BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00027282
         (744 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632809.1| PREDICTED: pentatricopeptide repeat-containi...   249   9e-64
ref|XP_006465489.1| PREDICTED: pentatricopeptide repeat-containi...   224   3e-56
ref|XP_006427244.1| hypothetical protein CICLE_v100249421mg, par...   222   1e-55
ref|XP_004305514.1| PREDICTED: pentatricopeptide repeat-containi...   216   8e-54
ref|XP_002891705.1| pentatricopeptide repeat-containing protein ...   212   9e-53
emb|CBI36298.3| unnamed protein product [Vitis vinifera]              212   9e-53
ref|XP_004236463.1| PREDICTED: pentatricopeptide repeat-containi...   209   8e-52
gb|EXB67318.1| hypothetical protein L484_025800 [Morus notabilis]     209   1e-51
gb|ESW22733.1| hypothetical protein PHAVU_005G176600g [Phaseolus...   208   1e-51
ref|XP_004152354.1| PREDICTED: pentatricopeptide repeat-containi...   208   1e-51
ref|XP_006364204.1| PREDICTED: pentatricopeptide repeat-containi...   207   3e-51
ref|NP_175671.1| pentatricopeptide repeat-containing protein [Ar...   207   3e-51
gb|EOY26480.1| Pentatricopeptide repeat (PPR) superfamily protei...   203   4e-50
gb|EMJ17621.1| hypothetical protein PRUPE_ppa023053mg [Prunus pe...   202   7e-50
ref|XP_003546931.1| PREDICTED: pentatricopeptide repeat-containi...   201   2e-49
ref|XP_002326537.1| predicted protein [Populus trichocarpa] gi|5...   201   3e-49
ref|XP_006392899.1| hypothetical protein EUTSA_v10011244mg [Eutr...   199   6e-49
dbj|BAJ53231.1| JHL06P13.11 [Jatropha curcas]                         196   7e-48
ref|XP_003542113.1| PREDICTED: pentatricopeptide repeat-containi...   191   2e-46
ref|XP_003597874.1| Pentatricopeptide repeat-containing protein ...   187   2e-45

>ref|XP_003632809.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Vitis vinifera]
          Length = 879

 Score =  249 bits (635), Expect = 9e-64
 Identities = 122/234 (52%), Positives = 171/234 (73%)
 Frame = +3

Query: 42  MSKRVLSVIKPRQNPKPSSLQTPSYEPNLRKLAYTVTKILHTHQNWDQILQTHLARESID 221
           MSK +L +IK +  P P S   PS +P +  L   + ++LHTH  W++ LQT  +   + 
Sbjct: 1   MSKTLLCLIKSKAKPTPPS--KPSLKPRINNLVKDILEVLHTHNQWEENLQTRFSESEVL 58

Query: 222 ASEIAPLVFDRIRDVELGIKFFDWVLRNKYWSSLDRYGYSSFLKLLARNKAFSEAEDVLN 401
           AS++A LV DRIRDVELG+KFFDWV R +Y   ++ + YSS LKLLAR++ FSE E VL 
Sbjct: 59  ASDVAHLVLDRIRDVELGLKFFDWVSRGQYSGPINGFAYSSLLKLLARSRVFSEMEVVLE 118

Query: 402 SLKLEGFLPTREALDDLIRNYSVSGLVDRALEVYKLVIETYNCLPNVLACNALLDVLVKQ 581
           ++++E   PTREA+  +I+ YS SGLV++ALE+Y  V++TY   P+V+ACN+LL++LVK 
Sbjct: 119 NMRVEEMSPTREAMSIVIQAYSDSGLVEKALELYYFVLKTYTYFPDVIACNSLLNMLVKL 178

Query: 582 RRIGVALDIYDEMLKRDIGGGDKSMDNYSTCIIVRALCREGKVDKGRKLIEDRW 743
            RI +A  +YDEML+ D G GD+ +DNYSTCI+V+ LC+EGK+++GRKLIEDRW
Sbjct: 179 GRIEIARKLYDEMLEID-GAGDRCVDNYSTCIMVKGLCKEGKLEEGRKLIEDRW 231


>ref|XP_006465489.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52620-like
            [Citrus sinensis]
          Length = 1259

 Score =  224 bits (570), Expect = 3e-56
 Identities = 122/238 (51%), Positives = 164/238 (68%), Gaps = 3/238 (1%)
 Frame = +3

Query: 39   LMSKRVLSVIKPRQNPKPSSLQTPSYE--PNLRKLAYTVTKILHTHQNWDQILQTHLARE 212
            LMSK +LS IKP QN KPSS  +  +   P+++KL     +IL TH  +DQ L+   + E
Sbjct: 445  LMSKTLLSRIKPLQNQKPSSSSSSPFPLAPHIKKLVNETIEILKTHPQYDQSLEIRFSDE 504

Query: 213  SIDASEIAPLVFDRIRDVELGIKFFDWVLRNKYWSSLDR-YGYSSFLKLLARNKAFSEAE 389
                SEIA  VFDRIR++ELG+KFFDW+ R +  +S    Y  SSFLKLLAR + FSE E
Sbjct: 505  ETYVSEIAHHVFDRIRELELGLKFFDWLSRQQPKNSFSNGYACSSFLKLLARFRVFSEIE 564

