BLASTX nr result
ID: Rheum21_contig00026242
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00026242
(349 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ESW18300.1| hypothetical protein PHAVU_006G029300g [Phaseolus... 114 1e-23
ref|XP_004513404.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho... 114 2e-23
ref|XP_003541530.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho... 113 2e-23
ref|XP_003530707.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho... 113 2e-23
ref|XP_006423264.1| hypothetical protein CICLE_v10027820mg [Citr... 110 2e-22
ref|XP_006423263.1| hypothetical protein CICLE_v10027820mg [Citr... 110 2e-22
ref|XP_002530492.1| cell cycle control protein cwf22, putative [... 110 2e-22
gb|ESW20227.1| hypothetical protein PHAVU_006G191000g [Phaseolus... 109 3e-22
gb|EXC36384.1| Pre-mRNA-splicing factor CWC22-like protein [Moru... 109 4e-22
ref|XP_004162101.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-spl... 108 7e-22
gb|EOX96356.1| MIF4G domain-containing protein / MA3 domain-cont... 108 9e-22
gb|EOX96354.1| MIF4G domain-containing protein / MA3 domain-cont... 108 9e-22
gb|EOX96353.1| MIF4G domain-containing protein / MA3 domain-cont... 108 9e-22
gb|EOX96351.1| MIF4G domain-containing protein / MA3 domain-cont... 108 9e-22
ref|XP_004142129.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho... 107 1e-21
emb|CBI38093.3| unnamed protein product [Vitis vinifera] 107 2e-21
ref|XP_002265479.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho... 107 2e-21
gb|ESW25473.1| hypothetical protein PHAVU_003G039000g [Phaseolus... 105 8e-21
ref|XP_004295206.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho... 104 1e-20
ref|XP_006367294.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho... 103 2e-20
>gb|ESW18300.1| hypothetical protein PHAVU_006G029300g [Phaseolus vulgaris]
Length = 866
Score = 114 bits (285), Expect = 1e-23
Identities = 55/79 (69%), Positives = 66/79 (83%)
Frame = +3
Query: 3 EKRLQFLIEGLFAIHTT*F*GYPAIHPELDLVELEDQLTHEINIIDEAVDPDTSLDIFSP 182
+KR+QFLIEGLFAI F GYPA+ PELDLVE EDQLTHE++ +DE +DP+ SLDIF P
Sbjct: 492 DKRVQFLIEGLFAIRKAKFQGYPAVRPELDLVEQEDQLTHEVS-LDEEIDPEISLDIFKP 550
Query: 183 DPNYLENKKRYNELKKFIL 239
DPN+LEN+KRY ELKK +L
Sbjct: 551 DPNFLENEKRYEELKKSML 569
>ref|XP_004513404.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Cicer arietinum]
Length = 803
Score = 114 bits (284), Expect = 2e-23
Identities = 54/79 (68%), Positives = 66/79 (83%)
Frame = +3
Query: 3 EKRLQFLIEGLFAIHTT*F*GYPAIHPELDLVELEDQLTHEINIIDEAVDPDTSLDIFSP 182
