BLASTX nr result
ID: Rheum21_contig00027456
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00027456
(269 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAG10817.1|AC011808_5 Putative retroelement polyprotein [Arab... 62 3e-09
ref|XP_006367204.1| PREDICTED: uncharacterized protein LOC102583... 60 4e-09
gb|AAF69161.1|AC007915_13 F27F5.19 [Arabidopsis thaliana] 61 7e-09
emb|CAN76546.1| hypothetical protein VITISV_010420 [Vitis vinifera] 57 7e-09
emb|CAA72989.1| unnamed protein product [Brassica oleracea var. ... 57 9e-09
ref|XP_004241118.1| PREDICTED: uncharacterized protein LOC101264... 59 9e-09
ref|XP_004236387.1| PREDICTED: uncharacterized protein LOC101254... 59 9e-09
dbj|BAB09070.1| unnamed protein product [Arabidopsis thaliana] g... 59 9e-09
gb|AAD26943.1| putative retroelement pol polyprotein [Arabidopsi... 60 1e-08
dbj|BAD99219.1| polypeptide with a gag-like domain [Petunia x hy... 60 2e-08
ref|XP_004231364.1| PREDICTED: uncharacterized protein LOC101245... 60 3e-08
ref|XP_002280329.2| PREDICTED: cucumisin-like [Vitis vinifera] 55 3e-08
emb|CAN71241.1| hypothetical protein VITISV_009771 [Vitis vinifera] 58 3e-08
dbj|BAB10503.1| retroelement pol polyprotein-like [Arabidopsis t... 59 3e-08
emb|CAN63908.1| hypothetical protein VITISV_044218 [Vitis vinifera] 55 4e-08
emb|CAN74819.1| hypothetical protein VITISV_034590 [Vitis vinifera] 58 4e-08
ref|XP_004238518.1| PREDICTED: uncharacterized protein LOC101263... 58 4e-08
ref|XP_004243913.1| PREDICTED: uncharacterized protein LOC101256... 59 6e-08
emb|CAN61417.1| hypothetical protein VITISV_009790 [Vitis vinifera] 54 7e-08
ref|XP_002317615.1| predicted protein [Populus trichocarpa] 59 7e-08
>gb|AAG10817.1|AC011808_5 Putative retroelement polyprotein [Arabidopsis thaliana]
Length = 1413
Score = 61.6 bits (148), Expect(2) = 3e-09
Identities = 25/56 (44%), Positives = 36/56 (64%)
Frame = -1
Query: 200 RSDRASLLFRRWERCNNMLITWLLNSITMEIHDTFLIFGDTKQIWQDVNNRFSQVN 33
R + + L R W RCN+M+ +W+LNS+ EI+ + L F D QIW D++NRF N
Sbjct: 102 RPEEGNHLLRIWSRCNSMVKSWILNSVNREIYGSILSFDDAAQIWNDLHNRFHMTN 157
Score = 25.0 bits (53), Expect(2) = 3e-09
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = -2
Query: 259 SMTVALSAKNKLGFVD 212
+M +AL AKNK+ F+D
Sbjct: 82 AMKIALDAKNKIAFID 97
>ref|XP_006367204.1| PREDICTED: uncharacterized protein LOC102583847 [Solanum tuberosum]
gi|565405302|ref|XP_006368043.1| PREDICTED:
uncharacterized protein LOC102604738 [Solanum tuberosum]
Length = 258
Score = 60.1 bits (144), Expect(2) = 4e-09
Identities = 22/55 (40%), Positives = 39/55 (70%)
Frame = -1
Query: 167 WERCNNMLITWLLNSITMEIHDTFLIFGDTKQIWQDVNNRFSQVNNA*QYSVEKQ 3
W RCNNM+I+W++NS++ +I ++ L + K+IW+++ RF Q N A Y ++K+
Sbjct: 82 WSRCNNMVISWIINSLSRDIAESVLYYPTAKEIWKELEARFGQCNGAQLYQLQKE 136
