BLASTX nr result
ID: Rheum21_contig00026377
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00026377
(563 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAC63844.1| putative non-LTR retroelement reverse transcripta... 208 8e-52
gb|ABW81175.1| non-LTR retrotransposon transposase [Arabidopsis ... 206 3e-51
emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulga... 197 2e-48
ref|XP_006480844.1| PREDICTED: putative ribonuclease H protein A... 183 3e-44
ref|XP_006490008.1| PREDICTED: uncharacterized protein LOC102624... 178 9e-43
gb|ABD28505.2| RNA-directed DNA polymerase (Reverse transcriptas... 176 4e-42
dbj|BAE79385.1| unnamed protein product [Ipomoea batatas] 173 3e-41
dbj|BAE79382.1| unnamed protein product [Ipomoea batatas] 173 3e-41
dbj|BAE79384.1| unnamed protein product [Ipomoea batatas] 171 1e-40
gb|ABD28627.2| RNA-directed DNA polymerase (Reverse transcriptas... 165 6e-39
emb|CAB10337.1| reverse transcriptase like protein [Arabidopsis ... 164 1e-38
gb|EMJ14411.1| hypothetical protein PRUPE_ppb013620mg [Prunus pe... 164 1e-38
gb|EOY02376.1| LINE-type retrotransposon LIb DNA, Insertion at t... 162 4e-38
gb|AAC26674.1| putative non-LTR retroelement reverse transcripta... 157 1e-36
emb|CAB78008.1| putative protein [Arabidopsis thaliana] gi|73210... 154 1e-35
emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulga... 150 3e-34
gb|AAD37021.1| putative non-LTR retrolelement reverse transcript... 149 5e-34
gb|AAF23831.1|AC007234_3 F1E22.12 [Arabidopsis thaliana] 143 3e-32
gb|ABO80459.1| RNA-directed DNA polymerase (Reverse transcriptas... 143 3e-32
gb|EOY21798.1| Uncharacterized protein TCM_013937 [Theobroma cacao] 139 5e-31
>gb|AAC63844.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1231
Score = 208 bits (529), Expect = 8e-52
Identities = 103/187 (55%), Positives = 134/187 (71%)
Frame = -3
Query: 561 ILWNGEMERQFRPSRGVR*GDPLSPYLFVLCMERLGHIIDEAVSARAWKPISLSENGLGL 382
+LWNGE F P+RG+R GDPLSPYLFVLC+ERL H+I+ +V R WKPI++S G L
Sbjct: 480 VLWNGERTDSFVPARGLRQGDPLSPYLFVLCLERLCHLIEASVGKREWKPIAVSCGGSKL 539
Query: 381 SHLFFVDDLILFVEASPEQMRVIKFCLERFCNASGAKINFAKSMICFSDATPPDIVDRVC 202
SH+ F DDLILF EAS Q+R+I+ LERFC ASG K++ KS I FS ++ +
Sbjct: 540 SHVCFADDLILFAEASVAQIRIIRRVLERFCEASGQKVSLEKSKIFFSHNVSREMEQLIS 599
