BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00027236
         (655 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269694.1| PREDICTED: pentatricopeptide repeat-containi...   266   4e-69
gb|EMJ28099.1| hypothetical protein PRUPE_ppa016366mg [Prunus pe...   262   6e-68
gb|EXB69694.1| hypothetical protein L484_002149 [Morus notabilis]     261   1e-67
ref|XP_006290747.1| hypothetical protein CARUB_v10016843mg [Caps...   259   6e-67
gb|EOY01914.1| Pentatricopeptide repeat (PPR) superfamily protei...   258   8e-67
ref|XP_006395744.1| hypothetical protein EUTSA_v10003852mg [Eutr...   254   1e-65
ref|XP_004135453.1| PREDICTED: pentatricopeptide repeat-containi...   254   1e-65
ref|XP_002875182.1| pentatricopeptide repeat-containing protein ...   254   1e-65
gb|AAM77644.1|AF517844_1 hypothetical protein [Arabidopsis thali...   253   5e-65
ref|XP_006438696.1| hypothetical protein CICLE_v10031011mg [Citr...   252   8e-65
ref|NP_178398.1| RNA editing factor OTP85 [Arabidopsis thaliana]...   252   8e-65
ref|XP_003517982.1| PREDICTED: pentatricopeptide repeat-containi...   250   2e-64
gb|ESW29612.1| hypothetical protein PHAVU_002G084700g [Phaseolus...   245   1e-62
ref|XP_004239112.1| PREDICTED: pentatricopeptide repeat-containi...   245   1e-62
ref|XP_006348757.1| PREDICTED: pentatricopeptide repeat-containi...   242   6e-62
ref|XP_004490064.1| PREDICTED: pentatricopeptide repeat-containi...   242   6e-62
ref|XP_004298429.1| PREDICTED: pentatricopeptide repeat-containi...   241   2e-61
ref|XP_002316137.1| pentatricopeptide repeat-containing family p...   240   3e-61
ref|XP_003613787.1| Pentatricopeptide repeat-containing protein ...   200   3e-49
ref|XP_006827256.1| hypothetical protein AMTR_s00010p00262470 [A...   181   1e-43

>ref|XP_002269694.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
           [Vitis vinifera] gi|296086362|emb|CBI31951.3| unnamed
           protein product [Vitis vinifera]
          Length = 595

 Score =  266 bits (680), Expect = 4e-69
 Identities = 124/214 (57%), Positives = 168/214 (78%), Gaps = 1/214 (0%)
 Frame = +1

Query: 16  ITPLIP-TASINPPPPVSLIHKCSSLRELKQIHAFCVKSDLQNDINIVTKLINFCTKEPT 192
           +TP+ P  ++ N   P+SL+ KC+SLRELKQ+ AF +K+ L +D++++TK INFC+  PT
Sbjct: 8   VTPMCPPNSNSNTTHPLSLLPKCTSLRELKQLQAFAIKTHLHSDLSVLTKFINFCSLNPT 67

Query: 193 DSTMEYAHHLFDEIPETDIGLFNSMARGYCRSNCPLHAIELFAQIMCSGVVPDHYTFPCL 372
            ++M++AHHLFD+IP+ DI LFN+MARGY R++ PL A  LF QI+ SG+ PD YTFP L
Sbjct: 68  TTSMQHAHHLFDQIPQPDIVLFNTMARGYARTDTPLRAFTLFTQILFSGLFPDDYTFPSL 127

Query: 373 IKACANVKALEEGRQLQGLAVKLGLDNDIYVSPSLINLYTECDDTILARRVFDSIGNPCV 552
           +KACA+ KALEEGRQL  LA+KLGL  ++YV P+LIN+YT C++   ARRVFD I  PCV
Sbjct: 128 LKACASCKALEEGRQLHCLAIKLGLSENVYVCPTLINMYTACNEMDCARRVFDKIWEPCV 187

Query: 553 VCYNSILSGYARNNMPNEALSLFREMQAGKIRPT 654
           V YN++++GYAR + PNEALSLFRE+QA  ++PT
Sbjct: 188 VTYNAMITGYARGSRPNEALSLFRELQARNLKPT 221



 Score = 89.4 bits (220), Expect = 9e-16
 Identities = 52/191 (27%), Positives = 97/191 (50%)
 Frame = +1

Query: 79  CSSLRELKQIHAFCVKSDLQNDINIVTKLINFCTKEPTDSTMEYAHHLFDEIPETDIGLF 258
           C +L E +Q+H   +K  L  ++ +   LIN  T     + M+ A  +FD+I E  +  +
Sbjct: 134 CKALEEGRQLHCLAIKLGLSENVYVCPTLINMYT---ACNEMDCARRVFDKIWEPCVVTY 190

Query: 259 NSMARGYCRSNCPLHAIELFAQIMCSGVVPDHYTFPCLIKACANVKALEEGRQLQGLAVK 438
           N+M  GY R + P  A+ LF ++    + P   T   ++ +CA + AL+ G+ +     K
Sbjct: 191 NAMITGYARGSRPNEALSLFRELQARNLKPTDVTMLSVLSSCALLGALDLGKWMHEYVKK 250

Query: 439 LGLDNDIYVSPSLINLYTECDDTILARRVFDSIGNPCVVCYNSILSGYARNNMPNEALSL 618
            G +  + V  +LI++Y +C     A  VF+++       +++++  YA +    +A+SL
Sbjct: 251 NGFNRFVKVDTALIDMYAKCGSLDDAVCVFENMAVRDTQAWSAMIMAYAIHGHGLKAVSL 310

Query: 619 FREMQAGKIRP 651
           F+EM+     P
Sbjct: 311 FKEMRKAGTEP 321


>gb|EMJ28099.1| hypothetical protein PRUPE_ppa016366mg [Prunus persica]
          Length = 593

 Score =  262 bits (670), Expect = 6e-68
 Identities = 126/203 (62%), Positives = 159/203 (78%)
 Frame = +1

Query: 46  NPPPPVSLIHKCSSLRELKQIHAFCVKSDLQNDINIVTKLINFCTKEPTDSTMEYAHHLF 225
           N   PVSLI KC+SLRELKQI AF +K+ LQ DI+++TKLINFCT  PT ++M+YAHHLF
Sbjct: 17  NTNTPVSLIPKCTSLRELKQIQAFSIKTHLQYDISVLTKLINFCTLNPTGTSMDYAHHLF 76

Query: 226 DEIPETDIGLFNSMARGYCRSNCPLHAIELFAQIMCSGVVPDHYTFPCLIKACANVKALE 405
           D+IP  DI +FN+MARGY RS+ P  AI LFA I+ S + PD YTF  L+KACA+ KALE
Sbjct: 77  DQIPHPDIVVFNTMARGYARSHAPFRAISLFAHILSSDLFPDDYTFASLLKACASSKALE 136

Query: 406 EGRQLQGLAVKLGLDNDIYVSPSLINLYTECDDTILARRVFDSIGNPCVVCYNSILSGYA 585
           EGRQL   A+K GL  +IYV P+LIN+YTEC+D   ARRVFD I +PCVV +N+++ GYA
Sbjct: 137 EGRQLHCFAIKCGLHLNIYVCPTLINMYTECNDVDAARRVFDKIPDPCVVVHNAMIKGYA 196

Query: 586 RNNMPNEALSLFREMQAGKIRPT 654
           R++ PNEAL+LFRE+QA  ++PT
Sbjct: 197 RSSRPNEALALFRELQASNLKPT 219



 Score =  102 bits (253), Expect = 1e-19
 Identities = 60/199 (30%), Positives = 108/199 (54%), Gaps = 3/199 (1%)
 Frame = +1

Query: 64  SLIHKCSS---LRELKQIHAFCVKSDLQNDINIVTKLINFCTKEPTDSTMEYAHHLFDEI 234
           SL+  C+S   L E +Q+H F +K  L  +I +   LIN  T+    + ++ A  +FD+I
Sbjct: 124 SLLKACASSKALEEGRQLHCFAIKCGLHLNIYVCPTLINMYTE---CNDVDAARRVFDKI 180

Query: 235 PETDIGLFNSMARGYCRSNCPLHAIELFAQIMCSGVVPDHYTFPCLIKACANVKALEEGR 414
           P+  + + N+M +GY RS+ P  A+ LF ++  S + P   T    + +CA + AL+ G+
Sbjct: 181 PDPCVVVHNAMIKGYARSSRPNEALALFRELQASNLKPTDVTMLSALSSCALLGALDLGK 240

Query: 415 QLQGLAVKLGLDNDIYVSPSLINLYTECDDTILARRVFDSIGNPCVVCYNSILSGYARNN 594
            +     K   D  + V+ +LI++Y +C     A  VF+ +       +++++  YA + 
Sbjct: 241 WIHEYVKKNRFDRYVKVNTALIDMYAKCGSLEDAVSVFEDMSVKDTQAWSAMIVAYATHG 300

