BLASTX nr result
ID: Rheum21_contig00026789
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00026789
(317 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABA97658.1| retrotransposon protein, putative, Ty1-copia subc... 127 1e-27
emb|CAH67061.1| H0112G12.6 [Oryza sativa Indica Group] 120 2e-25
gb|AAU10819.1| putative polyprotein [Oryza sativa Japonica Group... 119 3e-25
gb|ABA98073.1| retrotransposon protein, putative, unclassified [... 119 4e-25
ref|XP_004963727.1| PREDICTED: uncharacterized protein LOC101777... 117 1e-24
gb|EMT30033.1| hypothetical protein F775_17829 [Aegilops tauschii] 117 2e-24
emb|CAE05127.3| OSJNBa0079F16.14 [Oryza sativa Japonica Group] 116 3e-24
ref|XP_004966833.1| PREDICTED: uncharacterized protein LOC101766... 115 6e-24
ref|XP_002451986.1| hypothetical protein SORBIDRAFT_04g012210 [S... 115 8e-24
ref|XP_002446435.1| hypothetical protein SORBIDRAFT_06g016046 [S... 114 1e-23
ref|XP_002489126.1| hypothetical protein SORBIDRAFT_0019s003280 ... 114 1e-23
gb|AAT38052.1| unknown protein [Oryza sativa Japonica Group] gi|... 114 2e-23
gb|ADB85383.1| putative retrotransposon protein [Phyllostachys e... 113 3e-23
gb|ABA95677.1| retrotransposon protein, putative, Ty1-copia subc... 112 7e-23
ref|XP_004963982.1| PREDICTED: uncharacterized protein LOC101777... 111 1e-22
gb|ABA94365.1| retrotransposon protein, putative, unclassified [... 111 1e-22
ref|XP_002450808.1| hypothetical protein SORBIDRAFT_05g018905 [S... 109 3e-22
gb|ABA91195.1| retrotransposon protein, putative, Ty1-copia subc... 109 4e-22
gb|ABA99152.1| retrotransposon protein, putative, unclassified [... 108 6e-22
ref|XP_002438333.1| hypothetical protein SORBIDRAFT_10g012262 [S... 107 2e-21
>gb|ABA97658.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1597
Score = 127 bits (320), Expect = 1e-27
Identities = 57/103 (55%), Positives = 74/103 (71%)
Frame = +2
Query: 5 NDHHMCTRSKSRITKPNPIFNLSISNIVPIPRTYKQALQSPQWFKSMKEEYDALIKNGTW 184
NDH M TR K+ + KP NL S + P+PRTY+ AL P W +M+EE+ AL N TW
Sbjct: 1053 NDHTMTTRGKAGVRKPVQRLNLHASTLSPVPRTYRAALADPYWRTAMEEEFTALTANRTW 1112
Query: 185 DLVPRPTNANVISGKCLFRHKFGADGLLSRYKSRWVARGYSQQ 313
DLVPRP+ ANV++GK +F+HKF +DG L RYK+RWV RG+SQ+
Sbjct: 1113 DLVPRPSGANVVTGKWIFKHKFQSDGTLDRYKARWVLRGFSQR 1155