Query: 201 REGGIPATDDLGKYLGIPMSKKKMSKHTFKHILE*VDAKLAGWKGKLLSLAGRITLAKST 22
E GI T +LGKYLG+P+ +K+M+K TF +LE V A+LAGWKG+ LSLAGRITL K+
Sbjct: 600 EESGIGCTKELGKYLGMPILQKRMNKETFGEVLERVSARLAGWKGRSLSLAGRITLTKAV 659
Query: 21 VATQKVH 1
+++ VH
Sbjct: 660 LSSIPVH 666
>gb|ABW81175.1| non-LTR retrotransposon transposase [Arabidopsis cebennensis]
Length = 799
Score = 206 bits (524), Expect = 3e-51
Identities = 103/187 (55%), Positives = 134/187 (71%)
Frame = -3
Query: 561 ILWNGEMERQFRPSRGVR*GDPLSPYLFVLCMERLGHIIDEAVSARAWKPISLSENGLGL 382
+LWNGE F PSRG+R GDPLSPYLFVLC+ERL H ID AV + WKPIS+S G L
Sbjct: 72 VLWNGEKTESFIPSRGLRQGDPLSPYLFVLCLERLCHQIDLAVGTKEWKPISMSRGGPLL 131
Query: 381 SHLFFVDDLILFVEASPEQMRVIKFCLERFCNASGAKINFAKSMICFSDATPPDIVDRVC 202
SH+ F DDLILF EAS Q+RV++ LE+FC ASG K++ KS I FS D+ +
Sbjct: 132 SHICFADDLILFAEASVAQIRVVRKVLEKFCIASGQKVSLEKSKIFFSQNVHRDLEKFIS 191
Query: 201 REGGIPATDDLGKYLGIPMSKKKMSKHTFKHILE*VDAKLAGWKGKLLSLAGRITLAKST 22
E GI +T +LGKYLG+P+ +K+++K TF IL V ++LAGWKG++LSLAGR+TL KS
Sbjct: 192 DESGIKSTKELGKYLGMPVLQKRINKDTFGEILLRVSSRLAGWKGRMLSLAGRLTLTKSV 251
Query: 21 VATQKVH 1
+++ +H
Sbjct: 252 LSSIPIH 258
>emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1378
Score = 197 bits (500), Expect = 2e-48
Identities = 97/183 (53%), Positives = 129/183 (70%)
Frame = -3
Query: 561 ILWNGEMERQFRPSRGVR*GDPLSPYLFVLCMERLGHIIDEAVSARAWKPISLSENGLGL 382
ILWNGE + P+RG+R GDPLSPYL+V+CMERL H+ID+ V+ WKP+ S NG +
Sbjct: 623 ILWNGEPMEKICPTRGLRQGDPLSPYLYVICMERLAHLIDQEVTNGNWKPVKASRNGPPI 682
Query: 381 SHLFFVDDLILFVEASPEQMRVIKFCLERFCNASGAKINFAKSMICFSDATPPDIVDRVC 202
S+L F DDLILF EAS EQ +V+K+CL+RFC ASG+K+N KS I FS T DI D VC
Sbjct: 683 SNLAFADDLILFSEASVEQAQVMKWCLDRFCEASGSKVNEDKSKIYFSANTHLDIRDAVC 742
Query: 201 REGGIPATDDLGKYLGIPMSKKKMSKHTFKHILE*VDAKLAGWKGKLLSLAGRITLAKST 22
+ AT D GKYLG+P + SK ++++++ ++ KLAGWK K LS+AGR TL +S
Sbjct: 743 NTLAMEATADFGKYLGVPTINGRSSKREYQYLVDRINGKLAGWKTKTLSIAGRATLIQSA 802
Query: 21 VAT 13
++
Sbjct: 803 FSS 805
>ref|XP_006480844.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
sinensis]
Length = 768
Score = 183 bits (464), Expect = 3e-44
Identities = 92/187 (49%), Positives = 122/187 (65%)
Frame = -3
Query: 561 ILWNGEMERQFRPSRGVR*GDPLSPYLFVLCMERLGHIIDEAVSARAWKPISLSENGLGL 382
ILW+GE+ F PSRGVR GDPLSPY+FVLC+ERL H I +++ WKPI LS G L