Query: 595 MPNEALSLFREMQAGKIRP 651
             ++ALS+F EM+  +IRP
Sbjct: 301 NGSKALSMFEEMKKARIRP 319


>gb|EXB69694.1| hypothetical protein L484_002149 [Morus notabilis]
          Length = 594

 Score =  261 bits (668), Expect = 1e-67
 Identities = 123/208 (59%), Positives = 159/208 (76%)
 Frame = +1

Query: 31  PTASINPPPPVSLIHKCSSLRELKQIHAFCVKSDLQNDINIVTKLINFCTKEPTDSTMEY 210
           P    N   P+SL+ KC+SL ELKQI AF +K+ LQNDI++V KLINFCT  PT   M +
Sbjct: 14  PKTQTNSTTPLSLLPKCTSLMELKQIQAFSIKTHLQNDISVVAKLINFCTLSPTPGFMGH 73

Query: 211 AHHLFDEIPETDIGLFNSMARGYCRSNCPLHAIELFAQIMCSGVVPDHYTFPCLIKACAN 390
           A HLFD+IP+ D+ +FN+MARGY RS  PL AI LFAQ + +G++PD YTFP L+KACA+
Sbjct: 74  AQHLFDQIPQPDVIVFNTMARGYARSETPLRAIALFAQTLSNGILPDDYTFPSLLKACAS 133

Query: 391 VKALEEGRQLQGLAVKLGLDNDIYVSPSLINLYTECDDTILARRVFDSIGNPCVVCYNSI 570
            KALEEG+QL  LA+K GL  +IYV P+LIN+YT C+D   ARR FD I  PC+V YN+I
Sbjct: 134 SKALEEGKQLHSLALKHGLGLNIYVCPTLINMYTACNDVHFARRFFDMIDEPCIVMYNAI 193

Query: 571 LSGYARNNMPNEALSLFREMQAGKIRPT 654
           ++GYARN++PNEAL+LFRE+Q  +++PT
Sbjct: 194 ITGYARNSLPNEALALFRELQVTEVKPT 221



 Score = 93.2 bits (230), Expect = 6e-17
 Identities = 57/199 (28%), Positives = 102/199 (51%), Gaps = 3/199 (1%)
 Frame = +1

Query: 64  SLIHKCSS---LRELKQIHAFCVKSDLQNDINIVTKLINFCTKEPTDSTMEYAHHLFDEI 234
           SL+  C+S   L E KQ+H+  +K  L  +I +   LIN  T     + + +A   FD I
Sbjct: 126 SLLKACASSKALEEGKQLHSLALKHGLGLNIYVCPTLINMYT---ACNDVHFARRFFDMI 182

Query: 235 PETDIGLFNSMARGYCRSNCPLHAIELFAQIMCSGVVPDHYTFPCLIKACANVKALEEGR 414
            E  I ++N++  GY R++ P  A+ LF ++  + V P   T   ++  CA + AL+ GR
Sbjct: 183 DEPCIVMYNAIITGYARNSLPNEALALFRELQVTEVKPTDVTMLSVLSCCALLGALDLGR 242

Query: 415 QLQGLAVKLGLDNDIYVSPSLINLYTECDDTILARRVFDSIGNPCVVCYNSILSGYARNN 594
                  K G    + V+ +LI++Y +C     A  VF+++       ++ ++  YA + 
Sbjct: 243 WAHEYVKKNGFGEYVKVNTALIDMYAKCGSLEDAVSVFENMSVKDTQAWSGMIMAYATHG 302

Query: 595 MPNEALSLFREMQAGKIRP 651
             ++A+S+F EM+  + +P
Sbjct: 303 HASKAISIFEEMKKARFKP 321


>ref|XP_006290747.1| hypothetical protein CARUB_v10016843mg [Capsella rubella]
           gi|482559454|gb|EOA23645.1| hypothetical protein
           CARUB_v10016843mg [Capsella rubella]
          Length = 630

 Score =  259 bits (661), Expect = 6e-67
 Identities = 121/204 (59%), Positives = 156/204 (76%)
 Frame = +1

Query: 40  SINPPPPVSLIHKCSSLRELKQIHAFCVKSDLQNDINIVTKLINFCTKEPTDSTMEYAHH 219
           ++NP  P+  I +C SLREL QI  + +KS L  D++ +TKLINFCT+ PT+S+M YA H
Sbjct: 52  TVNPLNPILQISRCKSLRELMQIQGYAIKSHLHEDVSFITKLINFCTESPTESSMSYARH 111

Query: 220 LFDEIPETDIGLFNSMARGYCRSNCPLHAIELFAQIMCSGVVPDHYTFPCLIKACANVKA 399
           LFD + E DI +FNSMARGY RS  PL A  LFA+I+   ++PD+YTFP L+KACA  KA
Sbjct: 112 LFDAMSEPDIVIFNSMARGYSRSTTPLDAFSLFAEILGGDLLPDNYTFPSLLKACAVAKA 171

Query: 400 LEEGRQLQGLAVKLGLDNDIYVSPSLINLYTECDDTILARRVFDSIGNPCVVCYNSILSG 579
           LEEGRQL  L++KLGLD+++YV P+LIN+YTEC+D   AR VFD I  PCVVCYN++++G
Sbjct: 172 LEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITG 231

Query: 580 YARNNMPNEALSLFREMQAGKIRP 651
           YA+ N PNEALSLFREMQ   ++P
Sbjct: 232 YAKRNRPNEALSLFREMQGKSLKP 255



 Score = 78.6 bits (192), Expect = 2e-12
 Identities = 49/200 (24%), Positives = 102/200 (51%), Gaps = 4/200 (2%)
 Frame = +1

Query: 64  SLIHKCS---SLRELKQIHAFCVKSDLQNDINIVTKLINFCTK-EPTDSTMEYAHHLFDE 231
           SL+  C+   +L E +Q+H   +K  L +++ +   LIN  T+ E  DS    A  +FD 
Sbjct: 161 SLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDS----ARCVFDR 216

Query: 232 IPETDIGLFNSMARGYCRSNCPLHAIELFAQIMCSGVVPDHYTFPCLIKACANVKALEEG 411
           I E  +  +N+M  GY + N P  A+ LF ++    + P+  T   ++ +CA + +L+ G
Sbjct: 217 IVEPCVVCYNAMITGYAKRNRPNEALSLFREMQGKSLKPNEITLLSVLSSCALLGSLDLG 276

Query: 412 RQLQGLAVKLGLDNDIYVSPSLINLYTECDDTILARRVFDSIGNPCVVCYNSILSGYARN 591
           + +   A K      + V+ +LI+++ +C     A  +F+ +       +++++  YA +
Sbjct: 277 KWIHEYAKKHEFCKYVKVNTALIDMFAKCGSLDDAVSLFEKMRYKDTQAWSAMIVAYANH 336

Query: 592 NMPNEALSLFREMQAGKIRP 651
               +++ +F  M++  ++P
Sbjct: 337 GKAEQSMLMFDRMRSENVQP 356


>gb|EOY01914.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
           cacao]
          Length = 604

 Score =  258 bits (660), Expect = 8e-67
 Identities = 125/223 (56%), Positives = 170/223 (76%), Gaps = 7/223 (3%)
 Frame = +1

Query: 7   MTTITPLIPTASI------NPPP-PVSLIHKCSSLRELKQIHAFCVKSDLQNDINIVTKL 165
           +T+I P  P   I      NPP  P+SL+ KC+SLRE+KQI AF +K+ LQNDI  +TKL
Sbjct: 8   ITSIPPSKPNGKISTIEPINPPQNPLSLLPKCASLREVKQIQAFAIKTHLQNDITFLTKL 67

Query: 166 INFCTKEPTDSTMEYAHHLFDEIPETDIGLFNSMARGYCRSNCPLHAIELFAQIMCSGVV 345
           INFCTK PT ++MEYAH +FD++ + DI LFN+MARGY RSN P  AI L +Q++  G +
Sbjct: 68  INFCTKNPTFTSMEYAHKVFDKVSQPDIVLFNTMARGYSRSNTPTQAIPLVSQLLSFGFL 127

Query: 346 PDHYTFPCLIKACANVKALEEGRQLQGLAVKLGLDNDIYVSPSLINLYTECDDTILARRV 525
           PD YTFP ++KAC++ KALEEG+Q+  L +KLGL+++IY+ PSLI++YTEC+D   ARRV
Sbjct: 128 PDDYTFPSVLKACSSSKALEEGKQIHCLVIKLGLNHNIYICPSLISMYTECNDLDSARRV 187

Query: 526 FDSIGNPCVVCYNSILSGYARNNMPNEALSLFREMQAGKIRPT 654
           FD + +PCV+ YN+I++GYA+ + PNEALSLFRE+Q   ++PT
Sbjct: 188 FDKMLDPCVISYNAIITGYAKCSRPNEALSLFRELQVKSLKPT 230



