
Sbjct: 63  AVMKALAVASPVSARAQPRRCVAGTPSHQSLQSSFNGMSL 102


>tpg|DAA55911.1| TPA: hypothetical protein ZEAMMB73_880653 [Zea mays]
           gi|414878783|tpg|DAA55914.1| TPA: hypothetical protein
           ZEAMMB73_271109 [Zea mays]
          Length = 155

 Score =  109 bits (272), Expect = 4e-22
 Identities = 52/62 (83%), Positives = 57/62 (91%)
 Frame = -2

Query: 235 ELTVPDVRLTKSRDGTNGTAIFRFEQPSMFDSSGELGDITGFYMIDEESVIQSVDVNAKF 56
           E T+PDVRLTKSRDGTNG AIF FEQPS+FDSS ELGDITGFYMID+E V+QSVDV+AKF
Sbjct: 55  EQTIPDVRLTKSRDGTNGVAIFTFEQPSVFDSSAELGDITGFYMIDDEGVLQSVDVSAKF 114

Query: 55  VN 50
           VN
Sbjct: 115 VN 116


>gb|AFK33586.1| unknown [Lotus japonicus]
          Length = 179

 Score =  109 bits (272), Expect = 4e-22
 Identities = 50/62 (80%), Positives = 58/62 (93%)
 Frame = -2

Query: 235 ELTVPDVRLTKSRDGTNGTAIFRFEQPSMFDSSGELGDITGFYMIDEESVIQSVDVNAKF 56
           ELT+PDVRLTKSRDGTNG AIF+FEQPS+FD+SGE+GDITG YMIDEE V+QS DV+AKF
Sbjct: 79  ELTIPDVRLTKSRDGTNGMAIFKFEQPSVFDASGEVGDITGLYMIDEEGVLQSTDVSAKF 138

Query: 55  VN 50
           +N
Sbjct: 139 IN 140