Query: 390  DVLNSLKLEGFLPTREALDDLIRNYSVSGLVDRALEVYKLVIETYNCLPNVLACNALLDV 569
             VL +LK++G  PT EAL  +IR Y+ SGLVD+A+++Y  +   YN +P+V  CN+LL++
Sbjct: 565  LVLKNLKIDGIKPTHEALSVIIRAYAESGLVDKAIDLYNNLFVPYNSVPDVFTCNSLLNL 624

Query: 570  LVKQRRIGVALDIYDEMLKRDIGGGDKSMDNYSTCIIVRALCREGKVDKGRKLIEDRW 743
            LVK +RI +A  +YDEM K D G     +DNYSTCI+VR LC+EGKV++G+ LIEDR+
Sbjct: 625  LVKCKRIEMARKLYDEMCKTDDG-----LDNYSTCIMVRGLCKEGKVEEGKNLIEDRF 677


>ref|XP_006427244.1| hypothetical protein CICLE_v100249421mg, partial [Citrus
           clementina] gi|557529234|gb|ESR40484.1| hypothetical
           protein CICLE_v100249421mg, partial [Citrus clementina]
          Length = 282

 Score =  222 bits (565), Expect = 1e-55
 Identities = 121/237 (51%), Positives = 162/237 (68%), Gaps = 3/237 (1%)
 Frame = +3

Query: 42  MSKRVLSVIKPRQNPKPSSLQTPSYE--PNLRKLAYTVTKILHTHQNWDQILQTHLARES 215
           MSK +LS IKP QN KPSS  +  +   P+++KL     +IL TH  +DQ L+   + E 
Sbjct: 1   MSKTILSRIKPLQNQKPSSSSSSPFPLAPHIKKLVNETIEILKTHPQYDQSLEIRFSDEE 60

Query: 216 IDASEIAPLVFDRIRDVELGIKFFDWVLRNKYWSSLDR-YGYSSFLKLLARNKAFSEAED 392
              SEIA  V DRIRD+ELG+KFFDW+ R +  +S    Y  SSFLKLLAR + FSE E 
Sbjct: 61  TYVSEIAHHVLDRIRDLELGLKFFDWLSRQQPKNSFSNGYACSSFLKLLARFRVFSEIEL 120

Query: 393 VLNSLKLEGFLPTREALDDLIRNYSVSGLVDRALEVYKLVIETYNCLPNVLACNALLDVL 572
           VL +LK++G  PT EAL  +IR Y+ SGLVD+A+++Y  +   YN +P+V  CN+LL++L
Sbjct: 121 VLKNLKIDGIKPTHEALSVIIRAYAESGLVDKAIDLYTNLFVPYNSVPDVFTCNSLLNLL 180

Query: 573 VKQRRIGVALDIYDEMLKRDIGGGDKSMDNYSTCIIVRALCREGKVDKGRKLIEDRW 743
           VK +RI +A  +YDEM K D G     +DNYSTCI+VR LC+EGKV++G+ LIEDR+
Sbjct: 181 VKCKRIEMARKLYDEMCKTDDG-----LDNYSTCIMVRGLCKEGKVEEGKNLIEDRF 232


>ref|XP_004305514.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Fragaria vesca subsp. vesca]
          Length = 820

 Score =  216 bits (549), Expect = 8e-54
 Identities = 113/235 (48%), Positives = 155/235 (65%), Gaps = 1/235 (0%)
 Frame = +3

Query: 42  MSKRVLSVIKPRQNPKPSSLQTPSYEPNLRKLAYTVTKILHTHQNWDQILQTHLARESID 221
           MSK +LS IKP   PKP+   +PS  P+++ L +    IL THQ W+Q LQTH +     
Sbjct: 1   MSKTLLSRIKPLHTPKPTR-SSPSSPPHIKNLVHETIHILTTHQQWEQSLQTHFSETRTH 59

Query: 222 ASEIAPLVFDRIRDVELGIKFFDWVLRNKYWSSLDRYGYSSFLKLLARNKAFSEAEDVLN 401
            S++A  V D+I + ELG+KFFDW  R  Y  S     Y+S LK LA     SE E+V+ 
Sbjct: 60  VSDVAHFVLDKIPNAELGLKFFDWAFRRPYCCSPTGSAYNSLLKRLAWFGVVSEIENVMQ 119

Query: 402 SLKLEGFLPTREALDDLIRNYSVSGLVDRALEVYKLVIETYNCLPNVLACNALLDVLVKQ 581
           S+K+E   P+++AL  +I  Y+ SGLVD+ALE+Y   + +   +P+V ACNALL VLVK 
Sbjct: 120 SMKVEDVKPSKDALSFVILAYADSGLVDKALELYGFGVHSCGSVPSVYACNALLMVLVKN 179

Query: 582 RRIGVALDIYDEMLKRDIGGGD-KSMDNYSTCIIVRALCREGKVDKGRKLIEDRW 743
            R+ VA  +YDEML++D G G+   +DNYSTCI+VR LC+EGKV++GR+LI +RW
Sbjct: 180 GRVDVARQVYDEMLEKDGGDGEGVCVDNYSTCIMVRGLCKEGKVEEGRRLIVERW 234


>ref|XP_002891705.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297337547|gb|EFH67964.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 823

 Score =  212 bits (540), Expect = 9e-53
 Identities = 114/237 (48%), Positives = 155/237 (65%), Gaps = 3/237 (1%)
 Frame = +3