Sbjct: 47 ILWHGELTDDFSPSRGVRQGDPLSPYIFVLCVERLSHGIYQSIHQDHWKPIRLSRLGTPL 106
Query: 381 SHLFFVDDLILFVEASPEQMRVIKFCLERFCNASGAKINFAKSMICFSDATPPDIVDRVC 202
SHLFF DDL+LF EA+ Q + I L FC +SG K+N +K+ + FS P + R+
Sbjct: 107 SHLFFTDDLLLFAEATSGQAQCINSVLGDFCLSSGTKVNQSKTHVYFSKNVPDAVATRIW 166
Query: 201 REGGIPATDDLGKYLGIPMSKKKMSKHTFKHILE*VDAKLAGWKGKLLSLAGRITLAKST 22
R+ G T DLGKYLG+P+ ++S+ T++ IL+ D KL GW LSLAGRITL +S
Sbjct: 167 RDLGYTVTKDLGKYLGMPLLHSRVSQQTYQGILDKTDQKLLGWAASQLSLAGRITLTQSV 226
Query: 21 VATQKVH 1
+ ++
Sbjct: 227 LQAVPIY 233
>ref|XP_006490008.1| PREDICTED: uncharacterized protein LOC102624085 [Citrus sinensis]
Length = 1635
Score = 178 bits (451), Expect = 9e-43
Identities = 86/187 (45%), Positives = 123/187 (65%)
Frame = -3
Query: 561 ILWNGEMERQFRPSRGVR*GDPLSPYLFVLCMERLGHIIDEAVSARAWKPISLSENGLGL 382
+LWNGE+ +F P RGVR GDPLSPY+FVLC+ERL H I ++ WKPI L+ G L
Sbjct: 1113 VLWNGELSSEFCPGRGVRQGDPLSPYIFVLCIERLSHGISRSIQQGHWKPIRLARMGTPL 1172
Query: 381 SHLFFVDDLILFVEASPEQMRVIKFCLERFCNASGAKINFAKSMICFSDATPPDIVDRVC 202
SHLFF DDL+ EAS +Q +I ++ F +SGAK+N +K+++ FS R+
Sbjct: 1173 SHLFFADDLLFLSEASSQQAIIINKIIDEFSASSGAKVNKSKTLVYFSANISAMEASRIG 1232
Query: 201 REGGIPATDDLGKYLGIPMSKKKMSKHTFKHILE*VDAKLAGWKGKLLSLAGRITLAKST 22
+ G TD+LGKYLG+P+ ++SK T++ I++ +D +L+GW L+LAGRITLA+S
Sbjct: 1233 SDLGYSVTDNLGKYLGVPLCHSRISKQTYQSIVDKIDQRLSGWNASHLTLAGRITLAQSV 1292
Query: 21 VATQKVH 1
+ V+
Sbjct: 1293 LQAISVY 1299
>gb|ABD28505.2| RNA-directed DNA polymerase (Reverse transcriptase);
Polynucleotidyl transferase, Ribonuclease H fold
[Medicago truncatula]
Length = 729
Score = 176 bits (446), Expect = 4e-42
Identities = 86/183 (46%), Positives = 116/183 (63%)
Frame = -3
Query: 561 ILWNGEMERQFRPSRGVR*GDPLSPYLFVLCMERLGHIIDEAVSARAWKPISLSENGLGL 382
I+WNG+ F PSRG+R GDPLSPYLFV+CMERL HII + V A WKP+ G +
Sbjct: 47 IMWNGDKSESFYPSRGIRQGDPLSPYLFVICMERLSHIIADQVEADYWKPMRAGRYGPPI 106
Query: 381 SHLFFVDDLILFVEASPEQMRVIKFCLERFCNASGAKINFAKSMICFSDATPPDIVDRVC 202
SHL F DDL+LF EAS EQ + CL+ FC +SG KIN K+ + FS + + +
Sbjct: 107 SHLLFADDLLLFAEASIEQAHCVLHCLDMFCQSSGQKINREKTQVYFSKNVDNHLREDII 166
Query: 201 REGGIPATDDLGKYLGIPMSKKKMSKHTFKHILE*VDAKLAGWKGKLLSLAGRITLAKST 22
+ G + LGKYLG ++ + S+ F HI+ + KL+GWK + LSLAGRITL+K
Sbjct: 167 QHTGFNQVNSLGKYLGANITPGRTSRGHFNHIINKIQNKLSGWKQQCLSLAGRITLSKFV 226
Query: 21 VAT 13