 Score = 83.6 bits (205), Expect = 5e-14
 Identities = 53/199 (26%), Positives = 102/199 (51%), Gaps = 3/199 (1%)
 Frame = +1

Query: 64  SLIHKCSS---LRELKQIHAFCVKSDLQNDINIVTKLINFCTKEPTDSTMEYAHHLFDEI 234
           S++  CSS   L E KQIH   +K  L ++I I   LI+  T+    + ++ A  +FD++
Sbjct: 135 SVLKACSSSKALEEGKQIHCLVIKLGLNHNIYICPSLISMYTE---CNDLDSARRVFDKM 191

Query: 235 PETDIGLFNSMARGYCRSNCPLHAIELFAQIMCSGVVPDHYTFPCLIKACANVKALEEGR 414
            +  +  +N++  GY + + P  A+ LF ++    + P   T   ++  CA + AL+ G+
Sbjct: 192 LDPCVISYNAIITGYAKCSRPNEALSLFRELQVKSLKPTDVTMLSVLSCCALLGALDLGK 251

Query: 415 QLQGLAVKLGLDNDIYVSPSLINLYTECDDTILARRVFDSIGNPCVVCYNSILSGYARNN 594
            +     K G D  I VS ++I++Y +C     A  VF++I       +++++  +A + 
Sbjct: 252 WIHEYVNKHGFDKYIKVSTAIIDMYAKCGSLEDAVCVFENITLRDTPAWSAMIVAFATHG 311

Query: 595 MPNEALSLFREMQAGKIRP 651
              +A+  F EM+   ++P
Sbjct: 312 KGYKAIETFEEMRKAGVQP 330


>ref|XP_006395744.1| hypothetical protein EUTSA_v10003852mg [Eutrema salsugineum]
           gi|557092383|gb|ESQ33030.1| hypothetical protein
           EUTSA_v10003852mg [Eutrema salsugineum]
          Length = 605

 Score =  254 bits (650), Expect = 1e-65
 Identities = 123/205 (60%), Positives = 155/205 (75%), Gaps = 1/205 (0%)
 Frame = +1

Query: 40  SINPPPPVSLIHKCSSLRELKQIHAFCVKSDLQNDINIVTKLINFCTKEPTDSTMEYAHH 219
           ++NPP P+ LI +C+SLREL QI  + +KS L  D++ +TKLINFCT+ PT S+M YA  
Sbjct: 26  TVNPPNPILLISRCTSLRELMQIQGYAIKSHLHEDVSFITKLINFCTEYPTTSSMSYARQ 85

Query: 220 LFDEIPETDIGLFNSMARGYCRSNCPLHAIELFAQIMCSG-VVPDHYTFPCLIKACANVK 396
           LFD +PE DI +FNSMARGY RS  PL A  LF +I+    ++PD YTFP L+KACA  K
Sbjct: 86  LFDAMPEPDIVVFNSMARGYSRSTTPLEAFSLFVEILEDDYLLPDGYTFPSLLKACAAAK 145

Query: 397 ALEEGRQLQGLAVKLGLDNDIYVSPSLINLYTECDDTILARRVFDSIGNPCVVCYNSILS 576
           ALEEGRQL  L++KLGLD++IYV P+LIN+YTEC+D   AR VFD I  PCVV YN++++
Sbjct: 146 ALEEGRQLHCLSMKLGLDDNIYVCPTLINMYTECEDVDAARCVFDGIVEPCVVSYNAMIT 205

Query: 577 GYARNNMPNEALSLFREMQAGKIRP 651
           GYAR N PNEALSLFREMQ   ++P
Sbjct: 206 GYARRNRPNEALSLFREMQGKNLKP 230



 Score = 80.1 bits (196), Expect = 5e-13
 Identities = 50/200 (25%), Positives = 103/200 (51%), Gaps = 4/200 (2%)
 Frame = +1

Query: 64  SLIHKCSS---LRELKQIHAFCVKSDLQNDINIVTKLINFCTK-EPTDSTMEYAHHLFDE 231
           SL+  C++   L E +Q+H   +K  L ++I +   LIN  T+ E  D+    A  +FD 
Sbjct: 136 SLLKACAAAKALEEGRQLHCLSMKLGLDDNIYVCPTLINMYTECEDVDA----ARCVFDG 191

Query: 232 IPETDIGLFNSMARGYCRSNCPLHAIELFAQIMCSGVVPDHYTFPCLIKACANVKALEEG 411
           I E  +  +N+M  GY R N P  A+ LF ++    + P+  T   ++ +C+ + +L+ G
Sbjct: 192 IVEPCVVSYNAMITGYARRNRPNEALSLFREMQGKNLKPNEVTLLSVLSSCSLLGSLDLG 251

Query: 412 RQLQGLAVKLGLDNDIYVSPSLINLYTECDDTILARRVFDSIGNPCVVCYNSILSGYARN 591
           + +   A K G    + V  +LI+++ +C     A  +F+ + +     +++++  YA +
Sbjct: 252 KWIHEYAKKHGFCKYVKVITALIDMFAKCGSLDDAVSLFERMRHKDTQAWSAMIVAYANH 311

Query: 592 NMPNEALSLFREMQAGKIRP 651
               +++ +F  M++  ++P
Sbjct: 312 GQAEKSMLMFERMRSENVQP 331


>ref|XP_004135453.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g02980-like [Cucumis sativus]
           gi|449478665|ref|XP_004155385.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g02980-like [Cucumis sativus]
          Length = 604

 Score =  254 bits (650), Expect = 1e-65
 Identities = 121/204 (59%), Positives = 158/204 (77%)
 Frame = +1

Query: 43  INPPPPVSLIHKCSSLRELKQIHAFCVKSDLQNDINIVTKLINFCTKEPTDSTMEYAHHL 222
           IN   P+SL+ KC+SL ELKQI A+ +K++LQ+DI+++TKLINFCT  PT S M++AHHL
Sbjct: 27  INQLHPLSLLSKCTSLNELKQIQAYTIKTNLQSDISVLTKLINFCTLNPTTSYMDHAHHL 86

Query: 223 FDEIPETDIGLFNSMARGYCRSNCPLHAIELFAQIMCSGVVPDHYTFPCLIKACANVKAL 402
           FD+I + DI LFN MARGY RSN P  A  LF +++CSG++PD YTF  L+KACA+ KAL
Sbjct: 87  FDQILDKDIILFNIMARGYARSNSPYLAFSLFGELLCSGLLPDDYTFSSLLKACASSKAL 146

Query: 403 EEGRQLQGLAVKLGLDNDIYVSPSLINLYTECDDTILARRVFDSIGNPCVVCYNSILSGY 582
            EG  L   AVKLGL+++IY+ P+LIN+Y EC+D   AR VFD +  PC+V YN+I++GY
Sbjct: 147 REGMGLHCFAVKLGLNHNIYICPTLINMYAECNDMNAARGVFDEMEQPCIVSYNAIITGY 206

Query: 583 ARNNMPNEALSLFREMQAGKIRPT 654
           AR++ PNEALSLFRE+QA  I PT
Sbjct: 207 ARSSQPNEALSLFRELQASNIEPT 230



 Score = 92.0 bits (227), Expect = 1e-16
 Identities = 56/199 (28%), Positives = 105/199 (52%), Gaps = 3/199 (1%)
 Frame = +1

Query: 64  SLIHKCSSLRELKQ---IHAFCVKSDLQNDINIVTKLINFCTKEPTDSTMEYAHHLFDEI 234
           SL+  C+S + L++   +H F VK  L ++I I   LIN   +    + M  A  +FDE+
Sbjct: 135 SLLKACASSKALREGMGLHCFAVKLGLNHNIYICPTLINMYAE---CNDMNAARGVFDEM 191

Query: 235 PETDIGLFNSMARGYCRSNCPLHAIELFAQIMCSGVVPDHYTFPCLIKACANVKALEEGR 414
            +  I  +N++  GY RS+ P  A+ LF ++  S + P   T   +I +CA + AL+ G+
Sbjct: 192 EQPCIVSYNAIITGYARSSQPNEALSLFRELQASNIEPTDVTMLSVIMSCALLGALDLGK 251

Query: 415 QLQGLAVKLGLDNDIYVSPSLINLYTECDDTILARRVFDSIGNPCVVCYNSILSGYARNN 594
            +     K G D  + V+ +LI+++ +C     A  +F+ +       +++++  +A + 
Sbjct: 252 WIHEYVKKKGFDKYVKVNTALIDMFAKCGSLTDAISIFEGMRVRDTQAWSAMIVAFATHG 311

Query: 595 MPNEALSLFREMQAGKIRP 651
              +A+S+F EM+   +RP
Sbjct: 312 DGLKAISMFEEMKREGVRP 330


>ref|XP_002875182.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297321020|gb|EFH51441.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 605