Query: 42  MSKRVLSVIKPRQNPKPSSLQTPSYE--PNLRKLAYTVTKILHTHQNWDQILQTHLARES 215
           MSK +LS IKP  NP PS+     +   P ++KL      IL T QNW QIL    A E 
Sbjct: 1   MSKTLLSRIKPLTNPPPSNSFRSHFPITPRIKKLVSDTVSILKTQQNWSQILDDCFADEE 60

Query: 216 IDASEIAPLVFDRIRDVELGIKFFDWVLRNKYWSSLDR-YGYSSFLKLLARNKAFSEAED 392
           +   +I+P VFDRI+DVE+G+K FDW+   K        +  SSFLKLLAR++ F+E ED
Sbjct: 61  VRFVDISPFVFDRIQDVEIGVKLFDWLSSEKKDEFFSNGFACSSFLKLLARHRIFNEIED 120

Query: 393 VLNSLKLEGFLPTREALDDLIRNYSVSGLVDRALEVYKLVIETYNCLPNVLACNALLDVL 572
           VL +L+ E    T EAL  ++  Y+ SG + +A+E+Y  V+E Y+ +P+V+ACNALL ++
Sbjct: 121 VLGNLRNENVKLTHEALSHVLHAYAESGFLSKAVEIYDYVVELYDSVPDVIACNALLSLV 180

Query: 573 VKQRRIGVALDIYDEMLKRDIGGGDKSMDNYSTCIIVRALCREGKVDKGRKLIEDRW 743
           VK RR+  A  +YDEM +R  GG    +DNYSTCI+V+ +C EGKV++GRKLIEDRW
Sbjct: 181 VKSRRLEDARKVYDEMCER--GG---CVDNYSTCIMVKGMCSEGKVEEGRKLIEDRW 232


>emb|CBI36298.3| unnamed protein product [Vitis vinifera]
          Length = 641

 Score =  212 bits (540), Expect = 9e-53
 Identities = 109/234 (46%), Positives = 154/234 (65%)
 Frame = +3

Query: 42  MSKRVLSVIKPRQNPKPSSLQTPSYEPNLRKLAYTVTKILHTHQNWDQILQTHLARESID 221
           MSK +L +IK +  P P S   PS +P +  L   + ++LHTH  W++ LQT  +   + 
Sbjct: 1   MSKTLLCLIKSKAKPTPPS--KPSLKPRINNLVKDILEVLHTHNQWEENLQTRFSESEVL 58

Query: 222 ASEIAPLVFDRIRDVELGIKFFDWVLRNKYWSSLDRYGYSSFLKLLARNKAFSEAEDVLN 401
           AS++A LV DRIRDVELG+KFFDWV R +Y   ++ + YSS LKLLAR++ FSE E VL 
Sbjct: 59  ASDVAHLVLDRIRDVELGLKFFDWVSRGQYSGPINGFAYSSLLKLLARSRVFSEMEVVLE 118

Query: 402 SLKLEGFLPTREALDDLIRNYSVSGLVDRALEVYKLVIETYNCLPNVLACNALLDVLVKQ 581
           ++++E   PTREA+  +I+ YS SGLV++ALE+Y  V++TY   P+V+ACN+LL++LVK 
Sbjct: 119 NMRVEEMSPTREAMSIVIQAYSDSGLVEKALELYYFVLKTYTYFPDVIACNSLLNMLVKL 178

Query: 582 RRIGVALDIYDEMLKRDIGGGDKSMDNYSTCIIVRALCREGKVDKGRKLIEDRW 743
            RI +A                       TCI+V+ LC+EGK+++GRKLIEDRW
Sbjct: 179 GRIEIARKF--------------------TCIMVKGLCKEGKLEEGRKLIEDRW 212


>ref|XP_004236463.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Solanum lycopersicum]
          Length = 828

 Score =  209 bits (532), Expect = 8e-52
 Identities = 113/238 (47%), Positives = 156/238 (65%), Gaps = 4/238 (1%)
 Frame = +3

Query: 42  MSKRVLSVIKPRQNPKPSSLQTPSYEPNLRKLAYTVTK---ILHTHQNWDQILQTHLARE 212
           MSK +LS IKP  NPKP    + S  P  R++   V +   ILHT Q W+  ++  L++E
Sbjct: 1   MSKTLLSRIKPLHNPKPKPPSSSSNFPLTRRIKEVVNEVCQILHTQQQWEDAVEIRLSQE 60

Query: 213 SIDASEIAPLVFDRIRDVELGIKFFDWVLRNKYWSSLDRYGYSSFLKLLARNKAFSEAED 392
            I   +IA LVFD+++D  +G+KFFDWV +      LDR+  SS LKLLA+ + F E + 
Sbjct: 61  EIVPPDIAHLVFDKLKDAHVGLKFFDWVSQRPDGCPLDRFACSSLLKLLAKFRVFPEIDS 120

Query: 393 VLNSLKL-EGFLPTREALDDLIRNYSVSGLVDRALEVYKLVIETYNCLPNVLACNALLDV 569
           +L+SL   E   PT EALD +I+ YS S LVD+A+E+Y  V+ TYN +P+V+  N+LL  
Sbjct: 121 LLSSLTTCEDKFPTLEALDAVIKAYSDSNLVDKAVELYYFVLRTYNLVPHVVTVNSLLHG 180

Query: 570 LVKQRRIGVALDIYDEMLKRDIGGGDKSMDNYSTCIIVRALCREGKVDKGRKLIEDRW 743
           LVK  +I  A  +YDE+++R  G  DK +DN+STCIIV  L +EG V++GRKLIEDRW
Sbjct: 181 LVKHGKIKTARRLYDELVERSGGVEDKFLDNFSTCIIVTGLSKEGNVEEGRKLIEDRW 238