+++
Sbjct: 227 ISS 229
>dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]
Length = 1366
Score = 173 bits (438), Expect = 3e-41
Identities = 84/183 (45%), Positives = 121/183 (66%)
Frame = -3
Query: 561 ILWNGEMERQFRPSRGVR*GDPLSPYLFVLCMERLGHIIDEAVSARAWKPISLSENGLGL 382
ILWNG F+P RG+R GDPL+PYLF L MERL H I V+AR WKP+ ++ G G+
Sbjct: 621 ILWNGGRLPPFKPGRGLRQGDPLAPYLFNLVMERLAHDIQTRVNARTWKPVHITRGGTGI 680
Query: 381 SHLFFVDDLILFVEASPEQMRVIKFCLERFCNASGAKINFAKSMICFSDATPPDIVDRVC 202
SHLFF DDL+LF EAS Q +++ CL+ F NASG K+NF+KS++ S + +
Sbjct: 681 SHLFFADDLMLFGEASEHQAQIMFDCLDSFSNASGLKVNFSKSLLFCSSNVNAGLKRAIG 740
Query: 201 REGGIPATDDLGKYLGIPMSKKKMSKHTFKHILE*VDAKLAGWKGKLLSLAGRITLAKST 22
+P + LG YLGIPM K+++S++TF +++ + KL+ WK L++AGR L +++
Sbjct: 741 SILQVPVAESLGTYLGIPMLKERVSRNTFNAVIDKMRTKLSSWKASSLNMAGRRVLVQAS 800
Query: 21 VAT 13
+AT
Sbjct: 801 LAT 803
>dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]
Length = 1366
Score = 173 bits (438), Expect = 3e-41
Identities = 84/183 (45%), Positives = 121/183 (66%)
Frame = -3
Query: 561 ILWNGEMERQFRPSRGVR*GDPLSPYLFVLCMERLGHIIDEAVSARAWKPISLSENGLGL 382
ILWNG F+P RG+R GDPL+PYLF L MERL H I V+AR WKP+ ++ G G+
Sbjct: 621 ILWNGGRLPPFKPGRGLRQGDPLAPYLFNLVMERLAHDIQTRVNARTWKPVHITRGGTGI 680
Query: 381 SHLFFVDDLILFVEASPEQMRVIKFCLERFCNASGAKINFAKSMICFSDATPPDIVDRVC 202
SHLFF DDL+LF EAS Q +++ CL+ F NASG K+NF+KS++ S + +
Sbjct: 681 SHLFFADDLMLFGEASEHQAQIMFDCLDSFSNASGLKVNFSKSLLFCSSNVNAGLKRAIG 740
Query: 201 REGGIPATDDLGKYLGIPMSKKKMSKHTFKHILE*VDAKLAGWKGKLLSLAGRITLAKST 22
+P + LG YLGIPM K+++S++TF +++ + KL+ WK L++AGR L +++
Sbjct: 741 SILQVPVAESLGTYLGIPMLKERVSRNTFNAVIDKMRTKLSSWKASSLNMAGRRVLVQAS 800
Query: 21 VAT 13
+AT
Sbjct: 801 LAT 803
>dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]
Length = 1898
Score = 171 bits (432), Expect = 1e-40
Identities = 83/183 (45%), Positives = 120/183 (65%)
Frame = -3
Query: 561 ILWNGEMERQFRPSRGVR*GDPLSPYLFVLCMERLGHIIDEAVSARAWKPISLSENGLGL 382
ILWNG F+P RG+R GDPL PYLF L MERL H I V+AR WKP+ ++ G G+
Sbjct: 1153 ILWNGGRPPPFKPGRGLRQGDPLVPYLFNLVMERLAHDIQTRVNARTWKPVHITRGGTGI 1212
Query: 381 SHLFFVDDLILFVEASPEQMRVIKFCLERFCNASGAKINFAKSMICFSDATPPDIVDRVC 202
SHLFF DDL+LF EAS Q +++ CL+ F +ASG K+NF+KS++ S + +
Sbjct: 1213 SHLFFADDLMLFGEASEHQAQIMFDCLDSFSDASGLKVNFSKSLLFCSSNVNAGLKRAIG 1272