>emb|CAH67061.1| H0112G12.6 [Oryza sativa Indica Group]
Length = 811
Score = 120 bits (300), Expect = 2e-25
Identities = 55/103 (53%), Positives = 74/103 (71%)
Frame = +2
Query: 5 NDHHMCTRSKSRITKPNPIFNLSISNIVPIPRTYKQALQSPQWFKSMKEEYDALIKNGTW 184
NDH M TR+KS KP NL + + +P+TY+ AL P W +M+EEY+AL+ N TW
Sbjct: 277 NDHVMTTRAKSGHHKPVHRLNLHAAPLSLVPKTYRAALADPLWRAAMEEEYNALLANRTW 336
Query: 185 DLVPRPTNANVISGKCLFRHKFGADGLLSRYKSRWVARGYSQQ 313
DLVPRP + NV++GK +F+HKF ADG L RYK+RWV RG++Q+
Sbjct: 337 DLVPRPASVNVVAGKWIFKHKFHADGSLDRYKARWVLRGFTQR 379
>gb|AAU10819.1| putative polyprotein [Oryza sativa Japonica Group]
gi|53981353|gb|AAV24907.1| hypothetical protein [Oryza
sativa Japonica Group]
Length = 1679
Score = 119 bits (299), Expect = 3e-25
Identities = 55/103 (53%), Positives = 73/103 (70%)
Frame = +2
Query: 5 NDHHMCTRSKSRITKPNPIFNLSISNIVPIPRTYKQALQSPQWFKSMKEEYDALIKNGTW 184
NDH M TR+KS KP NL + + +P+TY+ AL P W +M+EEY+AL+ N TW
Sbjct: 1145 NDHVMTTRAKSGHHKPVHRLNLHAAPLSLVPKTYRAALADPLWRAAMEEEYNALLANRTW 1204
Query: 185 DLVPRPTNANVISGKCLFRHKFGADGLLSRYKSRWVARGYSQQ 313
DLVPRP NV++GK +F+HKF ADG L RYK+RWV RG++Q+
Sbjct: 1205 DLVPRPAGVNVVTGKWIFKHKFHADGSLDRYKARWVLRGFTQR 1247
>gb|ABA98073.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 724
Score = 119 bits (298), Expect = 4e-25
Identities = 54/103 (52%), Positives = 72/103 (69%)
Frame = +2
Query: 5 NDHHMCTRSKSRITKPNPIFNLSISNIVPIPRTYKQALQSPQWFKSMKEEYDALIKNGTW 184
NDH M R+K+ + K NL + + PIP+TY+ AL P W +M+EEY+AL+ N TW
Sbjct: 196 NDHGMTIRAKAGVRKELTRMNLHATPLSPIPKTYRAALADPNWRSAMEEEYNALLANRTW 255
Query: 185 DLVPRPTNANVISGKCLFRHKFGADGLLSRYKSRWVARGYSQQ 313
DLVP P ANV++GK +F+HKF ADG L RYK RWV RG++Q+
Sbjct: 256 DLVPCPVKANVVTGKWIFKHKFHADGSLDRYKVRWVLRGFTQR 298
>ref|XP_004963727.1| PREDICTED: uncharacterized protein LOC101777694 [Setaria italica]
Length = 1416
Score = 117 bits (294), Expect = 1e-24
Identities = 52/103 (50%), Positives = 73/103 (70%)
Frame = +2
Query: 5 NDHHMCTRSKSRITKPNPIFNLSISNIVPIPRTYKQALQSPQWFKSMKEEYDALIKNGTW 184
N H M TR K +P + S+S P+PR+Y+ AL P W ++M EE+DAL+ N TW
Sbjct: 873 NTHSMTTRGKMGFWQPTLFHSSSLS---PVPRSYRGALADPNWRQAMHEEFDALLSNNTW 929
Query: 185 DLVPRPTNANVISGKCLFRHKFGADGLLSRYKSRWVARGYSQQ 313
DLVPRP+ +N+++GK +F+HKF ADG L RYK+RWV RG++Q+