>gb|EXB67318.1| hypothetical protein L484_025800 [Morus notabilis]
          Length = 811

 Score =  209 bits (531), Expect = 1e-51
 Identities = 111/234 (47%), Positives = 154/234 (65%)
 Frame = +3

Query: 42  MSKRVLSVIKPRQNPKPSSLQTPSYEPNLRKLAYTVTKILHTHQNWDQILQTHLARESID 221
           MSK  LS IKP Q P  SS       P LRKL +    IL T+  W   L+TH  +  + 
Sbjct: 1   MSKMFLSRIKPSQVPSSSS-------PQLRKLVHDTIHILQTNHQWQNSLRTHFDQSDVL 53

Query: 222 ASEIAPLVFDRIRDVELGIKFFDWVLRNKYWSSLDRYGYSSFLKLLARNKAFSEAEDVLN 401
            S++A LV DR+   +LG+KFF W  ++ ++   +   YSS LKLLAR++AFSE E V+ 
Sbjct: 54  VSDVAHLVLDRVPSAQLGLKFFHWGSQSPHFRFSNGLAYSSLLKLLARSRAFSEIEPVMG 113

Query: 402 SLKLEGFLPTREALDDLIRNYSVSGLVDRALEVYKLVIETYNCLPNVLACNALLDVLVKQ 581
           ++++E   PT +AL  L+R ++ SGLVD+ALE Y  V+E Y  +P+V+ACN+LL+ LVK+
Sbjct: 114 NMRIEEIKPTLDALSLLVRAHADSGLVDKALEFYFKVVEMYGRVPSVVACNSLLEALVKR 173

Query: 582 RRIGVALDIYDEMLKRDIGGGDKSMDNYSTCIIVRALCREGKVDKGRKLIEDRW 743
           RR  VA  +Y +ML R + G    +D YST IIV+ALC+EG++D+GRKLIEDRW
Sbjct: 174 RRFDVARKVYGKMLTR-VDGEIDHVDKYSTSIIVKALCKEGRIDEGRKLIEDRW 226


>gb|ESW22733.1| hypothetical protein PHAVU_005G176600g [Phaseolus vulgaris]
          Length = 820

 Score =  208 bits (530), Expect = 1e-51
 Identities = 113/234 (48%), Positives = 156/234 (66%)
 Frame = +3

Query: 42  MSKRVLSVIKPRQNPKPSSLQTPSYEPNLRKLAYTVTKILHTHQNWDQILQTHLARESID 221
           MSK +LS IKPR  PK SS    S  P +  L   V +IL +HQ+ ++ LQ+ LA+  + 
Sbjct: 1   MSKAILSRIKPRHRPKTSS----SLPPRINNLVSDVIRILKSHQS-EESLQSRLAQSHVV 55

Query: 222 ASEIAPLVFDRIRDVELGIKFFDWVLRNKYWSSLDRYGYSSFLKLLARNKAFSEAEDVLN 401
            S+IA  V DRI D EL +KFFDWV    +  SLD   +SS LKLL+R + FSE E VL 
Sbjct: 56  VSDIAHFVIDRIHDPELALKFFDWVSTRPFSCSLDGVAHSSLLKLLSRFRVFSEIELVLE 115

Query: 402 SLKLEGFLPTREALDDLIRNYSVSGLVDRALEVYKLVIETYNCLPNVLACNALLDVLVKQ 581
           S+K++  +PTR A   LI  Y+  G VDRAL+++  V E ++C P+V+ACN+LL+ LVK 
Sbjct: 116 SMKVQHLIPTRAAFSALILAYAECGSVDRALQLFHAVREMHSCFPSVVACNSLLNGLVKS 175

Query: 582 RRIGVALDIYDEMLKRDIGGGDKSMDNYSTCIIVRALCREGKVDKGRKLIEDRW 743
            ++ VAL +YDEML+ D G G  ++DNYST I+V+ LC  GK+++G +LI+DRW
Sbjct: 176 GKVDVALQLYDEMLQTDDGTG-AAVDNYSTSIVVKGLCNSGKIEEGWRLIKDRW 228


>ref|XP_004152354.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Cucumis sativus]
           gi|449484425|ref|XP_004156880.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g52620-like [Cucumis sativus]
          Length = 834

 Score =  208 bits (530), Expect = 1e-51
 Identities = 110/236 (46%), Positives = 151/236 (63%), Gaps = 2/236 (0%)
 Frame = +3

Query: 42  MSKRVLSVIKPRQNPKPSSLQTPS--YEPNLRKLAYTVTKILHTHQNWDQILQTHLARES 215
           MSK +LS I P +N KP S    S  +   +++L     +IL +H+ W+Q LQTH     
Sbjct: 1   MSKTLLSRINPLRNCKPKSSPPFSIPFRGEIKRLVNDTIQILKSHEKWEQSLQTHFTESD 60

Query: 216 IDASEIAPLVFDRIRDVELGIKFFDWVLRNKYWSSLDRYGYSSFLKLLARNKAFSEAEDV 395
           I   ++   V DRI DVELG+KFFDW  +N    SL+   YSS LKLL+R + F E E  
Sbjct: 61  IPIIDVTHFVLDRINDVELGLKFFDWASKNSLSGSLNGTSYSSLLKLLSRFRVFPEIEFT 120