Query: 201 REGGIPATDDLGKYLGIPMSKKKMSKHTFKHILE*VDAKLAGWKGKLLSLAGRITLAKST 22
+P + LG YLGIPM K+++S++TF +++ + KL+ WK L++AGR L +++
Sbjct: 1273 SILQVPVAESLGTYLGIPMLKERVSRNTFNAVIDKMRTKLSSWKASSLNMAGRRVLVQAS 1332
Query: 21 VAT 13
+AT
Sbjct: 1333 LAT 1335
>gb|ABD28627.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H
[Medicago truncatula]
Length = 1296
Score = 165 bits (418), Expect = 6e-39
Identities = 81/183 (44%), Positives = 115/183 (62%)
Frame = -3
Query: 561 ILWNGEMERQFRPSRGVR*GDPLSPYLFVLCMERLGHIIDEAVSARAWKPISLSENGLGL 382
+LWNG F+P+ G+R GDPLSPYLF+LCME+L I +AV +W+PI + +G +
Sbjct: 619 LLWNGNKMPPFKPTHGLRQGDPLSPYLFILCMEKLSVAIQDAVLQGSWEPIHIINDGPQI 678
Query: 381 SHLFFVDDLILFVEASPEQMRVIKFCLERFCNASGAKINFAKSMICFSDATPPDIVDRVC 202
SHL F DD++LF +A Q++ I +RF ASG KIN +KS +S TP ++ +
Sbjct: 679 SHLLFADDVLLFTKAKSSQLQFITNLFDRFSRASGLKINISKSRAYYSSGTPNGKINNLT 738
Query: 201 REGGIPATDDLGKYLGIPMSKKKMSKHTFKHILE*VDAKLAGWKGKLLSLAGRITLAKST 22
GI +T LGKYLG PM + + + F ILE + +LA WK +LL+ GR+TLA S
Sbjct: 739 AISGIQSTTTLGKYLGFPMLQGRPKRSDFNFILEKMQTRLASWKNRLLNRTGRLTLATSV 798
Query: 21 VAT 13
++T
Sbjct: 799 LST 801
>emb|CAB10337.1| reverse transcriptase like protein [Arabidopsis thaliana]
gi|7268307|emb|CAB78601.1| reverse transcriptase like
protein [Arabidopsis thaliana]
Length = 929
Score = 164 bits (416), Expect = 1e-38
Identities = 87/187 (46%), Positives = 118/187 (63%)
Frame = -3
Query: 561 ILWNGEMERQFRPSRGVR*GDPLSPYLFVLCMERLGHIIDEAVSARAWKPISLSENGLGL 382
+LWNGE F P RG+R GDP+SPYLFVLC+ERL H I+ AV WK IS+S+ G +
Sbjct: 432 LLWNGEKTDSFTPERGLRQGDPISPYLFVLCIERLCHQIETAVGRGDWKSISISQGGPKV 491
Query: 381 SHLFFVDDLILFVEASPEQMRVIKFCLERFCNASGAKINFAKSMICFSDATPPDIVDRVC 202
SH+ F DDLILF EAS Q K++ KS I FS+ D+ +
Sbjct: 492 SHVCFADDLILFAEASVAQ-----------------KVSLEKSKIFFSNNVSRDLEGLIT 534
Query: 201 REGGIPATDDLGKYLGIPMSKKKMSKHTFKHILE*VDAKLAGWKGKLLSLAGRITLAKST 22
E GI +T +LGKYLG+P+ +K+++K TF +LE V ++L+GWK + LSLAGRITL K+
Sbjct: 535 AETGIGSTRELGKYLGMPVLQKRINKDTFGEVLERVSSRLSGWKSRSLSLAGRITLTKAV 594
Query: 21 VATQKVH 1
+ + +H
Sbjct: 595 LMSIPIH 601
>gb|EMJ14411.1| hypothetical protein PRUPE_ppb013620mg [Prunus persica]
Length = 993
Score = 164 bits (415), Expect = 1e-38
Identities = 81/158 (51%), Positives = 108/158 (68%)
Frame = -3
Query: 552 NGEMERQFRPSRGVR*GDPLSPYLFVLCMERLGHIIDEAVSARAWKPISLSENGLGLSHL 373
