BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00026180
         (382 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003638273.1| 40S ribosomal protein S3 [Medicago truncatul...    70   3e-10
ref|XP_003589329.1| 40S ribosomal protein S3 [Medicago truncatul...    70   3e-10
gb|ACJ83904.1| unknown [Medicago truncatula] gi|388507820|gb|AFK...    70   3e-10
ref|XP_003590123.1| 40S ribosomal protein S3 [Medicago truncatul...    70   4e-10
ref|XP_002876229.1| 40S ribosomal protein S3 [Arabidopsis lyrata...    69   5e-10
gb|EXB38920.1| 40S ribosomal protein S3-3 [Morus notabilis]            67   2e-09
ref|XP_002870433.1| 40S ribosomal protein S3 [Arabidopsis lyrata...    67   2e-09
ref|NP_198403.1| 40S ribosomal protein S3-3 [Arabidopsis thalian...    67   3e-09
ref|XP_002281141.2| PREDICTED: 40S ribosomal protein S3-3-like [...    67   3e-09
dbj|BAH20127.1| AT5G35530 [Arabidopsis thaliana]                       67   3e-09
ref|XP_004497806.1| PREDICTED: 40S ribosomal protein S3-3-like [...    66   6e-09
ref|XP_004497123.1| PREDICTED: 40S ribosomal protein S3-2-like i...    65   7e-09
ref|XP_004497122.1| PREDICTED: 40S ribosomal protein S3-2-like i...    65   7e-09
gb|AFK35364.1| unknown [Lotus japonicus] gi|388504726|gb|AFK4042...    65   7e-09
gb|ACU19393.1| unknown [Glycine max]                                   65   7e-09
ref|NP_001239621.1| uncharacterized protein LOC100808705 [Glycin...    65   7e-09
ref|XP_006854617.1| hypothetical protein AMTR_s00030p00157370 [A...    65   9e-09
ref|XP_006451562.1| hypothetical protein CICLE_v10009346mg [Citr...    65   1e-08
ref|XP_003637438.1| 40S ribosomal protein S3 [Medicago truncatul...    65   1e-08
ref|XP_003619403.1| 40S ribosomal protein S3 [Medicago truncatul...    65   1e-08

>ref|XP_003638273.1| 40S ribosomal protein S3 [Medicago truncatula]
           gi|355504208|gb|AES85411.1| 40S ribosomal protein S3
           [Medicago truncatula]
          Length = 239

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 31/45 (68%), Positives = 35/45 (77%), Gaps = 1/45 (2%)
 Frame = -3

Query: 380 WDPKGKQGPTTPLPDVVIIHTPKEEETYVAPALLPVNVVE-PAPI 249
           WDPKGKQGP TPLPD+V IHTPKEEE Y+ PA +  N +E P PI
Sbjct: 192 WDPKGKQGPKTPLPDIVTIHTPKEEEEYIRPAAVVANDIEVPVPI 236


>ref|XP_003589329.1| 40S ribosomal protein S3 [Medicago truncatula]
           gi|355478377|gb|AES59580.1| 40S ribosomal protein S3
           [Medicago truncatula]
          Length = 239

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 31/45 (68%), Positives = 35/45 (77%), Gaps = 1/45 (2%)
 Frame = -3

Query: 380 WDPKGKQGPTTPLPDVVIIHTPKEEETYVAPALLPVNVVE-PAPI 249
           WDPKGKQGP TPLPD+V IHTPKEEE Y+ PA +  N +E P PI
Sbjct: 192 WDPKGKQGPKTPLPDIVTIHTPKEEEEYIRPAAVVANDIEVPVPI 236


>gb|ACJ83904.1| unknown [Medicago truncatula] gi|388507820|gb|AFK41976.1| unknown
           [Medicago truncatula]
          Length = 239

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 31/45 (68%), Positives = 35/45 (77%), Gaps = 1/45 (2%)
 Frame = -3

Query: 380 WDPKGKQGPTTPLPDVVIIHTPKEEETYVAPALLPVNVVE-PAPI 249
           WDPKGKQGP TPLPD+V IHTPKEEE Y+ PA +  N +E P PI
Sbjct: 192 WDPKGKQGPKTPLPDIVTIHTPKEEEEYIRPAAVVANDIEVPVPI 236


>ref|XP_003590123.1| 40S ribosomal protein S3 [Medicago truncatula]
           gi|217071466|gb|ACJ84093.1| unknown [Medicago
           truncatula] gi|355479171|gb|AES60374.1| 40S ribosomal
           protein S3 [Medicago truncatula]
           gi|388518095|gb|AFK47109.1| unknown [Medicago
           truncatula]
          Length = 239