Query: 396 LNSLKLEGFLPTREALDDLIRNYSVSGLVDRALEVYKLVIETYNCLPNVLACNALLDVLV 575
           L  +K +  +PTREAL D++  Y+  GLVD+ALEVY  V++ +N LP+  ACN+LL++LV
Sbjct: 121 LEEMKTKETIPTREALSDVLCAYADVGLVDKALEVYHGVVKLHNSLPSTYACNSLLNLLV 180

Query: 576 KQRRIGVALDIYDEMLKRDIGGGDKSMDNYSTCIIVRALCREGKVDKGRKLIEDRW 743
           K RRI  A  +YDEM+ RD  G D  +DNY+T I+V+ LC +G+++ G KLIE RW
Sbjct: 181 KHRRIETAHQLYDEMIDRD-NGDDICVDNYTTSIMVKGLCLKGRIEDGIKLIESRW 235


>ref|XP_006364204.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like isoform X1 [Solanum tuberosum]
           gi|565397234|ref|XP_006364205.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g52620-like isoform X2 [Solanum tuberosum]
          Length = 816

 Score =  207 bits (527), Expect = 3e-51
 Identities = 114/238 (47%), Positives = 157/238 (65%), Gaps = 4/238 (1%)
 Frame = +3

Query: 42  MSKRVLSVIKPRQNPKP---SSLQTPSYEPNLRKLAYTVTKILHTHQNWDQILQTHLARE 212
           MSK +LS IKP  NPKP   SS   P     +++L   V +IL T Q W+  ++  L++E
Sbjct: 1   MSKTLLSRIKPLHNPKPKPPSSSNLPLTR-RIKELVNEVCQILQTQQQWENAVEIRLSQE 59

Query: 213 SIDASEIAPLVFDRIRDVELGIKFFDWVLRNKYWSSLDRYGYSSFLKLLARNKAFSEAED 392
            I  S+IA LVFD+++D  +G+KFFDWV +  Y   LDR+  SS LKLLA+ + F E E 
Sbjct: 60  EIVPSDIAHLVFDKLKDAHVGLKFFDWVSQRPYGCPLDRFACSSLLKLLAKFRVFPEIES 119

Query: 393 VLNSLKL-EGFLPTREALDDLIRNYSVSGLVDRALEVYKLVIETYNCLPNVLACNALLDV 569
           +L+SL   E   PT EALD +I+ YS S LVD+A+E+Y  V+ TY+ +P+V+  N+LL  
Sbjct: 120 LLSSLTTCEDKFPTLEALDAVIKAYSDSNLVDKAVELYYFVLRTYDLVPHVVTVNSLLHG 179

Query: 570 LVKQRRIGVALDIYDEMLKRDIGGGDKSMDNYSTCIIVRALCREGKVDKGRKLIEDRW 743
           LVK  +I  A  +YDE+++R  G  D  +DN+STCIIV  L +EG V++GRKLIEDRW
Sbjct: 180 LVKHGKIKAARRLYDELVERSGGVEDNFLDNFSTCIIVTGLSKEGYVEEGRKLIEDRW 237


>ref|NP_175671.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75207557|sp|Q9SSR4.1|PPR77_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g52620 gi|5903044|gb|AAD55603.1|AC008016_13 Contains
           3 PF|01535 DUF domains [Arabidopsis thaliana]
           gi|332194709|gb|AEE32830.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 819

 Score =  207 bits (527), Expect = 3e-51
 Identities = 114/237 (48%), Positives = 151/237 (63%), Gaps = 3/237 (1%)
 Frame = +3

Query: 42  MSKRVLSVIKPRQNPKPSSLQTPSYE--PNLRKLAYTVTKILHTHQNWDQILQTHLARES 215
           MSK +LS IKP  NP  S+         P ++KL      IL T QNW QIL    A E 
Sbjct: 1   MSKTLLSRIKPLSNPHASNSFRSHLPITPRIKKLVSDTVSILKTQQNWSQILDDCFADEE 60

Query: 216 IDASEIAPLVFDRIRDVELGIKFFDWVLRNKYWSSLDR-YGYSSFLKLLARNKAFSEAED 392
           +   +I+P VFDRI+DVE+G+K FDW+   K        +  SSFLKLLAR + F+E ED
Sbjct: 61  VRFVDISPFVFDRIQDVEIGVKLFDWLSSEKKDEFFSNGFACSSFLKLLARYRIFNEIED 120

Query: 393 VLNSLKLEGFLPTREALDDLIRNYSVSGLVDRALEVYKLVIETYNCLPNVLACNALLDVL 572
           VL +L+ E    T EAL  ++  Y+ SG + +A+E+Y  V+E Y+ +P+V+ACN+LL +L
Sbjct: 121 VLGNLRNENVKLTHEALSHVLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLL 180

Query: 573 VKQRRIGVALDIYDEMLKRDIGGGDKSMDNYSTCIIVRALCREGKVDKGRKLIEDRW 743
           VK RR+G A  +YDEM  R    GD S+DNYSTCI+V+ +C EGKV+ GRKLIE RW
Sbjct: 181 VKSRRLGDARKVYDEMCDR----GD-SVDNYSTCILVKGMCNEGKVEVGRKLIEGRW 232


>gb|EOY26480.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
           isoform 1 [Theobroma cacao] gi|508779226|gb|EOY26482.1|
           Pentatricopeptide repeat (PPR) superfamily protein,
           putative isoform 1 [Theobroma cacao]
          Length = 817