NGE+ F P G+R GDPLSPYLFVLC+E+L HII +AV + WKPI S NG +SHL
Sbjct: 834 NGELTDPFSPGNGIRQGDPLSPYLFVLCIEKLSHIIVDAVKRKLWKPIKTSRNGPSVSHL 893
Query: 372 FFVDDLILFVEASPEQMRVIKFCLERFCNASGAKINFAKSMICFSDATPPDIVDRVCREG 193
FF DDL LF EA+P Q RV+K CL+ FC+ASG +NFAKS+I S T + +
Sbjct: 894 FFADDLALFAEATPCQARVMKNCLDLFCSASGQAVNFAKSVIFCSPNTCKMVAKEIGAIC 953
Query: 192 GIPATDDLGKYLGIPMSKKKMSKHTFKHILE*VDAKLA 79
G P T++LGKYLG+P+ +++K T+ +L+ V ++LA
Sbjct: 954 GSPITENLGKYLGLPLLHSRVTKVTYNGLLDKVQSRLA 991
>gb|EOY02376.1| LINE-type retrotransposon LIb DNA, Insertion at the S11 site-like
protein [Theobroma cacao]
Length = 620
Score = 162 bits (411), Expect = 4e-38
Identities = 83/183 (45%), Positives = 114/183 (62%)
Frame = -3
Query: 561 ILWNGEMERQFRPSRGVR*GDPLSPYLFVLCMERLGHIIDEAVSARAWKPISLSENGLGL 382
ILWNG +F PSRGVR GDPL+PYLFVLC+E+L H I +AV WKPI L ++G L
Sbjct: 194 ILWNGTCFEKFFPSRGVRLGDPLAPYLFVLCIEKLAHGIKQAVEQEMWKPIRLGKHGPPL 253
Query: 381 SHLFFVDDLILFVEASPEQMRVIKFCLERFCNASGAKINFAKSMICFSDATPPDIVDRVC 202
++LFF+DDLIL EAS QM VIK LE FC K+ AKS S P ++ +V
Sbjct: 254 TYLFFMDDLILLAEASESQMEVIKGVLEDFCACLRGKVCIAKSTFFCSKNVPMELNIKVK 313
Query: 201 REGGIPATDDLGKYLGIPMSKKKMSKHTFKHILE*VDAKLAGWKGKLLSLAGRITLAKST 22
G +D +GKY+G+P+ + + H +K +++ V ++L WK LS GR+TL +S
Sbjct: 314 DCSGFSYSDSMGKYIGVPLLHGRKTAHIYKSLIDKVRSRLCAWKASSLSSTGRLTLVQSV 373
Query: 21 VAT 13
+ +
Sbjct: 374 LTS 376
>gb|AAC26674.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 970
Score = 157 bits (398), Expect = 1e-36
Identities = 85/187 (45%), Positives = 115/187 (61%)
Frame = -3
Query: 561 ILWNGEMERQFRPSRGVR*GDPLSPYLFVLCMERLGHIIDEAVSARAWKPISLSENGLGL 382
+LWNG F P+RG+R GDPLSPYLFVLC+ERL H+I+ +V WKP++LS
Sbjct: 330 VLWNGGKTDSFVPARGLRQGDPLSPYLFVLCLERLCHLIEASVGTWDWKPMALS------ 383
Query: 381 SHLFFVDDLILFVEASPEQMRVIKFCLERFCNASGAKINFAKSMICFSDATPPDIVDRVC 202
EAS Q+ +I+ LE+FC ASG ++ KS I FS+ D+ +
Sbjct: 384 ------------CEASVAQILIIRRVLEQFCEASGQNVSLEKSKIVFSNNVSRDMERLIS 431
Query: 201 REGGIPATDDLGKYLGIPMSKKKMSKHTFKHILE*VDAKLAGWKGKLLSLAGRITLAKST 22
E GI T +LGKYLG+P+ +K+M+K T +LE V + LAGWK + LSLA RITL K+
Sbjct: 432 GESGIGCTRELGKYLGMPILQKRMNKETSGEVLEHVSSSLAGWKSRSLSLAWRITLTKAV 491
Query: 21 VATQKVH 1
++T VH
Sbjct: 492 LSTIPVH 498
>emb|CAB78008.1| putative protein [Arabidopsis thaliana] gi|7321072|emb|CAB82119.1|