Sbjct: 930 DLVPRPSGSNIVTGKWIFKHKFHADGSLERYKARWVLRGFTQR 972
>gb|EMT30033.1| hypothetical protein F775_17829 [Aegilops tauschii]
Length = 764
Score = 117 bits (293), Expect = 2e-24
Identities = 50/97 (51%), Positives = 69/97 (71%)
Frame = +2
Query: 17 MCTRSKSRITKPNPIFNLSISNIVPIPRTYKQALQSPQWFKSMKEEYDALIKNGTWDLVP 196
M TR+K I +P IF+L + + PIP+TY+ AL+ P W +M EEY AL+ N TWDLV
Sbjct: 1 MATRAKQGIVQPKKIFDLHVEGLSPIPKTYRGALKDPNWHSAMVEEYGALLSNNTWDLVD 60
Query: 197 RPTNANVISGKCLFRHKFGADGLLSRYKSRWVARGYS 307
P NAN+++GK ++RHK +DG L RYK+RWV RG++
Sbjct: 61 PPHNANIVTGKWIYRHKMKSDGSLDRYKARWVLRGFT 97
>emb|CAE05127.3| OSJNBa0079F16.14 [Oryza sativa Japonica Group]
Length = 322
Score = 116 bits (291), Expect = 3e-24
Identities = 52/99 (52%), Positives = 71/99 (71%)
Frame = +2
Query: 17 MCTRSKSRITKPNPIFNLSISNIVPIPRTYKQALQSPQWFKSMKEEYDALIKNGTWDLVP 196
M TR K + +P +NLS + + P+PRTY+ AL P W +M+EE+ AL N TWDLVP
Sbjct: 1 MTTRGKHGLHQPVKRYNLSATTLSPVPRTYRPALADPNWRSAMEEEFTALQANRTWDLVP 60
Query: 197 RPTNANVISGKCLFRHKFGADGLLSRYKSRWVARGYSQQ 313
RP ANV++GK +FR+KF +DG L RYK+RWV RG++Q+
Sbjct: 61 RPNGANVVTGKWIFRYKFQSDGSLDRYKARWVLRGFTQR 99
>ref|XP_004966833.1| PREDICTED: uncharacterized protein LOC101766505 [Setaria italica]
Length = 943
Score = 115 bits (288), Expect = 6e-24
Identities = 51/103 (49%), Positives = 71/103 (68%)
Frame = +2
Query: 5 NDHHMCTRSKSRITKPNPIFNLSISNIVPIPRTYKQALQSPQWFKSMKEEYDALIKNGTW 184
NDH M TR KS +P NL + + +P++++ AL P W +M+ E+DAL+ N TW
Sbjct: 495 NDHGMRTRGKSGFRQPVDRLNLHTTTLSAVPKSFRSALADPHWRAAMQAEFDALLANDTW 554
Query: 185 DLVPRPTNANVISGKCLFRHKFGADGLLSRYKSRWVARGYSQQ 313
LVPRP+ N+I+GK +FRHKF ADG L RYK+RWV RG++Q+
Sbjct: 555 TLVPRPSGVNIITGKWIFRHKFLADGSLDRYKARWVLRGFTQR 597
>ref|XP_002451986.1| hypothetical protein SORBIDRAFT_04g012210 [Sorghum bicolor]
gi|241931817|gb|EES04962.1| hypothetical protein
SORBIDRAFT_04g012210 [Sorghum bicolor]
Length = 786
Score = 115 bits (287), Expect = 8e-24
Identities = 51/104 (49%), Positives = 74/104 (71%)
Frame = +2
Query: 2 TNDHHMCTRSKSRITKPNPIFNLSISNIVPIPRTYKQALQSPQWFKSMKEEYDALIKNGT 181
TN H+M TRSKS P+ + +S P+P+T++ AL P W +M++E+ AL++N T
Sbjct: 326 TNQHYMATRSKSGYRMPSIYHAVPLS---PVPKTFRSALADPNWRAAMEDEHSALLQNHT 382
Query: 182 WDLVPRPTNANVISGKCLFRHKFGADGLLSRYKSRWVARGYSQQ 313