 Score =  203 bits (517), Expect = 4e-50
 Identities = 108/235 (45%), Positives = 150/235 (63%), Gaps = 1/235 (0%)
 Frame = +3

Query: 42  MSKRVLSVIKPRQNPKPSSLQTPSYEPNLRKLAYTVTKILHTHQNWDQILQTHLARESID 221
           MSK +LS IKP   PK +      + P L+ L     +IL TH  W   L+T    E   
Sbjct: 1   MSKTLLSRIKPLHIPKRNPSPPFRFPPRLKILITETIQILKTHPQWPDSLETRFCDEETC 60

Query: 222 ASEIAPLVFDRIRDVELGIKFFDWVLRNK-YWSSLDRYGYSSFLKLLARNKAFSEAEDVL 398
            SE+A  VFD I DVELGIKFFDWV + +     L+   +SSFLKLLAR + FSE E  L
Sbjct: 61  VSEVAHYVFDHIHDVELGIKFFDWVSKQEPQHFPLNELAHSSFLKLLARFRLFSEIETAL 120

Query: 399 NSLKLEGFLPTREALDDLIRNYSVSGLVDRALEVYKLVIETYNCLPNVLACNALLDVLVK 578
            ++K+E   PT EAL  ++R Y  SG VD+ALE++  V+  YN +PNV ACN+LL+ LV+
Sbjct: 121 ENMKMEEIKPTHEALSFIVRVYVDSGFVDKALELFYSVVNIYNSVPNVSACNSLLNSLVE 180

Query: 579 QRRIGVALDIYDEMLKRDIGGGDKSMDNYSTCIIVRALCREGKVDKGRKLIEDRW 743
            +++ +A  ++DEM++R     +  +DNYS CI+V+ LC+ GKV++G+KL+EDRW
Sbjct: 181 LKKVEIAHQVFDEMVER-----EGCVDNYSVCIMVKGLCKVGKVEEGKKLVEDRW 230


>gb|EMJ17621.1| hypothetical protein PRUPE_ppa023053mg [Prunus persica]
          Length = 803

 Score =  202 bits (515), Expect = 7e-50
 Identities = 109/234 (46%), Positives = 144/234 (61%)
 Frame = +3

Query: 42  MSKRVLSVIKPRQNPKPSSLQTPSYEPNLRKLAYTVTKILHTHQNWDQILQTHLARESID 221
           MSK +LS IKP  NPKP+SL + S  P++++L     +IL     W+Q L T  +     
Sbjct: 1   MSKTLLSRIKPLHNPKPASLSSSS-PPHIKRLVNDTIQILRADDQWEQSLATQFSETETL 59

Query: 222 ASEIAPLVFDRIRDVELGIKFFDWVLRNKYWSSLDRYGYSSFLKLLARNKAFSEAEDVLN 401
            S++A  V DRI DVELG+KFFDW  +  Y  S D + YSS LKLLAR +  SE E V+ 
Sbjct: 60  VSDVAHFVLDRIHDVELGLKFFDWAFKRPYCCSPDGFAYSSLLKLLARFRVLSEIELVME 119

Query: 402 SLKLEGFLPTREALDDLIRNYSVSGLVDRALEVYKLVIETYNCLPNVLACNALLDVLVKQ 581
            +K E   PT +AL  +IR Y+ SGLVD+ALE Y  V++ Y+C+P+V ACN LL+VLVK 
Sbjct: 120 QMKFEEVKPTIDALSFVIRAYADSGLVDKALEFYCFVVKVYDCVPDVFACNTLLNVLVKN 179

Query: 582 RRIGVALDIYDEMLKRDIGGGDKSMDNYSTCIIVRALCREGKVDKGRKLIEDRW 743
           RR+ VA  +                    TCI+V+ LC+ GKV++GRKLIEDRW
Sbjct: 180 RRVDVARRV--------------------TCIMVKGLCKAGKVEEGRKLIEDRW 213


>ref|XP_003546931.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Glycine max]
          Length = 808

 Score =  201 bits (511), Expect = 2e-49
 Identities = 109/234 (46%), Positives = 148/234 (63%)
 Frame = +3

Query: 42  MSKRVLSVIKPRQNPKPSSLQTPSYEPNLRKLAYTVTKILHTHQNWDQILQTHLARESID 221
           MSK  LS IKPRQ+PK SS    S  P +  L   V +IL THQ W   L++  A   + 
Sbjct: 1   MSKATLSRIKPRQHPKGSS----SLPPRINYLVSDVIRILKTHQ-WQDSLESRFAESKVV 55

Query: 222 ASEIAPLVFDRIRDVELGIKFFDWVLRNKYWSSLDRYGYSSFLKLLARNKAFSEAEDVLN 401
            S++A  V DR+ D EL +KFFDW     +  SLD   +SS LKLLA  + F E E VL 
Sbjct: 56  VSDVAHFVIDRVHDAELALKFFDWASTRPFSCSLDGVAHSSLLKLLASFRVFPEIELVLE 115

Query: 402 SLKLEGFLPTREALDDLIRNYSVSGLVDRALEVYKLVIETYNCLPNVLACNALLDVLVKQ 581
           ++K +   PTREA   LI  Y  SG +DRAL+++  V E +NCLP V+A N+LL+ LVK 
Sbjct: 116 NMKAQHLKPTREAFSALILAYGESGSLDRALQLFHTVREMHNCLPTVVASNSLLNGLVKS 175