 Score =  254 bits (650), Expect = 1e-65
 Identities = 123/208 (59%), Positives = 157/208 (75%)
 Frame = +1

Query: 28  IPTASINPPPPVSLIHKCSSLRELKQIHAFCVKSDLQNDINIVTKLINFCTKEPTDSTME 207
           I T + NPP P+ LI KC+S REL QI A+ +KS  Q D++  TKLINFCT+ PT+S+M 
Sbjct: 24  IDTVNPNPPNPILLISKCNSERELMQIQAYAIKSH-QEDVSFNTKLINFCTESPTESSMS 82

Query: 208 YAHHLFDEIPETDIGLFNSMARGYCRSNCPLHAIELFAQIMCSGVVPDHYTFPCLIKACA 387
           YA HLFD + E DI +FNS+ARGY RS  PL    LF +I+   ++PD+YTFP L+KACA
Sbjct: 83  YARHLFDAMSEPDIVIFNSIARGYSRSTNPLEVFNLFVEILEDDLLPDNYTFPSLLKACA 142

Query: 388 NVKALEEGRQLQGLAVKLGLDNDIYVSPSLINLYTECDDTILARRVFDSIGNPCVVCYNS 567
             KALEEGRQL  L++KLG+D+++YV P+LIN+YTEC+D   AR VFD I  PCVVCYN+
Sbjct: 143 VAKALEEGRQLHCLSMKLGVDDNVYVCPTLINMYTECEDVDAARCVFDRIVEPCVVCYNA 202

Query: 568 ILSGYARNNMPNEALSLFREMQAGKIRP 651
           +++GYAR N PNEALSLFREMQ   ++P
Sbjct: 203 MITGYARRNRPNEALSLFREMQGKNLKP 230



 Score = 82.0 bits (201), Expect = 1e-13
 Identities = 49/200 (24%), Positives = 103/200 (51%), Gaps = 4/200 (2%)
 Frame = +1

Query: 64  SLIHKCS---SLRELKQIHAFCVKSDLQNDINIVTKLINFCTK-EPTDSTMEYAHHLFDE 231
           SL+  C+   +L E +Q+H   +K  + +++ +   LIN  T+ E  D+    A  +FD 
Sbjct: 136 SLLKACAVAKALEEGRQLHCLSMKLGVDDNVYVCPTLINMYTECEDVDA----ARCVFDR 191

Query: 232 IPETDIGLFNSMARGYCRSNCPLHAIELFAQIMCSGVVPDHYTFPCLIKACANVKALEEG 411
           I E  +  +N+M  GY R N P  A+ LF ++    + P+  T   ++ +CA + +L+ G
Sbjct: 192 IVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKNLKPNEITLLSVLSSCALLGSLDLG 251

Query: 412 RQLQGLAVKLGLDNDIYVSPSLINLYTECDDTILARRVFDSIGNPCVVCYNSILSGYARN 591
           + +   A K G    + V+ +LI+++ +C     A  +F+++       +++++  YA +
Sbjct: 252 KWIHEYAKKHGFCKYVKVNTALIDMFAKCGSLDDAVSIFENMRYKDTQAWSAMIVAYANH 311

Query: 592 NMPNEALSLFREMQAGKIRP 651
                ++ +F  M++  ++P
Sbjct: 312 GQAENSMLMFERMRSENVQP 331


>gb|AAM77644.1|AF517844_1 hypothetical protein [Arabidopsis thaliana]
          Length = 603

 Score =  253 bits (645), Expect = 5e-65
 Identities = 120/204 (58%), Positives = 156/204 (76%)
 Frame = +1

Query: 40  SINPPPPVSLIHKCSSLRELKQIHAFCVKSDLQNDINIVTKLINFCTKEPTDSTMEYAHH 219
           ++N   P+ LI KC+SLREL QI A+ +KS ++ D++ V KLINFCT+ PT+S+M YA H
Sbjct: 26  TVNTQNPILLISKCNSLRELMQIQAYAIKSHIE-DVSFVAKLINFCTESPTESSMSYARH 84

Query: 220 LFDEIPETDIGLFNSMARGYCRSNCPLHAIELFAQIMCSGVVPDHYTFPCLIKACANVKA 399
           LF+ + E DI +FNSMARGY R   PL    LF +I+  G++PD+YTFP L+KACA  KA
Sbjct: 85  LFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKA 144

Query: 400 LEEGRQLQGLAVKLGLDNDIYVSPSLINLYTECDDTILARRVFDSIGNPCVVCYNSILSG 579
           LEEGRQL  L++KLGLD+++YV P+LIN+YTEC+D   AR VFD I  PCVVCYN++++G
Sbjct: 145 LEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARXVFDRIVEPCVVCYNAMITG 204

Query: 580 YARNNMPNEALSLFREMQAGKIRP 651
           YAR N PNEALSLFREMQ   ++P
Sbjct: 205 YARRNRPNEALSLFREMQGKYLKP 228



 Score = 81.3 bits (199), Expect = 2e-13
 Identities = 50/200 (25%), Positives = 102/200 (51%), Gaps = 4/200 (2%)
 Frame = +1

Query: 64  SLIHKCS---SLRELKQIHAFCVKSDLQNDINIVTKLINFCTK-EPTDSTMEYAHHLFDE 231
           SL+  C+   +L E +Q+H   +K  L +++ +   LIN  T+ E  DS    A  +FD 
Sbjct: 134 SLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDS----ARXVFDR 189

Query: 232 IPETDIGLFNSMARGYCRSNCPLHAIELFAQIMCSGVVPDHYTFPCLIKACANVKALEEG 411
           I E  +  +N+M  GY R N P  A+ LF ++    + P+  T   ++ +CA + +L+ G
Sbjct: 190 IVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLG 249

Query: 412 RQLQGLAVKLGLDNDIYVSPSLINLYTECDDTILARRVFDSIGNPCVVCYNSILSGYARN 591
           + +   A K      + V+ +LI+++ +C     A  +F+ +       +++++  YA +
Sbjct: 250 KWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANH 309

Query: 592 NMPNEALSLFREMQAGKIRP 651
               +++ +F  M++  ++P
Sbjct: 310 GKAEKSMLMFERMRSENVQP 329


>ref|XP_006438696.1| hypothetical protein CICLE_v10031011mg [Citrus clementina]
           gi|568859243|ref|XP_006483151.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g02980-like [Citrus sinensis]
           gi|557540892|gb|ESR51936.1| hypothetical protein
           CICLE_v10031011mg [Citrus clementina]
          Length = 598

 Score =  252 bits (643), Expect = 8e-65
 Identities = 121/210 (57%), Positives = 161/210 (76%), Gaps = 2/210 (0%)
 Frame = +1

Query: 31  PTASINPPPPVSLIHKCSSLRELKQIHAFCVKSDLQNDINIVTKLINFCTKEPTDSTMEY 210
           P    N P  +SL+ +C+S R LKQIHA  +K+ LQND+N++TKLINFCT+ PT S+ME+
Sbjct: 15  PKLCTNTPNALSLLPRCTSFRGLKQIHAVTIKTHLQNDLNVLTKLINFCTQNPTTSSMEH 74

Query: 211 AHHLFDEIPETDIGLFNSMARGYCRSNCPLHAIELFAQIMCSGVVPDHYTFPCLIKACAN 390
           AH LFD IPE DI LFN+MARGY RS  P+ AI LF +++ SG++PD Y+FP L+KACA 
Sbjct: 75  AHLLFDRIPEPDIVLFNTMARGYSRSKTPIRAIFLFVELLNSGLLPDDYSFPSLLKACAC 134

Query: 391 V--KALEEGRQLQGLAVKLGLDNDIYVSPSLINLYTECDDTILARRVFDSIGNPCVVCYN 564
           V  +ALEEG+QL   A+KLGL++++YV  +LINLY EC D   ARR+F++I  PCVV YN
Sbjct: 135 VGAEALEEGKQLHCFAIKLGLNSNLYVCTTLINLYAECSDVEAARRIFENISEPCVVSYN 194

Query: 565 SILSGYARNNMPNEALSLFREMQAGKIRPT 654
           +I++ YAR++ PNEALSLFRE+Q   ++PT
Sbjct: 195 AIITAYARSSRPNEALSLFRELQERNLKPT 224



 Score = 90.5 bits (223), Expect = 4e-16
 Identities = 53/201 (26%), Positives = 104/201 (51%), Gaps = 5/201 (2%)
 Frame = +1

Query: 64  SLIHKCS-----SLRELKQIHAFCVKSDLQNDINIVTKLINFCTKEPTDSTMEYAHHLFD 228
           SL+  C+     +L E KQ+H F +K  L +++ + T LIN   +    S +E A  +F+
Sbjct: 127 SLLKACACVGAEALEEGKQLHCFAIKLGLNSNLYVCTTLINLYAE---CSDVEAARRIFE 183