Score = 26.2 bits (56), Expect(2) = 4e-09
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = -2
Query: 259 SMTVALSAKNKLGFVD 212
++ +ALSAKNKL F+D
Sbjct: 51 AIVIALSAKNKLSFID 66
>gb|AAF69161.1|AC007915_13 F27F5.19 [Arabidopsis thaliana]
Length = 1309
Score = 61.2 bits (147), Expect(2) = 7e-09
Identities = 26/67 (38%), Positives = 43/67 (64%)
Frame = -1
Query: 206 IARSDRASLLFRRWERCNNMLITWLLNSITMEIHDTFLIFGDTKQIWQDVNNRFSQVNNA 27
+ R D + +FR W RCN+M+ TWLLN ++ EI+D+ L + D ++W D+ +RF N
Sbjct: 114 LPRPDVSDRMFRIWSRCNSMVKTWLLNVVSKEIYDSILYYEDAVEMWNDLFSRFRVSNLP 173
Query: 26 *QYSVEK 6
+Y +E+
Sbjct: 174 RKYQLEQ 180
Score = 24.3 bits (51), Expect(2) = 7e-09
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -2
Query: 259 SMTVALSAKNKLGFVD 212
+M ++L AKNKL FVD
Sbjct: 96 AMRMSLDAKNKLSFVD 111
>emb|CAN76546.1| hypothetical protein VITISV_010420 [Vitis vinifera]
Length = 1288
Score = 57.0 bits (136), Expect(2) = 7e-09
Identities = 22/57 (38%), Positives = 38/57 (66%)
Frame = -1
Query: 206 IARSDRASLLFRRWERCNNMLITWLLNSITMEIHDTFLIFGDTKQIWQDVNNRFSQV 36
I+R L++ W RCN+M+ +W++N+++ EI D+ L IW+D+N+RF+QV
Sbjct: 75 ISRPMSHDLIYGAWNRCNSMISSWIINAVSREIADSLLYLDSACDIWRDLNDRFNQV 131
Score = 28.5 bits (62), Expect(2) = 7e-09
Identities = 12/18 (66%), Positives = 16/18 (88%)
Frame = -2
Query: 265 RYSMTVALSAKNKLGFVD 212
R +M +AL+AKNK+GFVD
Sbjct: 55 RXAMLMALTAKNKVGFVD 72
>emb|CAA72989.1| unnamed protein product [Brassica oleracea var. viridis]
Length = 1131
Score = 57.4 bits (137), Expect(2) = 9e-09
Identities = 23/58 (39%), Positives = 36/58 (62%)
Frame = -1
Query: 206 IARSDRASLLFRRWERCNNMLITWLLNSITMEIHDTFLIFGDTKQIWQDVNNRFSQVN 33
+ R D + FR W RCN+M+ +WLLNS++ +I+ + L D IW+D++ RF N
Sbjct: 61 LTRPDTSDPTFRLWSRCNSMVKSWLLNSVSPQIYRSILRLNDAADIWRDLHGRFHMTN 118
Score = 27.7 bits (60), Expect(2) = 9e-09
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = -2
Query: 259 SMTVALSAKNKLGFVD 212
+M +AL AKNK+GFVD
Sbjct: 43 AMKIALDAKNKIGFVD 58
>ref|XP_004241118.1| PREDICTED: uncharacterized protein LOC101264015 [Solanum
lycopersicum]
Length = 693
Score = 58.5 bits (140), Expect(2) = 9e-09
Identities = 23/62 (37%), Positives = 42/62 (67%)
Frame = -1
Query: 188 ASLLFRRWERCNNMLITWLLNSITMEIHDTFLIFGDTKQIWQDVNNRFSQVNNA*QYSVE 9
+S ++ W RCN+M+I+WLLNS++ +I ++ L K IW+++ +RF Q N A + ++
Sbjct: 87 SSPTYKAWNRCNDMVISWLLNSLSKDIAESVLYSKTAKDIWKELEDRFGQCNGAKLFQLQ 146
Query: 8 KQ 3
K+
Sbjct: 147 KE 148
Score = 26.6 bits (57), Expect(2) = 9e-09
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = -2
Query: 265 RYSMTVALSAKNKLGFVD 212
R ++ +ALSAKNKL F+D
Sbjct: 61 RRAVFIALSAKNKLSFID 78
>ref|XP_004236387.1| PREDICTED: uncharacterized protein LOC101254987 [Solanum
lycopersicum]
Length = 620
Score = 58.5 bits (140), Expect(2) = 9e-09
Identities = 23/62 (37%), Positives = 42/62 (67%)