Query: 582 RRIGVALDIYDEMLKRDIGGGDKSMDNYSTCIIVRALCREGKVDKGRKLIEDRW 743
            ++ VAL +YD+ML+ D G G   +DNY+T I+V+ LC  GK+++GR+L++DRW
Sbjct: 176 GKVDVALQLYDKMLQTDDGTG-AVVDNYTTSIVVKGLCNLGKIEEGRRLVKDRW 228


>ref|XP_002326537.1| predicted protein [Populus trichocarpa]
           gi|566146735|ref|XP_006368374.1| pentatricopeptide
           repeat-containing family protein [Populus trichocarpa]
           gi|550346285|gb|ERP64943.1| pentatricopeptide
           repeat-containing family protein [Populus trichocarpa]
          Length = 826

 Score =  201 bits (510), Expect = 3e-49
 Identities = 105/231 (45%), Positives = 152/231 (65%), Gaps = 1/231 (0%)
 Frame = +3

Query: 54  VLSVIKPRQNPKPSSLQTPSYEPNLRKLAYTVTKILHTHQNWDQILQTHLARESIDASEI 233
           +LS IKP  +PKP S     + P+++ L   + +IL TH +W++ L+T  +      S I
Sbjct: 7   LLSRIKPLHHPKPISPSPFPFPPHIKILVKDIIQILSTHPHWEKSLETRFSDCETPVSGI 66

Query: 234 APLVFDRIRDVELGIKFFDWVL-RNKYWSSLDRYGYSSFLKLLARNKAFSEAEDVLNSLK 410
           A  VFDRIRD  LG+K F+W   R+ +   LD +  SS LKLLAR + F E E++L ++K
Sbjct: 67  AHFVFDRIRDPGLGLKLFEWASKRSDFNDLLDGFSCSSLLKLLARCRVFVEVENLLETMK 126

Query: 411 LEGFLPTREALDDLIRNYSVSGLVDRALEVYKLVIETYNCLPNVLACNALLDVLVKQRRI 590
            +   PTREAL  ++  Y  SGLV+RALE+Y +  + +N LP+V+ACNALL+ L++Q+++
Sbjct: 127 CKDLAPTREALSFVVGAYVDSGLVNRALELYHIAYDIHNYLPDVIACNALLNALIQQKKV 186

Query: 591 GVALDIYDEMLKRDIGGGDKSMDNYSTCIIVRALCREGKVDKGRKLIEDRW 743
            +A  +Y+EM+KR     D   DNYS CI+VR LC+E KV++GRKLI DRW
Sbjct: 187 EIARKVYEEMVKR-----DGCWDNYSVCIMVRGLCKERKVEEGRKLINDRW 232


>ref|XP_006392899.1| hypothetical protein EUTSA_v10011244mg [Eutrema salsugineum]
           gi|557089477|gb|ESQ30185.1| hypothetical protein
           EUTSA_v10011244mg [Eutrema salsugineum]
          Length = 820

 Score =  199 bits (507), Expect = 6e-49
 Identities = 106/235 (45%), Positives = 151/235 (64%), Gaps = 1/235 (0%)
 Frame = +3

Query: 42  MSKRVLSVIKPRQNPKPSSLQTPSYEPNLRKLAYTVTKILHTHQNWDQILQTHLARESID 221
           MSK +LS IKP  NP PS L      P +RK       IL T QNW ++L      + + 
Sbjct: 1   MSKTLLSRIKPLTNPPPSHLPIT---PKIRKQVSDTVNILKTQQNWSELLDD----DEVR 53

Query: 222 ASEIAPLVFDRIRDVELGIKFFDWVLRNKYWSSLDR-YGYSSFLKLLARNKAFSEAEDVL 398
             +I+P VFDRI+DVE+G+K +DW+   +        +  SSFLKLLAR++ F E ED L
Sbjct: 54  LVDISPYVFDRIQDVEIGVKLYDWLSSQRKEELFSNGFACSSFLKLLARHRIFDEIEDAL 113

Query: 399 NSLKLEGFLPTREALDDLIRNYSVSGLVDRALEVYKLVIETYNCLPNVLACNALLDVLVK 578
            +L+ E    T EAL  ++  Y+ SG++ +++E+Y  V+E+Y  +P+V+ACN+LL +LVK
Sbjct: 114 GNLRKENVKVTHEALSHVLHAYAESGVLSKSVEIYNYVVESYGSVPDVIACNSLLSLLVK 173

Query: 579 QRRIGVALDIYDEMLKRDIGGGDKSMDNYSTCIIVRALCREGKVDKGRKLIEDRW 743
            RR+  A  +YDEM +R  GG    +DNYSTCI+++ +C EGKV++GRKLIEDRW
Sbjct: 174 SRRLEDARKMYDEMCER--GG---CVDNYSTCILLKGMCSEGKVEEGRKLIEDRW 223


>dbj|BAJ53231.1| JHL06P13.11 [Jatropha curcas]
          Length = 826

 Score =  196 bits (498), Expect = 7e-48
 Identities = 106/235 (45%), Positives = 152/235 (64%), Gaps = 1/235 (0%)
 Frame = +3

Query: 42  MSKRVLSVIKPRQNPKPSSLQTPSYEPNLRKLAYTVTKILHTHQNWDQILQTHLARESID 221
           MSK +LS IKP ++PKP+S   PS  P+L+ L     +I+ T   W + L+   +     
Sbjct: 1   MSKSLLSRIKPLRHPKPTSSCIPS-TPHLKYLVKDTIRIIKTETLWQEALEIRFSETDTR 59