putative protein [Arabidopsis thaliana]
Length = 947
Score = 154 bits (390), Expect = 1e-35
Identities = 77/155 (49%), Positives = 107/155 (69%)
Frame = -3
Query: 465 ERLGHIIDEAVSARAWKPISLSENGLGLSHLFFVDDLILFVEASPEQMRVIKFCLERFCN 286
ERL H+ID AV+ + WK I LS+ G +SH+ F DDLILF EAS Q+RVI+ LE FC
Sbjct: 326 ERLCHMIDRAVAVKEWKSIGLSQGGPKISHICFADDLILFAEASVSQIRVIRRILETFCI 385
Query: 285 ASGAKINFAKSMICFSDATPPDIVDRVCREGGIPATDDLGKYLGIPMSKKKMSKHTFKHI 106
ASG K++ KS I FS D+ + +E GI +T +LGKYLG+P+ +++++K TF +
Sbjct: 386 ASGQKVSLDKSKIFFSKNVSRDLEKLISKESGIKSTRELGKYLGMPILQRRINKDTFGEV 445
Query: 105 LE*VDAKLAGWKGKLLSLAGRITLAKSTVATQKVH 1
LE V ++LAGWKG+ LS AGR+TL KS ++ +H
Sbjct: 446 LERVSSRLAGWKGRSLSFAGRLTLTKSVLSLIPIH 480
>emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1363
Score = 150 bits (378), Expect = 3e-34
Identities = 77/187 (41%), Positives = 115/187 (61%)
Frame = -3
Query: 561 ILWNGEMERQFRPSRGVR*GDPLSPYLFVLCMERLGHIIDEAVSARAWKPISLSENGLGL 382
++WNGE+ + F PSRG+R GDPLSPY+FVLCMERL +I + + +WKPI +S + LG+
Sbjct: 621 LIWNGEVTQSFSPSRGIRQGDPLSPYIFVLCMERLSMLISDRIRDGSWKPIKISSD-LGV 679
Query: 381 SHLFFVDDLILFVEASPEQMRVIKFCLERFCNASGAKINFAKSMICFSDATPPDIVDRVC 202
SH+F+ DD+ LF +AS VI+ LE F N SG ++N +KS+ F P +
Sbjct: 680 SHIFYADDVFLFGQASVRNGGVIQNVLEEFGNISGLRVNMSKSLAIFPPKMNPQRRRMLA 739
Query: 201 REGGIPATDDLGKYLGIPMSKKKMSKHTFKHILE*VDAKLAGWKGKLLSLAGRITLAKST 22
+ + GKYLG + K+ + + +LE V + + GW+ K L++AGR TL KS
Sbjct: 740 DFLTMKGSTSFGKYLGCNILPNKLRRGDYDGLLEKVKSAINGWQAKYLNMAGRCTLIKSV 799
Query: 21 VATQKVH 1
V++ V+
Sbjct: 800 VSSFPVY 806
>gb|AAD37021.1| putative non-LTR retrolelement reverse transcriptase [Arabidopsis
thaliana]
Length = 732
Score = 149 bits (376), Expect = 5e-34
Identities = 74/148 (50%), Positives = 105/148 (70%)
Frame = -3
Query: 444 DEAVSARAWKPISLSENGLGLSHLFFVDDLILFVEASPEQMRVIKFCLERFCNASGAKIN 265
+ +++ + WKPISLS+ G LSH+ F DDLILF EAS Q+RVI+ LERFC ASG K++
Sbjct: 181 EHSIARKDWKPISLSQGGPKLSHICFADDLILFAEASVAQIRVIRRVLERFCVASGQKVS 240
Query: 264 FAKSMICFSDATPPDIVDRVCREGGIPATDDLGKYLGIPMSKKKMSKHTFKHILE*VDAK 85
KS I FS+ D+ + E GI +T +LGKYLG+P+ +++++K TF ILE + +
Sbjct: 241 LEKSKIFFSENVSRDLGKLISDESGISSTRELGKYLGMPVLQRRINKDTFGDILEKLTTR 300
Query: 84 LAGWKGKLLSLAGRITLAKSTVATQKVH 1
LAGWKG+ LSLAGR+TL K+ +++ VH
Sbjct: 301 LAGWKGRFLSLAGRVTLTKAVLSSIPVH 328