Frame = -1
Query: 188 ASLLFRRWERCNNMLITWLLNSITMEIHDTFLIFGDTKQIWQDVNNRFSQVNNA*QYSVE 9
+S ++ W RCN+M+I+WLLNS++ +I ++ L K IW+++ +RF Q N A + ++
Sbjct: 87 SSPTYKAWNRCNDMVISWLLNSLSKDIAESVLYSKTAKDIWKELEDRFGQCNGAKLFQLQ 146
Query: 8 KQ 3
K+
Sbjct: 147 KE 148
Score = 26.6 bits (57), Expect(2) = 9e-09
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = -2
Query: 265 RYSMTVALSAKNKLGFVD 212
R ++ +ALSAKNKL F+D
Sbjct: 61 RRAVFIALSAKNKLSFID 78
>dbj|BAB09070.1| unnamed protein product [Arabidopsis thaliana]
gi|26450382|dbj|BAC42306.1| putative retroelement pol
polyprotein [Arabidopsis thaliana]
gi|28973203|gb|AAO63926.1| unknown protein [Arabidopsis
thaliana]
Length = 357
Score = 59.3 bits (142), Expect(2) = 9e-09
Identities = 24/58 (41%), Positives = 38/58 (65%)
Frame = -1
Query: 176 FRRWERCNNMLITWLLNSITMEIHDTFLIFGDTKQIWQDVNNRFSQVNNA*QYSVEKQ 3
FR W RCN+M+ +W+LNS+T +I+ + L F D +IW+D++ RF N Y + +Q
Sbjct: 123 FRVWSRCNSMVKSWILNSVTKQIYKSILRFNDAAEIWKDLDTRFHITNLPRSYQLTQQ 180
Score = 25.8 bits (55), Expect(2) = 9e-09
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = -2
Query: 265 RYSMTVALSAKNKLGFVD 212
+ +M VAL AKNK+ FVD
Sbjct: 93 KIAMFVALDAKNKIAFVD 110
>gb|AAD26943.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1454
Score = 59.7 bits (143), Expect(2) = 1e-08
Identities = 25/68 (36%), Positives = 44/68 (64%)
Frame = -1
Query: 206 IARSDRASLLFRRWERCNNMLITWLLNSITMEIHDTFLIFGDTKQIWQDVNNRFSQVNNA 27
++R + L FR W RCN+M+ +WLLNS++ +I+ + L D IW+D+N+RF+ N
Sbjct: 108 LSRPLESDLNFRLWSRCNSMVKSWLLNSVSPQIYRSILRMNDASDIWRDLNSRFNVTNLP 167
Query: 26 *QYSVEKQ 3
Y++ ++
Sbjct: 168 RTYNLTQE 175
Score = 25.0 bits (53), Expect(2) = 1e-08
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = -2
Query: 259 SMTVALSAKNKLGFVD 212
+M ++L AKNK GF+D
Sbjct: 90 AMLISLDAKNKTGFID 105
>dbj|BAD99219.1| polypeptide with a gag-like domain [Petunia x hybrida]
Length = 463
Score = 59.7 bits (143), Expect(2) = 2e-08
Identities = 20/66 (30%), Positives = 44/66 (66%)
Frame = -1
Query: 200 RSDRASLLFRRWERCNNMLITWLLNSITMEIHDTFLIFGDTKQIWQDVNNRFSQVNNA*Q 21
+ D+ LLF +W RC++M++ WLLNS++ EI ++ L +++WQ++ R+ Q++
Sbjct: 85 KPDKEDLLFEQWRRCSDMVLAWLLNSLSKEIAESVLYSQTAQELWQELEQRYGQIDGTKM 144
Query: 20 YSVEKQ 3
+ ++++
Sbjct: 145 FQLQRE 150
Score = 24.3 bits (51), Expect(2) = 2e-08
Identities = 9/12 (75%), Positives = 12/12 (100%)
Frame = -2
Query: 250 VALSAKNKLGFV 215
++LSAKNKLGF+
Sbjct: 68 ISLSAKNKLGFI 79
>ref|XP_004231364.1| PREDICTED: uncharacterized protein LOC101245809 [Solanum
lycopersicum]
Length = 1094
Score = 60.1 bits (144), Expect(2) = 3e-08
Identities = 24/70 (34%), Positives = 46/70 (65%)
Frame = -1
Query: 212 CEIARSDRASLLFRRWERCNNMLITWLLNSITMEIHDTFLIFGDTKQIWQDVNNRFSQVN 33
C RS S +R+WERC+N++ +W+LNS++ EI D+ D+ ++W+++ +R+ Q N