WDLVPRP ANV++GK +F+HK +DG L RYK+RWV RG++Q+
Sbjct: 383 WDLVPRPPRANVVTGKWIFKHKLQSDGSLERYKARWVLRGFTQR 426
>ref|XP_002446435.1| hypothetical protein SORBIDRAFT_06g016046 [Sorghum bicolor]
gi|241937618|gb|EES10763.1| hypothetical protein
SORBIDRAFT_06g016046 [Sorghum bicolor]
Length = 856
Score = 114 bits (286), Expect = 1e-23
Identities = 54/105 (51%), Positives = 71/105 (67%), Gaps = 2/105 (1%)
Frame = +2
Query: 5 NDHHMCTRSKSRITKPN--PIFNLSISNIVPIPRTYKQALQSPQWFKSMKEEYDALIKNG 178
N H M TR KS +P P L + P+PR+ + AL PQW ++M+EEY AL N
Sbjct: 324 NTHGMATRGKSGYRQPRLQPRLALHTEALSPLPRSCRDALADPQWRRAMEEEYAALQDNN 383
Query: 179 TWDLVPRPTNANVISGKCLFRHKFGADGLLSRYKSRWVARGYSQQ 313
TW+LVPRP ANV++GK +F+HKF ADG L RYK+RWV RG++Q+
Sbjct: 384 TWELVPRPAKANVVTGKWIFKHKFHADGSLDRYKARWVLRGFTQR 428
>ref|XP_002489126.1| hypothetical protein SORBIDRAFT_0019s003280 [Sorghum bicolor]
gi|241947225|gb|EES20370.1| hypothetical protein
SORBIDRAFT_0019s003280 [Sorghum bicolor]
Length = 761
Score = 114 bits (285), Expect = 1e-23
Identities = 54/103 (52%), Positives = 70/103 (67%)
Frame = +2
Query: 5 NDHHMCTRSKSRITKPNPIFNLSISNIVPIPRTYKQALQSPQWFKSMKEEYDALIKNGTW 184
N H M TR K+ +P L I PIPR+ + AL P W ++M+EEY AL+ N TW
Sbjct: 219 NTHSMTTRGKAGFQQPR--LGLHAEAISPIPRSCRDALTDPHWRQAMEEEYAALMDNHTW 276
Query: 185 DLVPRPTNANVISGKCLFRHKFGADGLLSRYKSRWVARGYSQQ 313
DLVPRP ANV++GK +F+HKF ADG L RYK+RWV RG++Q+
Sbjct: 277 DLVPRPNAANVVTGKWIFKHKFHADGTLDRYKARWVLRGFTQR 319
>gb|AAT38052.1| unknown protein [Oryza sativa Japonica Group]
gi|215741379|dbj|BAG97874.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 224
Score = 114 bits (284), Expect = 2e-23
Identities = 56/103 (54%), Positives = 71/103 (68%), Gaps = 2/103 (1%)
Frame = +2
Query: 11 HHMCTRSKSRITKPNPIFNLSISN--IVPIPRTYKQALQSPQWFKSMKEEYDALIKNGTW 184
H M TRSK+ KP LS+S+ I P+ Y+ AL P W +M EE+ ALI NGTW
Sbjct: 69 HTMVTRSKTGSLKPVDRLVLSVSHNAISPLSANYRSALADPNWRAAMAEEFKALIDNGTW 128
Query: 185 DLVPRPTNANVISGKCLFRHKFGADGLLSRYKSRWVARGYSQQ 313
LVPRP ANV++GK +F+HKF +DG L+R+K+RWV RGYSQQ
Sbjct: 129 RLVPRPPGANVVTGKWIFKHKFHSDGSLARHKARWVVRGYSQQ 171
>gb|ADB85383.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 862
Score = 113 bits (282), Expect = 3e-23
Identities = 50/104 (48%), Positives = 71/104 (68%)