+KR+QFLIEGLFAI F G+PA+ PELDLVE EDQLTHE++ +DE +DP+ SLDIF P
Sbjct: 433 DKRVQFLIEGLFAIRKAKFQGFPAVRPELDLVEQEDQLTHEVS-LDEVIDPEISLDIFKP 491
Query: 183 DPNYLENKKRYNELKKFIL 239
DPNY+EN+KRY ELKK +L
Sbjct: 492 DPNYMENEKRYEELKKTML 510
>ref|XP_003541530.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Glycine max]
Length = 860
Score = 113 bits (283), Expect = 2e-23
Identities = 54/79 (68%), Positives = 66/79 (83%)
Frame = +3
Query: 3 EKRLQFLIEGLFAIHTT*F*GYPAIHPELDLVELEDQLTHEINIIDEAVDPDTSLDIFSP 182
+KR+QFLIEGLFAI F GYPA+ PELDLVE EDQ+THE++ +DE +DP+ SLDIF P
Sbjct: 484 DKRVQFLIEGLFAIRKAKFQGYPAVRPELDLVEQEDQITHEVS-LDEEIDPEISLDIFKP 542
Query: 183 DPNYLENKKRYNELKKFIL 239
DPN+LEN+KRY ELKK +L
Sbjct: 543 DPNFLENEKRYEELKKSML 561
>ref|XP_003530707.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog isoform X1
[Glycine max] gi|571473788|ref|XP_006586031.1|
PREDICTED: pre-mRNA-splicing factor CWC22 homolog
isoform X2 [Glycine max]
Length = 871
Score = 113 bits (283), Expect = 2e-23
Identities = 54/79 (68%), Positives = 66/79 (83%)
Frame = +3
Query: 3 EKRLQFLIEGLFAIHTT*F*GYPAIHPELDLVELEDQLTHEINIIDEAVDPDTSLDIFSP 182
+KR+QFLIEGLFAI F GYPA+ PELDLVE EDQ+THE++ +DE +DP+ SLDIF P
Sbjct: 500 DKRVQFLIEGLFAIRKAKFQGYPAVRPELDLVEQEDQITHEVS-LDEEIDPEISLDIFKP 558
Query: 183 DPNYLENKKRYNELKKFIL 239
DPN+LEN+KRY ELKK +L
Sbjct: 559 DPNFLENEKRYEELKKSML 577
>ref|XP_006423264.1| hypothetical protein CICLE_v10027820mg [Citrus clementina]
gi|568867638|ref|XP_006487141.1| PREDICTED:
pre-mRNA-splicing factor CWC22 homolog [Citrus sinensis]
gi|557525198|gb|ESR36504.1| hypothetical protein
CICLE_v10027820mg [Citrus clementina]
Length = 832
Score = 110 bits (275), Expect = 2e-22
Identities = 59/118 (50%), Positives = 76/118 (64%), Gaps = 3/118 (2%)
Frame = +3
Query: 3 EKRLQFLIEGLFAIHTT*F*GYPAIHPELDLVELEDQLTHEINIIDEAVDPDTSLDIFSP 182
+KR+QFLIEGLFAI F GYPA+ PELDLV++EDQLTHEI++ DE +DP+ +LDIF P
Sbjct: 452 DKRVQFLIEGLFAIRKAKFQGYPAVRPELDLVDIEDQLTHEISLQDE-IDPEITLDIFKP 510
Query: 183 DPNYLENKKRYNELKKFIL---XXXXXXXXXXXXXXXXXXXXXXXXXXXQMKIKDQTE 347
DPN+L+N+KRY ++KK +L QMKIKD+TE
Sbjct: 511 DPNFLDNEKRYEDMKKDLLGETSEDEEGSDAGSGDEDDSEEEEEEEDEEQMKIKDETE 568
>ref|XP_006423263.1| hypothetical protein CICLE_v10027820mg [Citrus clementina]
gi|557525197|gb|ESR36503.1| hypothetical protein
CICLE_v10027820mg [Citrus clementina]
Length = 709
Score = 110 bits (275), Expect = 2e-22
Identities = 59/118 (50%), Positives = 76/118 (64%), Gaps = 3/118 (2%)
Frame = +3
Query: 3 EKRLQFLIEGLFAIHTT*F*GYPAIHPELDLVELEDQLTHEINIIDEAVDPDTSLDIFSP 182
+KR+QFLIEGLFAI F GYPA+ PELDLV++EDQLTHEI++ DE +DP+ +LDIF P