Query: 229 EIPETDIGLFNSMARGYCRSNCPLHAIELFAQIMCSGVVPDHYTFPCLIKACANVKALEE 408
            I E  +  +N++   Y RS+ P  A+ LF ++    + P   T    + +CA + +L+ 
Sbjct: 184 NISEPCVVSYNAIITAYARSSRPNEALSLFRELQERNLKPTDVTMLSALSSCALLGSLDL 243

Query: 409 GRQLQGLAVKLGLDNDIYVSPSLINLYTECDDTILARRVFDSIGNPCVVCYNSILSGYAR 588
           G+ +     K GLD  + V+ +LI+++ +C     A  VFD++       +++++  YA 
Sbjct: 244 GKWIHEYIKKYGLDKYVKVNTALIDMHAKCGRLDDAVSVFDNMSGKDTQAWSAMIVAYAT 303

Query: 589 NNMPNEALSLFREMQAGKIRP 651
           +   ++++ +F EM   ++ P
Sbjct: 304 HGQGHKSILMFEEMMKAQVSP 324


>ref|NP_178398.1| RNA editing factor OTP85 [Arabidopsis thaliana]
           gi|218546779|sp|Q8LK93.2|PP145_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g02980 gi|3461822|gb|AAC32916.1| hypothetical protein
           [Arabidopsis thaliana] gi|330250557|gb|AEC05651.1| RNA
           editing factor OTP85 [Arabidopsis thaliana]
          Length = 603

 Score =  252 bits (643), Expect = 8e-65
 Identities = 120/204 (58%), Positives = 156/204 (76%)
 Frame = +1

Query: 40  SINPPPPVSLIHKCSSLRELKQIHAFCVKSDLQNDINIVTKLINFCTKEPTDSTMEYAHH 219
           ++N   P+ LI KC+SLREL QI A+ +KS ++ D++ V KLINFCT+ PT+S+M YA H
Sbjct: 26  TVNTQNPILLISKCNSLRELMQIQAYAIKSHIE-DVSFVAKLINFCTESPTESSMSYARH 84

Query: 220 LFDEIPETDIGLFNSMARGYCRSNCPLHAIELFAQIMCSGVVPDHYTFPCLIKACANVKA 399
           LF+ + E DI +FNSMARGY R   PL    LF +I+  G++PD+YTFP L+KACA  KA
Sbjct: 85  LFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKA 144

Query: 400 LEEGRQLQGLAVKLGLDNDIYVSPSLINLYTECDDTILARRVFDSIGNPCVVCYNSILSG 579
           LEEGRQL  L++KLGLD+++YV P+LIN+YTEC+D   AR VFD I  PCVVCYN++++G
Sbjct: 145 LEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITG 204

Query: 580 YARNNMPNEALSLFREMQAGKIRP 651
           YAR N PNEALSLFREMQ   ++P
Sbjct: 205 YARRNRPNEALSLFREMQGKYLKP 228



 Score = 80.5 bits (197), Expect = 4e-13
 Identities = 50/200 (25%), Positives = 102/200 (51%), Gaps = 4/200 (2%)
 Frame = +1

Query: 64  SLIHKCS---SLRELKQIHAFCVKSDLQNDINIVTKLINFCTK-EPTDSTMEYAHHLFDE 231
           SL+  C+   +L E +Q+H   +K  L +++ +   LIN  T+ E  DS    A  +FD 
Sbjct: 134 SLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDS----ARCVFDR 189

Query: 232 IPETDIGLFNSMARGYCRSNCPLHAIELFAQIMCSGVVPDHYTFPCLIKACANVKALEEG 411
           I E  +  +N+M  GY R N P  A+ LF ++    + P+  T   ++ +CA + +L+ G
Sbjct: 190 IVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLG 249

Query: 412 RQLQGLAVKLGLDNDIYVSPSLINLYTECDDTILARRVFDSIGNPCVVCYNSILSGYARN 591
           + +   A K      + V+ +LI+++ +C     A  +F+ +       +++++  YA +
Sbjct: 250 KWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANH 309

Query: 592 NMPNEALSLFREMQAGKIRP 651
               +++ +F  M++  ++P
Sbjct: 310 GKAEKSMLMFERMRSENVQP 329


>ref|XP_003517982.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g02980-like [Glycine max]
          Length = 609

 Score =  250 bits (639), Expect = 2e-64
 Identities = 122/209 (58%), Positives = 164/209 (78%), Gaps = 2/209 (0%)
 Frame = +1

Query: 34  TASINPPPP--VSLIHKCSSLRELKQIHAFCVKSDLQNDINIVTKLINFCTKEPTDSTME 207
           TA++ PP    +SLI KC+SLRELKQI A+ +K+  QN+  ++TKLINFCT  PT ++M+
Sbjct: 28  TAALEPPSSSILSLIPKCTSLRELKQIQAYTIKTH-QNNPTVLTKLINFCTSNPTIASMD 86

Query: 208 YAHHLFDEIPETDIGLFNSMARGYCRSNCPLHAIELFAQIMCSGVVPDHYTFPCLIKACA 387
           +AH +FD+IP+ DI LFN+MARGY R + PL AI L +Q++CSG++PD YTF  L+KACA
Sbjct: 87  HAHRMFDKIPQPDIVLFNTMARGYARFDDPLRAILLCSQVLCSGLLPDDYTFSSLLKACA 146

Query: 388 NVKALEEGRQLQGLAVKLGLDNDIYVSPSLINLYTECDDTILARRVFDSIGNPCVVCYNS 567
            +KALEEG+QL  LAVKLG+ +++YV P+LIN+YT C+D   ARRVFD IG PCVV YN+
Sbjct: 147 RLKALEEGKQLHCLAVKLGVGDNMYVCPTLINMYTACNDVDAARRVFDKIGEPCVVAYNA 206

Query: 568 ILSGYARNNMPNEALSLFREMQAGKIRPT 654
           I++  ARN+ PNEAL+LFRE+Q   ++PT
Sbjct: 207 IITSCARNSRPNEALALFRELQESGLKPT 235



 Score = 89.7 bits (221), Expect = 7e-16
 Identities = 55/199 (27%), Positives = 104/199 (52%), Gaps = 3/199 (1%)
 Frame = +1

Query: 64  SLIHKCSSLREL---KQIHAFCVKSDLQNDINIVTKLINFCTKEPTDSTMEYAHHLFDEI 234
           SL+  C+ L+ L   KQ+H   VK  + +++ +   LIN  T     + ++ A  +FD+I
Sbjct: 140 SLLKACARLKALEEGKQLHCLAVKLGVGDNMYVCPTLINMYT---ACNDVDAARRVFDKI 196

Query: 235 PETDIGLFNSMARGYCRSNCPLHAIELFAQIMCSGVVPDHYTFPCLIKACANVKALEEGR 414
            E  +  +N++     R++ P  A+ LF ++  SG+ P   T    + +CA + AL+ GR
Sbjct: 197 GEPCVVAYNAIITSCARNSRPNEALALFRELQESGLKPTDVTMLVALSSCALLGALDLGR 256

Query: 415 QLQGLAVKLGLDNDIYVSPSLINLYTECDDTILARRVFDSIGNPCVVCYNSILSGYARNN 594
            +     K G D  + V+ +LI++Y +C     A  VF  +       +++++  YA + 
Sbjct: 257 WIHEYVKKNGFDQYVKVNTALIDMYAKCGSLDDAVSVFKDMPRRDTQAWSAMIVAYATHG 316

Query: 595 MPNEALSLFREMQAGKIRP 651
             ++A+S+ REM+  K++P
Sbjct: 317 HGSQAISMLREMKKAKVQP 335


>gb|ESW29612.1| hypothetical protein PHAVU_002G084700g [Phaseolus vulgaris]
          Length = 600

 Score =  245 bits (625), Expect = 1e-62
 Identities = 120/216 (55%), Positives = 161/216 (74%)
 Frame = +1

Query: 7   MTTITPLIPTASINPPPPVSLIHKCSSLRELKQIHAFCVKSDLQNDINIVTKLINFCTKE 186
           + T   L P+ S+     +SLI KC+SLRELKQI A+ +K+ L N   ++TKLINFCT  
Sbjct: 16  LNTEVELEPSTSL-----LSLIPKCTSLRELKQIQAYTIKTHLHNSGTVLTKLINFCTCN 70

Query: 187 PTDSTMEYAHHLFDEIPETDIGLFNSMARGYCRSNCPLHAIELFAQIMCSGVVPDHYTFP 366
           PT ++M+YAH +FD+IP+ DI LFN+MARGY R + PL AI LF+Q++ SG++PD YTF 
Sbjct: 71  PTTASMDYAHQMFDQIPQPDIVLFNTMARGYARFDDPLRAILLFSQVLFSGLLPDDYTFS 130