Query: 222 ASEIAPLVFDRIRDVELGIKFFDWVLRNKYWS-SLDRYGYSSFLKLLARNKAFSEAEDVL 398
            SEIA  VFD+I D  LG+ FF+W  +    S SLD +  SS LKLLAR + F E E++L
Sbjct: 60  VSEIAHFVFDQIHDPRLGLNFFEWASKQSTLSNSLDGFVCSSLLKLLARFRVFKEIENLL 119

Query: 399 NSLKLEGFLPTREALDDLIRNYSVSGLVDRALEVYKLVIETYNCLPNVLACNALLDVLVK 578
            ++K +  +PT EAL  +I  Y+ SGLV  ALE+Y  VI+ +NC+P+V ACN+LL++LV 
Sbjct: 120 ETMKSKELIPTCEALSFVISAYAGSGLVKEALELYNTVIDVHNCVPDVFACNSLLNLLVH 179

Query: 579 QRRIGVALDIYDEMLKRDIGGGDKSMDNYSTCIIVRALCREGKVDKGRKLIEDRW 743
             ++ +A  +YDEM+ R+   GD  +DNY+ CI+ + LC+EGKV++GR LIE RW
Sbjct: 180 HGKVEIARKVYDEMVDRN---GD--VDNYTVCIVTKGLCKEGKVEEGRHLIEKRW 229


>ref|XP_003542113.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Glycine max]
          Length = 825

 Score =  191 bits (486), Expect = 2e-46
 Identities = 105/236 (44%), Positives = 144/236 (61%), Gaps = 2/236 (0%)
 Frame = +3

Query: 42  MSKRVLSVIKPRQNPKPSSLQTPSYEPNLRKLAYTVTKILHTHQN--WDQILQTHLARES 215
           MSK +LS IKPR  PK SS   P   P +  L   V +IL T +   W   L++  A   
Sbjct: 1   MSKAILSRIKPRHRPKGSSSSLP---PRINHLVSDVIQILRTSKTHQWQDPLESRFAESK 57

Query: 216 IDASEIAPLVFDRIRDVELGIKFFDWVLRNKYWSSLDRYGYSSFLKLLARNKAFSEAEDV 395
           +  S++A  V DR+ D ELG+KFFDW     +  SLD   +SS LKLLA  + F E E V
Sbjct: 58  VVVSDVAHFVIDRVHDAELGLKFFDWASTRPFSCSLDGVAHSSLLKLLASYRVFPEIELV 117

Query: 396 LNSLKLEGFLPTREALDDLIRNYSVSGLVDRALEVYKLVIETYNCLPNVLACNALLDVLV 575
           L ++K +   PTREA   LI  Y+ SG +DRAL+++  V E +NC P  +A N LL+ LV
Sbjct: 118 LENMKAQHLKPTREAFSALILAYAESGSLDRALQLFHTVREMHNCFPTFVASNLLLNGLV 177

Query: 576 KQRRIGVALDIYDEMLKRDIGGGDKSMDNYSTCIIVRALCREGKVDKGRKLIEDRW 743
           K  ++ VAL +YD+ML+ D G G   +DNY+T I+V+ LC  GK+++GR+LI+ RW
Sbjct: 178 KSGKVDVALQLYDKMLQTDDGTG-AVVDNYTTSIMVKGLCNLGKIEEGRRLIKHRW 232


>ref|XP_003597874.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|124359582|gb|ABD28711.2| Tetratricopeptide-like
           helical [Medicago truncatula]
           gi|355486922|gb|AES68125.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 822

 Score =  187 bits (476), Expect = 2e-45
 Identities = 105/238 (44%), Positives = 151/238 (63%), Gaps = 4/238 (1%)
 Frame = +3

Query: 42  MSKRVLSVIKPRQNPKPSSLQTPSYEPNLRKLAYTVTKILHTHQNWDQILQTHLARESID 221
           MSK +LS+IKP  +PKPSS  + S  P+++ L + V +IL T+Q+    LQ+  A   I 
Sbjct: 1   MSKSILSLIKPHHHPKPSS--SSSLPPHIKTLIHDVIQILKTNQSHHS-LQSRFAESQII 57

Query: 222 ASEIAPLVFDRIRDVELGIKFFDWVLRNKYWSSLDRYGYSSFLKLLARNKAFSEAEDVLN 401
            S +A  V DRI + + G+ FF W     + S L+   YSS LKL+ + + FSE E VL 
Sbjct: 58  VSNVAHFVIDRIHNPQHGLYFFHWASTLPFSSPLNNVAYSSLLKLMVKYRLFSEIEIVLE 117

Query: 402 SLKLEGFLPTREALDDLIRNYSVSGLVDRALEVYKLVIETYNCLPNVLACNALLDVLVKQ 581
            +K   F PT EAL+ +I  Y+  G VD+A++++ +V E YNC P V+A N+LL+ LVK 
Sbjct: 118 DMKNRNFKPTLEALNSVICVYAEYGFVDKAVKMFYMVCELYNCFPCVVANNSLLNCLVKN 177

Query: 582 RRIGVALDIYDEMLKRDIGGGDKSM----DNYSTCIIVRALCREGKVDKGRKLIEDRW 743
            ++ VA ++YD+ML+R   GGD  +    DNYS  I+V+ LC  GKV++GRKLI+DRW
Sbjct: 178 GKVDVACELYDKMLER---GGDHGLDLVVDNYSIVIVVKGLCDVGKVEEGRKLIDDRW 232