Sbjct: 452 DKRVQFLIEGLFAIRKAKFQGYPAVRPELDLVDIEDQLTHEISLQDE-IDPEITLDIFKP 510
Query: 183 DPNYLENKKRYNELKKFIL---XXXXXXXXXXXXXXXXXXXXXXXXXXXQMKIKDQTE 347
DPN+L+N+KRY ++KK +L QMKIKD+TE
Sbjct: 511 DPNFLDNEKRYEDMKKDLLGETSEDEEGSDAGSGDEDDSEEEEEEEDEEQMKIKDETE 568
>ref|XP_002530492.1| cell cycle control protein cwf22, putative [Ricinus communis]
gi|223529949|gb|EEF31876.1| cell cycle control protein
cwf22, putative [Ricinus communis]
Length = 810
Score = 110 bits (274), Expect = 2e-22
Identities = 54/79 (68%), Positives = 65/79 (82%)
Frame = +3
Query: 3 EKRLQFLIEGLFAIHTT*F*GYPAIHPELDLVELEDQLTHEINIIDEAVDPDTSLDIFSP 182
+KR+QFLIEGLFAI F GYPA+ PELDLVE EDQLTHEI+ + E +DP+ +LDIF P
Sbjct: 401 DKRVQFLIEGLFAIRKAKFQGYPAVRPELDLVEQEDQLTHEIS-LQEDIDPEITLDIFKP 459
Query: 183 DPNYLENKKRYNELKKFIL 239
DP++LEN+KRY ELKK IL
Sbjct: 460 DPDFLENEKRYEELKKSIL 478
>gb|ESW20227.1| hypothetical protein PHAVU_006G191000g [Phaseolus vulgaris]
Length = 649
Score = 109 bits (273), Expect = 3e-22
Identities = 53/79 (67%), Positives = 65/79 (82%)
Frame = +3
Query: 3 EKRLQFLIEGLFAIHTT*F*GYPAIHPELDLVELEDQLTHEINIIDEAVDPDTSLDIFSP 182
+KR+QFLIEGLFAI F GYPA+ PELDLVE EDQLTHE++ +DE +D + S+DIF P
Sbjct: 279 DKRVQFLIEGLFAIRKAKFQGYPAVRPELDLVEQEDQLTHEVS-LDEEIDLEISIDIFKP 337
Query: 183 DPNYLENKKRYNELKKFIL 239
DPN+LEN+KRY ELKK +L
Sbjct: 338 DPNFLENEKRYEELKKSML 356
>gb|EXC36384.1| Pre-mRNA-splicing factor CWC22-like protein [Morus notabilis]
Length = 850
Score = 109 bits (272), Expect = 4e-22
Identities = 53/79 (67%), Positives = 64/79 (81%)
Frame = +3
Query: 3 EKRLQFLIEGLFAIHTT*F*GYPAIHPELDLVELEDQLTHEINIIDEAVDPDTSLDIFSP 182
+KR+QFLIEGLFAI F GYPA+ PELDLVE EDQLTHEI+ + E +DP+ +LD+F P
Sbjct: 474 DKRVQFLIEGLFAIRKAKFQGYPAVRPELDLVEQEDQLTHEIS-LQEEIDPEITLDLFKP 532
Query: 183 DPNYLENKKRYNELKKFIL 239
DPNY EN+KRY EL+K IL
Sbjct: 533 DPNYSENEKRYEELRKNIL 551
>ref|XP_004162101.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-splicing factor CWC22
homolog, partial [Cucumis sativus]
Length = 780
Score = 108 bits (270), Expect = 7e-22
Identities = 53/79 (67%), Positives = 64/79 (81%)
Frame = +3
Query: 3 EKRLQFLIEGLFAIHTT*F*GYPAIHPELDLVELEDQLTHEINIIDEAVDPDTSLDIFSP 182
+KR+QFLIEGLFAI F GYPA+ PELDLVE EDQLTHEI+ + E +DP+ +LDIF
Sbjct: 421 DKRVQFLIEGLFAIRKAKFEGYPAVRPELDLVEQEDQLTHEIS-LQEEIDPEITLDIFKS 479
Query: 183 DPNYLENKKRYNELKKFIL 239
DPN+LEN+KRY +LKK IL
Sbjct: 480 DPNFLENEKRYEDLKKXIL 498
>gb|EOX96356.1| MIF4G domain-containing protein / MA3 domain-containing protein
isoform 6 [Theobroma cacao]
Length = 855
Score = 108 bits (269), Expect = 9e-22
Identities = 54/79 (68%), Positives = 64/79 (81%)
Frame = +3