Query: 367 CLIKACANVKALEEGRQLQGLAVKLGLDNDIYVSPSLINLYTECDDTILARRVFDSIGNP 546
            L KACA +KA++EG+QL  LAVKLG+  ++YV P+LIN+YT C+D   ARRVFD I  P
Sbjct: 131 SLFKACARLKAIQEGKQLHCLAVKLGVSGNMYVCPTLINMYTACNDMDAARRVFDKIDEP 190

Query: 547 CVVCYNSILSGYARNNMPNEALSLFREMQAGKIRPT 654
           CVV YN+I+S  AR++ PNEAL+LFRE+Q   ++PT
Sbjct: 191 CVVAYNAIISSCARSSQPNEALALFRELQESGLKPT 226



 Score = 89.4 bits (220), Expect = 9e-16
 Identities = 56/199 (28%), Positives = 101/199 (50%), Gaps = 3/199 (1%)
 Frame = +1

Query: 64  SLIHKCSSLREL---KQIHAFCVKSDLQNDINIVTKLINFCTKEPTDSTMEYAHHLFDEI 234
           SL   C+ L+ +   KQ+H   VK  +  ++ +   LIN  T     + M+ A  +FD+I
Sbjct: 131 SLFKACARLKAIQEGKQLHCLAVKLGVSGNMYVCPTLINMYT---ACNDMDAARRVFDKI 187

Query: 235 PETDIGLFNSMARGYCRSNCPLHAIELFAQIMCSGVVPDHYTFPCLIKACANVKALEEGR 414
            E  +  +N++     RS+ P  A+ LF ++  SG+ P   T    + +CA + AL+ G+
Sbjct: 188 DEPCVVAYNAIISSCARSSQPNEALALFRELQESGLKPTDVTMLVALSSCALLGALDLGK 247

Query: 415 QLQGLAVKLGLDNDIYVSPSLINLYTECDDTILARRVFDSIGNPCVVCYNSILSGYARNN 594
            +     K G D  + V+ +LI++Y +C     A  VF  +       +++++ GYA + 
Sbjct: 248 WIHEYVKKNGFDKYVKVNTALIDMYAKCGSLEDAVSVFREMPRRDTQAWSAMIVGYATHG 307

Query: 595 MPNEALSLFREMQAGKIRP 651
              +ALS+  EM+  K++P
Sbjct: 308 HGYQALSMLEEMKKEKVQP 326


>ref|XP_004239112.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g02980-like [Solanum lycopersicum]
          Length = 605

 Score =  245 bits (625), Expect = 1e-62
 Identities = 119/205 (58%), Positives = 153/205 (74%)
 Frame = +1

Query: 40  SINPPPPVSLIHKCSSLRELKQIHAFCVKSDLQNDINIVTKLINFCTKEPTDSTMEYAHH 219
           +  P  P++L+ KC SLR+LKQI AF +K+ LQNDI  ++KLINFCTK PT + M +AH 
Sbjct: 27  TFTPIDPLALVPKCKSLRDLKQIQAFSIKTQLQNDIFFMSKLINFCTKNPTPACMYHAHL 86

Query: 220 LFDEIPETDIGLFNSMARGYCRSNCPLHAIELFAQIMCSGVVPDHYTFPCLIKACANVKA 399
           LFD+IP+ DI LFN +ARGY  S+ PL+A  LF +I+  GVVPD YTFP L+KACA  +A
Sbjct: 87  LFDKIPQPDIVLFNFLARGYAHSDTPLNAFVLFLKILTLGVVPDFYTFPSLLKACAGAEA 146

Query: 400 LEEGRQLQGLAVKLGLDNDIYVSPSLINLYTECDDTILARRVFDSIGNPCVVCYNSILSG 579
           LEEG+QL  L +K GL+ D+YV P+L+N+Y E  D   ARRVFD I +PCVV YN+I+ G
Sbjct: 147 LEEGKQLHCLLIKYGLNGDMYVCPALMNMYIEFKDNDSARRVFDRIADPCVVTYNAIIIG 206

Query: 580 YARNNMPNEALSLFREMQAGKIRPT 654
           Y R++ PNEAL LFRE+Q  KI+PT
Sbjct: 207 YVRSSEPNEALLLFRELQVKKIKPT 231



 Score = 82.8 bits (203), Expect = 8e-14
 Identities = 53/199 (26%), Positives = 99/199 (49%), Gaps = 3/199 (1%)
 Frame = +1

Query: 64  SLIHKCS---SLRELKQIHAFCVKSDLQNDINIVTKLINFCTKEPTDSTMEYAHHLFDEI 234
           SL+  C+   +L E KQ+H   +K  L  D+ +   L+N   +   + +   A  +FD I
Sbjct: 136 SLLKACAGAEALEEGKQLHCLLIKYGLNGDMYVCPALMNMYIEFKDNDS---ARRVFDRI 192

Query: 235 PETDIGLFNSMARGYCRSNCPLHAIELFAQIMCSGVVPDHYTFPCLIKACANVKALEEGR 414
            +  +  +N++  GY RS+ P  A+ LF ++    + P   T   ++ +CA +  L  G+
Sbjct: 193 ADPCVVTYNAIIIGYVRSSEPNEALLLFRELQVKKIKPTDVTILGVVSSCALLGTLGFGK 252

Query: 415 QLQGLAVKLGLDNDIYVSPSLINLYTECDDTILARRVFDSIGNPCVVCYNSILSGYARNN 594
            +     K   D  + V+ +LI++Y +C     A  VF+S+       +++++  YA + 
Sbjct: 253 WVHEYIKKNSFDQYVKVNTALIDMYAKCGSLADAISVFESMPYRDTQAWSAMIMAYAIHG 312

Query: 595 MPNEALSLFREMQAGKIRP 651
               A++LF+EMQ  K+ P
Sbjct: 313 RARCAITLFQEMQNTKVNP 331


>ref|XP_006348757.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g02980-like [Solanum tuberosum]
          Length = 605

 Score =  242 bits (618), Expect = 6e-62
 Identities = 116/205 (56%), Positives = 153/205 (74%)
 Frame = +1

Query: 40  SINPPPPVSLIHKCSSLRELKQIHAFCVKSDLQNDINIVTKLINFCTKEPTDSTMEYAHH 219
           +  P  P++L+ KC SLR+LKQI AF +K+ +QNDI  ++KLINFCTK PT + M +AH 
Sbjct: 27  TFTPIDPLALVPKCKSLRDLKQIQAFSIKTQMQNDIFFMSKLINFCTKNPTPAFMYHAHL 86

Query: 220 LFDEIPETDIGLFNSMARGYCRSNCPLHAIELFAQIMCSGVVPDHYTFPCLIKACANVKA 399
           LFD+IP+ +I LFN +A GY RS+ PL+A  LF +I+  GVVPD YTFP L+KACA  +A
Sbjct: 87  LFDKIPQPNIVLFNFLAHGYARSDTPLNAFVLFLKILTLGVVPDFYTFPSLLKACAGAEA 146

Query: 400 LEEGRQLQGLAVKLGLDNDIYVSPSLINLYTECDDTILARRVFDSIGNPCVVCYNSILSG 579
           LEEG+QL  L +K GL  D+YV P+L+N+Y EC D   ARRVFD I +PCVV YN+I+ G
Sbjct: 147 LEEGKQLHCLLIKYGLKGDMYVCPALMNMYIECKDNGSARRVFDRIADPCVVTYNAIIMG 206

Query: 580 YARNNMPNEALSLFREMQAGKIRPT 654
           Y R++ PN+AL LFRE+Q  KI+P+
Sbjct: 207 YVRSSEPNKALLLFRELQVKKIKPS 231



 Score = 87.8 bits (216), Expect = 3e-15
 Identities = 54/199 (27%), Positives = 102/199 (51%), Gaps = 3/199 (1%)
 Frame = +1

Query: 64  SLIHKCS---SLRELKQIHAFCVKSDLQNDINIVTKLINFCTKEPTDSTMEYAHHLFDEI 234
           SL+  C+   +L E KQ+H   +K  L+ D+ +   L+N   +   + +   A  +FD I
Sbjct: 136 SLLKACAGAEALEEGKQLHCLLIKYGLKGDMYVCPALMNMYIECKDNGS---ARRVFDRI 192

Query: 235 PETDIGLFNSMARGYCRSNCPLHAIELFAQIMCSGVVPDHYTFPCLIKACANVKALEEGR 414
            +  +  +N++  GY RS+ P  A+ LF ++    + P   T   ++ +CA +  L  G+
Sbjct: 193 ADPCVVTYNAIIMGYVRSSEPNKALLLFRELQVKKIKPSDVTILGVVSSCALLGTLGFGK 252