Sbjct: 71 CSRPRSSDPS--YRQWERCDNIVTSWILNSLSKEIADSVEYVQDSAELWKELEDRYEQTN 128
Query: 32 NA*QYSVEKQ 3
A Y ++++
Sbjct: 129 GAKLYQIQRE 138
Score = 23.5 bits (49), Expect(2) = 3e-08
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -2
Query: 265 RYSMTVALSAKNKLGFVD 212
R S+ LS KNKLGFV+
Sbjct: 51 RCSVMRTLSVKNKLGFVN 68
>ref|XP_002280329.2| PREDICTED: cucumisin-like [Vitis vinifera]
Length = 834
Score = 55.5 bits (132), Expect(2) = 3e-08
Identities = 21/56 (37%), Positives = 37/56 (66%)
Frame = -1
Query: 206 IARSDRASLLFRRWERCNNMLITWLLNSITMEIHDTFLIFGDTKQIWQDVNNRFSQ 39
I+R L++ W RCN+M+ +W++N+++ EI D+ L IW+D+N+RF+Q
Sbjct: 75 ISRPMSHDLIYGAWNRCNSMISSWIINAVSREIADSLLYLDSACDIWKDLNDRFNQ 130
Score = 28.1 bits (61), Expect(2) = 3e-08
Identities = 12/18 (66%), Positives = 16/18 (88%)
Frame = -2
Query: 265 RYSMTVALSAKNKLGFVD 212
R +M +AL+AKNK+GFVD
Sbjct: 55 RRAMLMALTAKNKVGFVD 72
>emb|CAN71241.1| hypothetical protein VITISV_009771 [Vitis vinifera]
Length = 619
Score = 58.2 bits (139), Expect(2) = 3e-08
Identities = 29/76 (38%), Positives = 45/76 (59%)
Frame = -1
Query: 233 KQAWICGCEIARSDRASLLFRRWERCNNMLITWLLNSITMEIHDTFLIFGDTKQIWQDVN 54
K A+I G + R D LL+ W R N+M+ +W+LNS++ EI D+ L +IWQD+
Sbjct: 117 KIAFIDGT-LPRPDSGHLLYNAWIRYNSMVTSWILNSVSKEIVDSLLYIETVSKIWQDLR 175
Query: 53 NRFSQVNNA*QYSVEK 6
+RF Q N + ++K
Sbjct: 176 DRFHQSNGPRIFQIKK 191
Score = 25.4 bits (54), Expect(2) = 3e-08
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -2
Query: 259 SMTVALSAKNKLGFVD 212
SMT AL+A NK+ F+D
Sbjct: 107 SMTTALTAMNKIAFID 122
>dbj|BAB10503.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1475
Score = 59.3 bits (142), Expect(2) = 3e-08
Identities = 24/58 (41%), Positives = 38/58 (65%)
Frame = -1
Query: 176 FRRWERCNNMLITWLLNSITMEIHDTFLIFGDTKQIWQDVNNRFSQVNNA*QYSVEKQ 3
FR W RCN+M+ +W+LNS+T +I+ + L F D +IW+D++ RF N Y + +Q
Sbjct: 120 FRVWSRCNSMVKSWILNSVTKQIYKSILRFNDAAEIWKDLDTRFHITNLPRSYQLTQQ 177
Score = 23.9 bits (50), Expect(2) = 3e-08
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -2
Query: 265 RYSMTVALSAKNKLGFVD 212
+ +M V+L AKNK+ FVD
Sbjct: 90 KIAMFVSLYAKNKIAFVD 107
>emb|CAN63908.1| hypothetical protein VITISV_044218 [Vitis vinifera]
Length = 1236
Score = 55.1 bits (131), Expect(2) = 4e-08
Identities = 17/54 (31%), Positives = 39/54 (72%)
Frame = -1
Query: 167 WERCNNMLITWLLNSITMEIHDTFLIFGDTKQIWQDVNNRFSQVNNA*QYSVEK 6
W++CN+M+++W+LNS++ ++ D+ + +++W+D+ +RFSQ N + +E+
Sbjct: 79 WKKCNDMILSWILNSLSQDLADSVIFSTTAQEVWEDLRDRFSQTNAPHIFQIER 132
Score = 27.7 bits (60), Expect(2) = 4e-08
Identities = 10/16 (62%), Positives = 16/16 (100%)
Frame = -2
Query: 259 SMTVALSAKNKLGFVD 212
+MT++L+AK+KLGF+D
Sbjct: 46 AMTISLNAKSKLGFID 61
>emb|CAN74819.1| hypothetical protein VITISV_034590 [Vitis vinifera]
Length = 970
Score = 57.8 bits (138), Expect(2) = 4e-08