Query: 3 EKRLQFLIEGLFAIHTT*F*GYPAIHPELDLVELEDQLTHEINIIDEAVDPDTSLDIFSP 182
+KR+QFLIEGLFAI F GYPA+ ELDLVE EDQLTHEI++ DE +DP+ +LDIF P
Sbjct: 474 DKRVQFLIEGLFAIRKAKFQGYPAVRSELDLVEHEDQLTHEISLQDE-IDPEITLDIFKP 532
Query: 183 DPNYLENKKRYNELKKFIL 239
DP +LEN+KRY ELKK IL
Sbjct: 533 DPQFLENEKRYEELKKTIL 551
>gb|EOX96354.1| MIF4G domain-containing protein / MA3 domain-containing protein
isoform 4 [Theobroma cacao] gi|508704459|gb|EOX96355.1|
MIF4G domain-containing protein / MA3 domain-containing
protein isoform 4 [Theobroma cacao]
Length = 901
Score = 108 bits (269), Expect = 9e-22
Identities = 54/79 (68%), Positives = 64/79 (81%)
Frame = +3
Query: 3 EKRLQFLIEGLFAIHTT*F*GYPAIHPELDLVELEDQLTHEINIIDEAVDPDTSLDIFSP 182
+KR+QFLIEGLFAI F GYPA+ ELDLVE EDQLTHEI++ DE +DP+ +LDIF P
Sbjct: 520 DKRVQFLIEGLFAIRKAKFQGYPAVRSELDLVEHEDQLTHEISLQDE-IDPEITLDIFKP 578
Query: 183 DPNYLENKKRYNELKKFIL 239
DP +LEN+KRY ELKK IL
Sbjct: 579 DPQFLENEKRYEELKKTIL 597
>gb|EOX96353.1| MIF4G domain-containing protein / MA3 domain-containing protein
isoform 3 [Theobroma cacao]
Length = 990
Score = 108 bits (269), Expect = 9e-22
Identities = 54/79 (68%), Positives = 64/79 (81%)
Frame = +3
Query: 3 EKRLQFLIEGLFAIHTT*F*GYPAIHPELDLVELEDQLTHEINIIDEAVDPDTSLDIFSP 182
+KR+QFLIEGLFAI F GYPA+ ELDLVE EDQLTHEI++ DE +DP+ +LDIF P
Sbjct: 609 DKRVQFLIEGLFAIRKAKFQGYPAVRSELDLVEHEDQLTHEISLQDE-IDPEITLDIFKP 667
Query: 183 DPNYLENKKRYNELKKFIL 239
DP +LEN+KRY ELKK IL
Sbjct: 668 DPQFLENEKRYEELKKTIL 686
>gb|EOX96351.1| MIF4G domain-containing protein / MA3 domain-containing protein
isoform 1 [Theobroma cacao] gi|508704456|gb|EOX96352.1|
MIF4G domain-containing protein / MA3 domain-containing
protein isoform 1 [Theobroma cacao]
Length = 1011
Score = 108 bits (269), Expect = 9e-22
Identities = 54/79 (68%), Positives = 64/79 (81%)
Frame = +3
Query: 3 EKRLQFLIEGLFAIHTT*F*GYPAIHPELDLVELEDQLTHEINIIDEAVDPDTSLDIFSP 182
+KR+QFLIEGLFAI F GYPA+ ELDLVE EDQLTHEI++ DE +DP+ +LDIF P
Sbjct: 630 DKRVQFLIEGLFAIRKAKFQGYPAVRSELDLVEHEDQLTHEISLQDE-IDPEITLDIFKP 688
Query: 183 DPNYLENKKRYNELKKFIL 239
DP +LEN+KRY ELKK IL
Sbjct: 689 DPQFLENEKRYEELKKTIL 707
>ref|XP_004142129.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Cucumis sativus]
Length = 797
Score = 107 bits (268), Expect = 1e-21
Identities = 53/79 (67%), Positives = 64/79 (81%)
Frame = +3
Query: 3 EKRLQFLIEGLFAIHTT*F*GYPAIHPELDLVELEDQLTHEINIIDEAVDPDTSLDIFSP 182
+KR+QFLIEGLFAI F GYPA+ PELDLVE EDQLTHEI+ + E +DP+ +LDIF
Sbjct: 421 DKRVQFLIEGLFAIRKAKFEGYPAVRPELDLVEQEDQLTHEIS-LQEEIDPEITLDIFKS 479
Query: 183 DPNYLENKKRYNELKKFIL 239
DPN+LEN+KRY +LKK IL
Sbjct: 480 DPNFLENEKRYEDLKKNIL 498