Query: 415 QLQGLAVKLGLDNDIYVSPSLINLYTECDDTILARRVFDSIGNPCVVCYNSILSGYARNN 594
            +     K G D  + V+ +LI++Y +C     A  VF+S+ N     +++++  YA + 
Sbjct: 253 WVHEYVKKNGFDQYVKVNTALIDMYAKCGSLADAISVFESMRNRDTQAWSAMIMAYAIHG 312

Query: 595 MPNEALSLFREMQAGKIRP 651
               A++LF+EMQ  ++ P
Sbjct: 313 RARCAITLFQEMQNTQVNP 331


>ref|XP_004490064.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g02980-like [Cicer arietinum]
          Length = 602

 Score =  242 bits (618), Expect = 6e-62
 Identities = 118/217 (54%), Positives = 156/217 (71%)
 Frame = +1

Query: 4   NMTTITPLIPTASINPPPPVSLIHKCSSLRELKQIHAFCVKSDLQNDINIVTKLINFCTK 183
           N  T T L+P      P  +S I KC++L+ELKQI A+ +K+   N+ N +TKLINFCT 
Sbjct: 17  NTETTTTLLPL-----PHLLSFIPKCTTLKELKQIQAYTIKTHQHNNTNFITKLINFCTS 71

Query: 184 EPTDSTMEYAHHLFDEIPETDIGLFNSMARGYCRSNCPLHAIELFAQIMCSGVVPDHYTF 363
           +PT ++M+YAH LFD+I   DI LFNSMARGY R N PL AI LF+ ++C+G++PD YTF
Sbjct: 72  KPTTASMDYAHQLFDKITLPDIVLFNSMARGYARFNDPLRAIILFSHVLCNGLLPDDYTF 131

Query: 364 PCLIKACANVKALEEGRQLQGLAVKLGLDNDIYVSPSLINLYTECDDTILARRVFDSIGN 543
             L+K C+ VKALEEG+QL   A+KLG+ N++YV P+LIN+YT C D   ARRVFD I  
Sbjct: 132 SSLLKVCSKVKALEEGKQLHCFALKLGVGNNMYVVPTLINMYTSCGDIDAARRVFDKIDE 191

Query: 544 PCVVCYNSILSGYARNNMPNEALSLFREMQAGKIRPT 654
           PCVV YN+I+   ARN+ PNEAL+LFR++Q   ++ T
Sbjct: 192 PCVVAYNAIIMSLARNSQPNEALALFRDLQESGLKAT 228



 Score = 88.2 bits (217), Expect = 2e-15
 Identities = 54/199 (27%), Positives = 104/199 (52%), Gaps = 3/199 (1%)
 Frame = +1

Query: 64  SLIHKCSSLREL---KQIHAFCVKSDLQNDINIVTKLINFCTKEPTDSTMEYAHHLFDEI 234
           SL+  CS ++ L   KQ+H F +K  + N++ +V  LIN  T   +   ++ A  +FD+I
Sbjct: 133 SLLKVCSKVKALEEGKQLHCFALKLGVGNNMYVVPTLINMYT---SCGDIDAARRVFDKI 189

Query: 235 PETDIGLFNSMARGYCRSNCPLHAIELFAQIMCSGVVPDHYTFPCLIKACANVKALEEGR 414
            E  +  +N++     R++ P  A+ LF  +  SG+     T   ++ +CA + +L+ GR
Sbjct: 190 DEPCVVAYNAIIMSLARNSQPNEALALFRDLQESGLKATDVTMLVVLSSCALLGSLDLGR 249

Query: 415 QLQGLAVKLGLDNDIYVSPSLINLYTECDDTILARRVFDSIGNPCVVCYNSILSGYARNN 594
            +     K G D  + V+ +LI++Y +C     A  VF  +       +++++  YA + 
Sbjct: 250 WMHEYVKKNGFDRYVKVNTALIDMYAKCGSLDDAFNVFRDMPKRDTQAWSAMIIAYATHG 309

Query: 595 MPNEALSLFREMQAGKIRP 651
              +A+S+ +EM+  K++P
Sbjct: 310 DGFQAMSMLKEMEKEKVKP 328


>ref|XP_004298429.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g02980-like [Fragaria vesca subsp. vesca]
          Length = 593

 Score =  241 bits (614), Expect = 2e-61
 Identities = 111/198 (56%), Positives = 153/198 (77%)
 Frame = +1

Query: 61  VSLIHKCSSLRELKQIHAFCVKSDLQNDINIVTKLINFCTKEPTDSTMEYAHHLFDEIPE 240
           +SLI KC+SL +L+QI AF +K+ LQ D+++++KLIN CT  PT ++M+YAH LFD+IP 
Sbjct: 22  ISLIPKCTSLTQLQQIQAFSIKTHLQYDLSVLSKLINSCTLNPTATSMDYAHQLFDQIPH 81

Query: 241 TDIGLFNSMARGYCRSNCPLHAIELFAQIMCSGVVPDHYTFPCLIKACANVKALEEGRQL 420
            DI +FN+MARGY RS  P  AI LF+Q++ SG+ PD YTFP L+KACA  KALEEG+QL
Sbjct: 82  PDIVVFNTMARGYSRSTTPFRAISLFSQVLSSGIFPDDYTFPALLKACAACKALEEGKQL 141

Query: 421 QGLAVKLGLDNDIYVSPSLINLYTECDDTILARRVFDSIGNPCVVCYNSILSGYARNNMP 600
               +K G+  +I+V P+LIN+YTEC    +AR+VFD +  PCVV +N++++GYARN+ P
Sbjct: 142 HCYVIKCGMQLNIFVCPALINMYTECSAVDVARQVFDKMPEPCVVVHNAMITGYARNSRP 201

Query: 601 NEALSLFREMQAGKIRPT 654
           NEAL+LFRE+QA  ++PT
Sbjct: 202 NEALALFRELQASGLKPT 219



 Score =  102 bits (255), Expect = 8e-20
 Identities = 56/191 (29%), Positives = 106/191 (55%)
 Frame = +1

Query: 79  CSSLRELKQIHAFCVKSDLQNDINIVTKLINFCTKEPTDSTMEYAHHLFDEIPETDIGLF 258
           C +L E KQ+H + +K  +Q +I +   LIN  T+    S ++ A  +FD++PE  + + 
Sbjct: 132 CKALEEGKQLHCYVIKCGMQLNIFVCPALINMYTE---CSAVDVARQVFDKMPEPCVVVH 188

Query: 259 NSMARGYCRSNCPLHAIELFAQIMCSGVVPDHYTFPCLIKACANVKALEEGRQLQGLAVK 438
           N+M  GY R++ P  A+ LF ++  SG+ P   T    + +CA + AL+ G+ +     K
Sbjct: 189 NAMITGYARNSRPNEALALFRELQASGLKPTDVTMLSALSSCALLGALDLGKWIHEYVKK 248

Query: 439 LGLDNDIYVSPSLINLYTECDDTILARRVFDSIGNPCVVCYNSILSGYARNNMPNEALSL 618
              D  + V+ +LI++Y++C     A  VF+++       +++++  YA +   ++A+ +
Sbjct: 249 NRFDRYVKVNTALIDMYSKCGSLEDAVSVFENMSVKDTQAWSAMIVAYATHGNVSKAMLM 308

Query: 619 FREMQAGKIRP 651
           F EM+  +IRP
Sbjct: 309 FEEMKRARIRP 319


>ref|XP_002316137.1| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|222865177|gb|EEF02308.1|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 601

 Score =  240 bits (612), Expect = 3e-61
 Identities = 115/201 (57%), Positives = 153/201 (76%)
 Frame = +1

Query: 49  PPPPVSLIHKCSSLRELKQIHAFCVKSDLQNDINIVTKLINFCTKEPTDSTMEYAHHLFD 228
           P   +S + KC+SL+ELKQI AF +K+ LQND+ I+TKLIN CT+ PT ++M+YAH LF+
Sbjct: 26  PSSLLSCLPKCTSLKELKQIQAFSIKTHLQNDLQILTKLINSCTQNPTTASMDYAHQLFE 85

Query: 229 EIPETDIGLFNSMARGYCRSNCPLHAIELFAQIMCSGVVPDHYTFPCLIKACANVKALEE 408
            IP+ DI LFNSM RGY RSN PL AI LF + +   ++PD YTFP L+KAC   KA ++
Sbjct: 86  AIPQPDIVLFNSMFRGYSRSNAPLKAISLFIKALNYNLLPDDYTFPSLLKACVVAKAFQQ 145

Query: 409 GRQLQGLAVKLGLDNDIYVSPSLINLYTECDDTILARRVFDSIGNPCVVCYNSILSGYAR 588
           G+QL  LA+KLGL+ + YV P+LIN+Y  C+D   A+RVFD I  PCVV YN+I++GYAR
Sbjct: 146 GKQLHCLAIKLGLNENPYVCPTLINMYAGCNDVDGAQRVFDEILEPCVVSYNAIITGYAR 205