Identities = 25/59 (42%), Positives = 37/59 (62%)
Frame = -1
Query: 182 LLFRRWERCNNMLITWLLNSITMEIHDTFLIFGDTKQIWQDVNNRFSQVNNA*QYSVEK 6
LLF W RCN+M+I+W+LNS+ +I D+ L F IW D+ +RF Q N + ++K
Sbjct: 82 LLFGTWIRCNSMVISWILNSVHKDIADSLLYFDTAVGIWNDLRDRFCQSNGPRIFQIKK 140
Score = 25.0 bits (53), Expect(2) = 4e-08
Identities = 9/16 (56%), Positives = 14/16 (87%)
Frame = -2
Query: 259 SMTVALSAKNKLGFVD 212
+M +AL+AKNK+ F+D
Sbjct: 56 AMVMALTAKNKISFID 71
>ref|XP_004238518.1| PREDICTED: uncharacterized protein LOC101263410 [Solanum
lycopersicum]
Length = 338
Score = 57.8 bits (138), Expect(2) = 4e-08
Identities = 20/56 (35%), Positives = 40/56 (71%)
Frame = -1
Query: 170 RWERCNNMLITWLLNSITMEIHDTFLIFGDTKQIWQDVNNRFSQVNNA*QYSVEKQ 3
+W+RC++M+ +W+LNS+T EI D+ D+ ++W+++ +R+ Q N A Y ++K+
Sbjct: 29 QWQRCDDMVTSWILNSLTKEIADSVEYVSDSVELWKELEDRYDQTNGAKLYQIQKE 84
Score = 25.0 bits (53), Expect(2) = 4e-08
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -2
Query: 247 ALSAKNKLGFVD 212
ALS KNKLGF+D
Sbjct: 3 ALSVKNKLGFID 14
>ref|XP_004243913.1| PREDICTED: uncharacterized protein LOC101256606 [Solanum
lycopersicum]
Length = 388
Score = 59.3 bits (142), Expect(2) = 6e-08
Identities = 21/58 (36%), Positives = 42/58 (72%)
Frame = -1
Query: 176 FRRWERCNNMLITWLLNSITMEIHDTFLIFGDTKQIWQDVNNRFSQVNNA*QYSVEKQ 3
FR+WERC++M+ +W+LNS+T EI ++ D+ ++W+++ +R+ Q N A Y ++++
Sbjct: 84 FRQWERCDDMVTSWILNSLTKEIAESVEYVFDSYELWKELEDRYDQTNGAKLYQIQRE 141
Score = 23.1 bits (48), Expect(2) = 6e-08
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -2
Query: 265 RYSMTVALSAKNKLGFVD 212
R S+ LS KNKLGF++
Sbjct: 54 RRSVLRVLSVKNKLGFIN 71
>emb|CAN61417.1| hypothetical protein VITISV_009790 [Vitis vinifera]
Length = 332
Score = 54.3 bits (129), Expect(2) = 7e-08
Identities = 17/54 (31%), Positives = 39/54 (72%)
Frame = -1
Query: 167 WERCNNMLITWLLNSITMEIHDTFLIFGDTKQIWQDVNNRFSQVNNA*QYSVEK 6
W++CN+M+++W+LNS++ ++ D+ + +++W+D+ +RFSQ N + +E+
Sbjct: 79 WKKCNDMILSWILNSLSQDLADSVIFSTTAQEVWEDLRDRFSQSNAPRIFQIER 132
Score = 27.7 bits (60), Expect(2) = 7e-08
Identities = 10/16 (62%), Positives = 16/16 (100%)
Frame = -2
Query: 259 SMTVALSAKNKLGFVD 212
+MT++L+AK+KLGF+D
Sbjct: 46 AMTISLNAKSKLGFID 61
>ref|XP_002317615.1| predicted protein [Populus trichocarpa]
Length = 278
Score = 58.9 bits (141), Expect(2) = 7e-08
Identities = 22/67 (32%), Positives = 42/67 (62%)
Frame = -1
Query: 233 KQAWICGCEIARSDRASLLFRRWERCNNMLITWLLNSITMEIHDTFLIFGDTKQIWQDVN 54
K +I G + ++ LF WERCN+M+++W+ N+++ +I T + D + +W ++N
Sbjct: 70 KLGFISGNIVRPTNEEDPLFEMWERCNDMVVSWIQNAVSTDIKHTLVFVDDAQMVWTELN 129
Query: 53 NRFSQVN 33
+RF+Q N
Sbjct: 130 DRFTQQN 136
Score = 23.1 bits (48), Expect(2) = 7e-08
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = -2
Query: 259 SMTVALSAKNKLGFV 215
SM AL A+NKLGF+
Sbjct: 60 SMRRALRARNKLGFI 74