>emb|CBI38093.3| unnamed protein product [Vitis vinifera]
Length = 2607
Score = 107 bits (266), Expect = 2e-21
Identities = 52/79 (65%), Positives = 65/79 (82%)
Frame = +3
Query: 3 EKRLQFLIEGLFAIHTT*F*GYPAIHPELDLVELEDQLTHEINIIDEAVDPDTSLDIFSP 182
+KR+QFLIEGLFAI F G+PA+ PELDLVE EDQLTHEI+ ++E +DP+ +LDIF P
Sbjct: 128 DKRVQFLIEGLFAIRKAKFQGHPAVRPELDLVEQEDQLTHEIS-LEEKIDPEITLDIFKP 186
Query: 183 DPNYLENKKRYNELKKFIL 239
DP +LE++KRY ELKK IL
Sbjct: 187 DPQFLESEKRYEELKKTIL 205
>ref|XP_002265479.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Vitis vinifera]
Length = 785
Score = 107 bits (266), Expect = 2e-21
Identities = 52/79 (65%), Positives = 65/79 (82%)
Frame = +3
Query: 3 EKRLQFLIEGLFAIHTT*F*GYPAIHPELDLVELEDQLTHEINIIDEAVDPDTSLDIFSP 182
+KR+QFLIEGLFAI F G+PA+ PELDLVE EDQLTHEI+ ++E +DP+ +LDIF P
Sbjct: 404 DKRVQFLIEGLFAIRKAKFQGHPAVRPELDLVEQEDQLTHEIS-LEEKIDPEITLDIFKP 462
Query: 183 DPNYLENKKRYNELKKFIL 239
DP +LE++KRY ELKK IL
Sbjct: 463 DPQFLESEKRYEELKKTIL 481
>gb|ESW25473.1| hypothetical protein PHAVU_003G039000g [Phaseolus vulgaris]
Length = 629
Score = 105 bits (261), Expect = 8e-21
Identities = 52/79 (65%), Positives = 63/79 (79%)
Frame = +3
Query: 3 EKRLQFLIEGLFAIHTT*F*GYPAIHPELDLVELEDQLTHEINIIDEAVDPDTSLDIFSP 182
+KR+QFLIEGLFAI F GYPA+ PE DLVE E QLTHE++ +DE +DP SLDIF P
Sbjct: 260 DKRVQFLIEGLFAIRKAKFQGYPAVRPEFDLVEPELQLTHEVS-LDEEIDPAISLDIFKP 318
Query: 183 DPNYLENKKRYNELKKFIL 239
DP+YL+N+KRY ELKK +L
Sbjct: 319 DPDYLKNEKRYEELKKSML 337
>ref|XP_004295206.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Fragaria vesca
subsp. vesca]
Length = 838
Score = 104 bits (260), Expect = 1e-20
Identities = 50/79 (63%), Positives = 65/79 (82%)
Frame = +3
Query: 3 EKRLQFLIEGLFAIHTT*F*GYPAIHPELDLVELEDQLTHEINIIDEAVDPDTSLDIFSP 182
+KR+QFLIEGLFAI F G+PA+ PELDLVE EDQLTHEI+ + E ++P+ +LDIF P
Sbjct: 458 DKRVQFLIEGLFAIRKAKFQGHPAVRPELDLVEQEDQLTHEIS-LQEEINPEITLDIFKP 516
Query: 183 DPNYLENKKRYNELKKFIL 239
DP+++EN+KRY E+KK IL
Sbjct: 517 DPDFIENEKRYEEVKKTIL 535
>ref|XP_006367294.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Solanum
tuberosum]
Length = 951
Score = 103 bits (258), Expect = 2e-20
Identities = 57/118 (48%), Positives = 72/118 (61%), Gaps = 3/118 (2%)
Frame = +3
Query: 3 EKRLQFLIEGLFAIHTT*F*GYPAIHPELDLVELEDQLTHEINIIDEAVDPDTSLDIFSP 182
+KR+QFLIE LFA+ F GY A+ PELDLVE EDQLTHE+++ D +DP+ +LDIF P
Sbjct: 582 DKRVQFLIESLFALRKAKFQGYQAVRPELDLVEQEDQLTHEVSLSD-TIDPEIALDIFKP 640
Query: 183 DPNYLENKKRYNELKKFIL---XXXXXXXXXXXXXXXXXXXXXXXXXXXQMKIKDQTE 347
DPN+LEN+++Y ELKK IL QMKIKD+TE
Sbjct: 641 DPNFLENERKYEELKKAILGEESEEEGDSGAESEDEDEDEESDEEEDEEQMKIKDETE 698