Query: 589 NNMPNEALSLFREMQAGKIRP 651
           ++ PNEALSLFR++QA K++P
Sbjct: 206 SSRPNEALSLFRQLQARKLKP 226



 Score = 90.9 bits (224), Expect = 3e-16
 Identities = 55/199 (27%), Positives = 102/199 (51%), Gaps = 3/199 (1%)
 Frame = +1

Query: 64  SLIHKC---SSLRELKQIHAFCVKSDLQNDINIVTKLINFCTKEPTDSTMEYAHHLFDEI 234
           SL+  C    + ++ KQ+H   +K  L  +  +   LIN        + ++ A  +FDEI
Sbjct: 132 SLLKACVVAKAFQQGKQLHCLAIKLGLNENPYVCPTLINMYAG---CNDVDGAQRVFDEI 188

Query: 235 PETDIGLFNSMARGYCRSNCPLHAIELFAQIMCSGVVPDHYTFPCLIKACANVKALEEGR 414
            E  +  +N++  GY RS+ P  A+ LF Q+    + P+  T   ++ +CA + AL+ G+
Sbjct: 189 LEPCVVSYNAIITGYARSSRPNEALSLFRQLQARKLKPNDVTVLSVLSSCALLGALDLGK 248

Query: 415 QLQGLAVKLGLDNDIYVSPSLINLYTECDDTILARRVFDSIGNPCVVCYNSILSGYARNN 594
            +     K GLD  + V+ +LI++Y +C     A  VF+S+       +++++  YA + 
Sbjct: 249 WIHEYVKKNGLDKYVKVNTALIDMYAKCGSLDGAISVFESMSVRDTQAWSAMIVAYAMHG 308

Query: 595 MPNEALSLFREMQAGKIRP 651
              + +S+F EM   K++P
Sbjct: 309 QGQDVMSMFEEMARAKVQP 327


>ref|XP_003613787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355515122|gb|AES96745.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 586

 Score =  200 bits (509), Expect = 3e-49
 Identities = 106/212 (50%), Positives = 142/212 (66%), Gaps = 1/212 (0%)
 Frame = +1

Query: 22  PLIPTASINPPPP-VSLIHKCSSLRELKQIHAFCVKSDLQNDINIVTKLINFCTKEPTDS 198
           P   T S+ P P  +SLI KC++L+ELKQI A+ +K++ QN+ N++TK INFCT  PT +
Sbjct: 16  PNTETTSLLPLPHLISLIPKCTTLKELKQIQAYTIKTNYQNNTNVITKFINFCTSNPTKA 75

Query: 199 TMEYAHHLFDEIPETDIGLFNSMARGYCRSNCPLHAIELFAQIMCSGVVPDHYTFPCLIK 378
           +ME+AH LFD+I + +I LFN+MARGY R N PL  I  F +              CL +
Sbjct: 76  SMEHAHQLFDQITQPNIVLFNTMARGYARLNDPLRMITHFRR--------------CL-R 120

Query: 379 ACANVKALEEGRQLQGLAVKLGLDNDIYVSPSLINLYTECDDTILARRVFDSIGNPCVVC 558
             + VKAL EG+QL   AVKLG+ +++YV P+LIN+YT C D   +RRVFD I  PCVV 
Sbjct: 121 LVSKVKALAEGKQLHCFAVKLGVSDNMYVVPTLINMYTACGDIDASRRVFDKIDEPCVVA 180

Query: 559 YNSILSGYARNNMPNEALSLFREMQAGKIRPT 654
           YN+I+   ARNN  NEAL+LFRE+Q   ++PT
Sbjct: 181 YNAIIMSLARNNRANEALALFRELQEIGLKPT 212



 Score = 88.6 bits (218), Expect = 1e-15
 Identities = 53/195 (27%), Positives = 100/195 (51%)
 Frame = +1

Query: 67  LIHKCSSLRELKQIHAFCVKSDLQNDINIVTKLINFCTKEPTDSTMEYAHHLFDEIPETD 246
           L+ K  +L E KQ+H F VK  + +++ +V  LIN  T       ++ +  +FD+I E  
Sbjct: 121 LVSKVKALAEGKQLHCFAVKLGVSDNMYVVPTLINMYT---ACGDIDASRRVFDKIDEPC 177

Query: 247 IGLFNSMARGYCRSNCPLHAIELFAQIMCSGVVPDHYTFPCLIKACANVKALEEGRQLQG 426
           +  +N++     R+N    A+ LF ++   G+ P   T   ++ +CA + +L+ GR +  
Sbjct: 178 VVAYNAIIMSLARNNRANEALALFRELQEIGLKPTDVTMLVVLSSCALLGSLDLGRWMHE 237

Query: 427 LAVKLGLDNDIYVSPSLINLYTECDDTILARRVFDSIGNPCVVCYNSILSGYARNNMPNE 606
              K G D  + V+ +LI++Y +C     A  VF  +       +++I+  YA +    +
Sbjct: 238 YVKKYGFDRYVKVNTTLIDMYAKCGSLDDAVNVFRDMPKRDTQAWSAIIVAYATHGDGFQ 297

Query: 607 ALSLFREMQAGKIRP 651
           A+S+  EM+  K++P
Sbjct: 298 AISMLNEMKKEKVQP 312


>ref|XP_006827256.1| hypothetical protein AMTR_s00010p00262470 [Amborella trichopoda]
           gi|548831685|gb|ERM94493.1| hypothetical protein
           AMTR_s00010p00262470 [Amborella trichopoda]
          Length = 354

 Score =  181 bits (460), Expect = 1e-43
 Identities = 96/224 (42%), Positives = 144/224 (64%), Gaps = 10/224 (4%)
 Frame = +1

Query: 10  TTITPLIPTASINP---------PPPVSLIHKCSSLRELKQIHAFCVKSDLQNDINIVTK 162
           +T  PL PT   +P         PP +SL+ +C++L +LKQI A  +K+ LQN    ++K
Sbjct: 3   STALPLNPTHLSSPGTQISDSPSPPSLSLLSRCATLSQLKQIQANTIKTHLQNHAPTLSK 62

Query: 163 LINFCTKEPTDSTMEYAHHLFDEIPETDIGLFNSMARGYCRSNCPLHAIELFAQIMCSGV 342
           L +FC+    +  +EYA  LFD+IPE +  LFN++ R Y RS+ P+ AI LF +++ + +
Sbjct: 63  LASFCSLSLPEH-IEYAQQLFDQIPEPNTVLFNTLIRSYSRSHTPIQAINLFVKMLTNNI 121

Query: 343 VPDHYTFPCLIKACANVKALEEGRQLQGLAVKLGLDNDIYVSPSLINLYTECDDTILARR 522
            PD+YTFP ++KACA   ALEEGR L    +KL LD++I+V P+LI +Y +C     A++
Sbjct: 122 QPDNYTFPSILKACAMASALEEGRALHCHCIKLELDSNIFVQPTLIRMYADCGAIESAQK 181

Query: 523 VFD-SIGNPCVVCYNSILSGYARNNMPNEALSLFREMQAGKIRP 651
           VF+ ++    VV YNS+++ Y + + PNEAL+LFREMQA    P
Sbjct: 182 VFNATMKGRSVVLYNSMITAYVQRSRPNEALALFREMQAHNTPP 225



 Score = 80.9 bits (198), Expect = 3e-13
 Identities = 51/200 (25%), Positives = 103/200 (51%), Gaps = 4/200 (2%)
 Frame = +1

Query: 64  SLIHKC---SSLRELKQIHAFCVKSDLQNDINIVTKLINFCTKEPTDSTMEYAHHLFDEI 234
           S++  C   S+L E + +H  C+K +L ++I +   LI           +E A  +F+  
Sbjct: 130 SILKACAMASALEEGRALHCHCIKLELDSNIFVQPTLIRMYAD---CGAIESAQKVFNAT 186

Query: 235 PE-TDIGLFNSMARGYCRSNCPLHAIELFAQIMCSGVVPDHYTFPCLIKACANVKALEEG 411
            +   + L+NSM   Y + + P  A+ LF ++      P+  T   ++ AC+ + A++ G
Sbjct: 187 MKGRSVVLYNSMITAYVQRSRPNEALALFREMQAHNTPPNDVTVLSVLSACSLLGAVDLG 246

Query: 412 RQLQGLAVKLGLDNDIYVSPSLINLYTECDDTILARRVFDSIGNPCVVCYNSILSGYARN 591
           + +     K GLD  + V+ +LI++Y +C     A+ VF+ +       +++++  +A +
Sbjct: 247 KWVHEFVKKNGLDMFVKVNTALIDMYAKCGSIEDAKMVFEKMPFRDTQAWSAMIVAFAIH 306

Query: 592 NMPNEALSLFREMQAGKIRP 651
               +AL+LFR+M+  +I+P
Sbjct: 307 GQGEDALTLFRKMETERIKP 326