Frame = +2
Query: 2 TNDHHMCTRSKSRITKPNPIFNLSISNIVPIPRTYKQALQSPQWFKSMKEEYDALIKNGT 181
+NDH M TR K+ P IFNL + I P+P++Y+ AL P W +M EE+ AL N T
Sbjct: 319 SNDHTMVTRGKASYQHPVKIFNLHAALISPLPKSYRGALADPNWRAAMDEEFSALKANNT 378
Query: 182 WDLVPRPTNANVISGKCLFRHKFGADGLLSRYKSRWVARGYSQQ 313
WDL+P P++AN+++ K +FRHK +G L RYK+RWV RG++Q+
Sbjct: 379 WDLIPCPSSANIVTSKWVFRHKLHPNGSLDRYKARWVLRGFTQR 422
>gb|ABA95677.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 389
Score = 112 bits (279), Expect = 7e-23
Identities = 53/99 (53%), Positives = 70/99 (70%)
Frame = +2
Query: 17 MCTRSKSRITKPNPIFNLSISNIVPIPRTYKQALQSPQWFKSMKEEYDALIKNGTWDLVP 196
M TRSK+ KP + + +S I P+P Y+ L +P W +M +E+ ALI NGTW LVP
Sbjct: 1 MVTRSKTSSLKP--VDRVVLSAISPLPANYRSTLANPNWRAAMAKEFKALINNGTWRLVP 58
Query: 197 RPTNANVISGKCLFRHKFGADGLLSRYKSRWVARGYSQQ 313
RP ANVI+GK +F+HKF +DG L+R+K+RWV RGYSQQ
Sbjct: 59 RPPGANVITGKWIFKHKFHSDGSLARHKARWVVRGYSQQ 97
>ref|XP_004963982.1| PREDICTED: uncharacterized protein LOC101777276 [Setaria italica]
Length = 1188
Score = 111 bits (277), Expect = 1e-22
Identities = 50/103 (48%), Positives = 69/103 (66%)
Frame = +2
Query: 5 NDHHMCTRSKSRITKPNPIFNLSISNIVPIPRTYKQALQSPQWFKSMKEEYDALIKNGTW 184
N+H M TR KS +P NLS + + P+P++ + AL P W +M+ E+DAL N TW
Sbjct: 618 NEHSMRTRGKSGFVQPVDRLNLSAAALSPLPQSVRFALVDPNWRAAMQSEFDALKANDTW 677
Query: 185 DLVPRPTNANVISGKCLFRHKFGADGLLSRYKSRWVARGYSQQ 313
LVPRP N+++GK +FRHKF DG L RYK+RWV RG++Q+
Sbjct: 678 SLVPRPPGVNIVTGKWVFRHKFLTDGTLDRYKARWVLRGFTQR 720
>gb|ABA94365.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1064
Score = 111 bits (277), Expect = 1e-22
Identities = 52/103 (50%), Positives = 70/103 (67%), Gaps = 2/103 (1%)
Frame = +2
Query: 11 HHMCTRSKSRITKPNPIFNLSI--SNIVPIPRTYKQALQSPQWFKSMKEEYDALIKNGTW 184
H M TRS++ +P FN + +++ P+P Y+ AL P W +M +EY AL+ N TW
Sbjct: 568 HAMVTRSQTGNLRPVHRFNYTAMQTSVSPVPSNYRSALADPNWRAAMADEYKALVDNNTW 627
Query: 185 DLVPRPTNANVISGKCLFRHKFGADGLLSRYKSRWVARGYSQQ 313
LVPRP ANV+SGK +FRHKF +DG L+R+K+RWV R YSQQ
Sbjct: 628 RLVPRPPGANVVSGKWIFRHKFHSDGTLARHKARWVVRDYSQQ 670
>ref|XP_002450808.1| hypothetical protein SORBIDRAFT_05g018905 [Sorghum bicolor]
gi|241936651|gb|EES09796.1| hypothetical protein
SORBIDRAFT_05g018905 [Sorghum bicolor]
Length = 431
Score = 109 bits (273), Expect = 3e-22