>gb|AAF23831.1|AC007234_3 F1E22.12 [Arabidopsis thaliana]
Length = 1055
Score = 143 bits (360), Expect = 3e-32
Identities = 70/133 (52%), Positives = 92/133 (69%)
Frame = -3
Query: 561 ILWNGEMERQFRPSRGVR*GDPLSPYLFVLCMERLGHIIDEAVSARAWKPISLSENGLGL 382
+LWNGE F+P RG+R GD LSPYLFVLCMERL H+I+ +++A+ WKPI+LS G L
Sbjct: 57 LLWNGEKTTPFKPLRGLRQGDLLSPYLFVLCMERLCHLIERSINAKQWKPINLSRGGPKL 116
Query: 381 SHLFFVDDLILFVEASPEQMRVIKFCLERFCNASGAKINFAKSMICFSDATPPDIVDRVC 202
SH+ F DDLILF EAS EQ+++++ LE FC ASG K++ KS I FS ++ +
Sbjct: 117 SHICFADDLILFAEASVEQVQIVRRVLEAFCTASGQKVSLEKSKIFFSKNVSRELGKLIS 176
Query: 201 REGGIPATDDLGK 163
E GI +T D GK
Sbjct: 177 DESGIQSTCDWGK 189
>gb|ABO80459.1| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H
[Medicago truncatula]
Length = 869
Score = 143 bits (360), Expect = 3e-32
Identities = 75/172 (43%), Positives = 103/172 (59%)
Frame = -3
Query: 561 ILWNGEMERQFRPSRGVR*GDPLSPYLFVLCMERLGHIIDEAVSARAWKPISLSENGLGL 382
+LWNG +P+ G+R GDPLSPYLF++CME+L I++AV W+PI +S + L
Sbjct: 179 VLWNGNKWPPIKPTHGLRQGDPLSPYLFIICMEKLSLAINKAVHEGEWEPIRMSASSPPL 238
Query: 381 SHLFFVDDLILFVEASPEQMRVIKFCLERFCNASGAKINFAKSMICFSDATPPDIVDRVC 202
SHL F DD++LF +A Q+R IK +RF A G KIN +KS F P + +
Sbjct: 239 SHLLFADDVLLFTKAKNSQLRFIKDLFDRFSKALGLKINLSKSR-AFYSGVPHQKIINLT 297
Query: 201 REGGIPATDDLGKYLGIPMSKKKMSKHTFKHILE*VDAKLAGWKGKLLSLAG 46
GI +T LGKYLG P+ K + + F I+E + +LA WK KLL+ AG
Sbjct: 298 SISGIRSTTSLGKYLGFPILKGRPKRSDFLFIIEKMRNRLATWKNKLLNKAG 349
>gb|EOY21798.1| Uncharacterized protein TCM_013937 [Theobroma cacao]
Length = 309
Score = 139 bits (350), Expect = 5e-31
Identities = 69/183 (37%), Positives = 106/183 (57%)
Frame = -3
Query: 561 ILWNGEMERQFRPSRGVR*GDPLSPYLFVLCMERLGHIIDEAVSARAWKPISLSENGLGL 382
I+WNG F +RG+R GDPLSPYLFVLC+E+L +ID V W+P+ L+ NG L
Sbjct: 106 IIWNGTRTNTFSRTRGIRQGDPLSPYLFVLCLEKLSQLIDNKVWLGNWRPLLLTRNGPFL 165
Query: 381 SHLFFVDDLILFVEASPEQMRVIKFCLERFCNASGAKINFAKSMICFSDATPPDIVDRVC 202
+H+ + DDL+LF S +Q++V+ L+RF SG K+ +K + S P +
Sbjct: 166 AHVCYADDLVLFRVTSTKQVQVMMKTLDRFYLVSGQKVGLSKWRLLVSSKVSPVKAKNLS 225
Query: 201 REGGIPATDDLGKYLGIPMSKKKMSKHTFKHILE*VDAKLAGWKGKLLSLAGRITLAKST 22
T D GKY G P + +++++ T+ ++ V ++ W K LS+AGRI+L +S
Sbjct: 226 SIAKTTLTKDFGKYHGAPATHERITQTTYSELINEVQLRMESWSNKYLSVAGRISLVQSV 285
Query: 21 VAT 13
+T
Sbjct: 286 TST 288