Identities = 52/107 (48%), Positives = 74/107 (69%), Gaps = 3/107 (2%)
Frame = +2
Query: 2 TNDHHMCTRSKSRITKPNPIFNLSISNIVP---IPRTYKQALQSPQWFKSMKEEYDALIK 172
TN H M TRSKS P SI ++VP +P+T++ AL P W +M++E++AL++
Sbjct: 288 TNQHSMATRSKSGYRMP------SIYHVVPLSLVPKTFRSALADPNWRAAMEDEHNALLQ 341
Query: 173 NGTWDLVPRPTNANVISGKCLFRHKFGADGLLSRYKSRWVARGYSQQ 313
N TWDLVPRP ANV++GK +F+HK +DG L RYK+ WV RG++Q+
Sbjct: 342 NHTWDLVPRPPWANVVTGKWIFKHKLQSDGSLERYKAHWVLRGFTQR 388
>gb|ABA91195.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 978
Score = 109 bits (272), Expect = 4e-22
Identities = 51/103 (49%), Positives = 70/103 (67%), Gaps = 2/103 (1%)
Frame = +2
Query: 11 HHMCTRSKSRITKPNPIFNLSISNIV--PIPRTYKQALQSPQWFKSMKEEYDALIKNGTW 184
H M TRS++ +P F + ++ V P+P Y+ AL P W +M +EY AL+ N TW
Sbjct: 480 HTMVTRSQTGHLRPIHRFTYTATHDVVSPVPSNYRSALADPNWRAAMADEYKALVDNNTW 539
Query: 185 DLVPRPTNANVISGKCLFRHKFGADGLLSRYKSRWVARGYSQQ 313
LVPRP ANV++GK +F+HKF +DG L+R+K+RWV RGYSQQ
Sbjct: 540 RLVPRPPGANVVTGKWIFKHKFHSDGTLARHKARWVVRGYSQQ 582
>gb|ABA99152.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 989
Score = 108 bits (271), Expect = 6e-22
Identities = 48/104 (46%), Positives = 74/104 (71%)
Frame = +2
Query: 2 TNDHHMCTRSKSRITKPNPIFNLSISNIVPIPRTYKQALQSPQWFKSMKEEYDALIKNGT 181
TN+H M TR+K+ P+ + ++S P+P T++ AL P W +++EE+ AL++N T
Sbjct: 442 TNNHDMTTRAKAGHRFPSVYNSTTLS---PVPCTFRGALADPNWRAALEEEFSALLQNNT 498
Query: 182 WDLVPRPTNANVISGKCLFRHKFGADGLLSRYKSRWVARGYSQQ 313
W+LVPRPT N+++GK +F+HKF ADG L RYK+RWV G++Q+
Sbjct: 499 WELVPRPTQVNIVTGKWIFKHKFRADGSLERYKARWVLGGFTQR 542
>ref|XP_002438333.1| hypothetical protein SORBIDRAFT_10g012262 [Sorghum bicolor]
gi|241916556|gb|EER89700.1| hypothetical protein
SORBIDRAFT_10g012262 [Sorghum bicolor]
Length = 447
Score = 107 bits (267), Expect = 2e-21
Identities = 51/101 (50%), Positives = 68/101 (67%), Gaps = 2/101 (1%)
Frame = +2
Query: 17 MCTRSKSRITKPNPIF--NLSISNIVPIPRTYKQALQSPQWFKSMKEEYDALIKNGTWDL 190
M TR++ KPNP + + S PIPRT QALQ P W K+M+ E++ALI N TW+L
Sbjct: 96 MVTRARVGTFKPNPRYAATATTSTPSPIPRTVHQALQEPNWTKAMQSEFNALIANNTWEL 155
Query: 191 VPRPTNANVISGKCLFRHKFGADGLLSRYKSRWVARGYSQQ 313
VPRP A+++SGK +F HKF DG RYK+RWV R ++Q+
Sbjct: 156 VPRPPRAHIVSGKWIFVHKFKEDGSFDRYKARWVVRVFTQR 196