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 30/45 (66%), Positives = 35/45 (77%), Gaps = 1/45 (2%)
 Frame = -3

Query: 380 WDPKGKQGPTTPLPDVVIIHTPKEEETYVAPALLPVNVVE-PAPI 249
           WDPKGKQGP TPLPD+V IHTPKEEE Y+ PA +  N +E P P+
Sbjct: 192 WDPKGKQGPKTPLPDIVTIHTPKEEEEYIRPAAVVANDIEVPVPV 236


>ref|XP_002876229.1| 40S ribosomal protein S3 [Arabidopsis lyrata subsp. lyrata]
           gi|297322067|gb|EFH52488.1| 40S ribosomal protein S3
           [Arabidopsis lyrata subsp. lyrata]
          Length = 249

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 32/46 (69%), Positives = 37/46 (80%), Gaps = 2/46 (4%)
 Frame = -3

Query: 380 WDPKGKQGPTTPLPDVVIIHTPKEEETYVAPALL--PVNVVEPAPI 249
           WDPKGK GP TPLPDVVIIH+PKEEETYVAPA +  P  ++  AP+
Sbjct: 192 WDPKGKLGPMTPLPDVVIIHSPKEEETYVAPAQVAAPAALIAEAPL 237


>gb|EXB38920.1| 40S ribosomal protein S3-3 [Morus notabilis]
          Length = 323

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 30/46 (65%), Positives = 35/46 (76%), Gaps = 2/46 (4%)
 Frame = -3

Query: 380 WDPKGKQGPTTPLPDVVIIHTPKEEETYV--APALLPVNVVEPAPI 249
           WDPKGKQGPTTPLPDVV IH PKEE+ Y+  AP L P ++  P P+
Sbjct: 275 WDPKGKQGPTTPLPDVVTIHPPKEEDEYLRSAPLLAPADIDLPVPV 320


>ref|XP_002870433.1| 40S ribosomal protein S3 [Arabidopsis lyrata subsp. lyrata]
           gi|297316269|gb|EFH46692.1| 40S ribosomal protein S3
           [Arabidopsis lyrata subsp. lyrata]
          Length = 248

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 30/46 (65%), Positives = 36/46 (78%), Gaps = 2/46 (4%)
 Frame = -3

Query: 380 WDPKGKQGPTTPLPDVVIIHTPKEEETYVAPA--LLPVNVVEPAPI 249
           WDPKGK GP TPLPDVVIIHTPKE++ Y+APA  + P  +V  AP+
Sbjct: 192 WDPKGKLGPMTPLPDVVIIHTPKEDDVYIAPAQVVAPTALVPEAPL 237


>ref|NP_198403.1| 40S ribosomal protein S3-3 [Arabidopsis thaliana]
           gi|75170994|sp|Q9FJA6.1|RS33_ARATH RecName: Full=40S
           ribosomal protein S3-3 gi|9758155|dbj|BAB08712.1| 40S
           ribosomal protein S3 [Arabidopsis thaliana]
           gi|16604318|gb|AAL24165.1| AT5g35530/MOK9_14
           [Arabidopsis thaliana] gi|20466075|gb|AAM19959.1|
           AT5g35530/MOK9_14 [Arabidopsis thaliana]
           gi|332006595|gb|AED93978.1| 40S ribosomal protein S3-3
           [Arabidopsis thaliana]
          Length = 248

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 27/32 (84%), Positives = 30/32 (93%)
 Frame = -3

Query: 380 WDPKGKQGPTTPLPDVVIIHTPKEEETYVAPA 285
           WDPKGKQGP TPLPDVVIIHTPKE++ Y+APA
Sbjct: 192 WDPKGKQGPMTPLPDVVIIHTPKEDDVYIAPA 223


>ref|XP_002281141.2| PREDICTED: 40S ribosomal protein S3-3-like [Vitis vinifera]
           gi|296081703|emb|CBI20708.3| unnamed protein product
           [Vitis vinifera]
          Length = 235

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 31/45 (68%), Positives = 34/45 (75%)
 Frame = -3

Query: 380 WDPKGKQGPTTPLPDVVIIHTPKEEETYVAPALLPVNVVEPAPIL 246
           WDPKGKQGPTTPLPD+V IHTPKEEE YV P L     +E  PI+
Sbjct: 192 WDPKGKQGPTTPLPDLVTIHTPKEEEEYVPPVL--TTNIEVPPIV 234


>dbj|BAH20127.1| AT5G35530 [Arabidopsis thaliana]
          Length = 248

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 27/32 (84%), Positives = 30/32 (93%)
 Frame = -3

Query: 380 WDPKGKQGPTTPLPDVVIIHTPKEEETYVAPA 285
           WDPKGKQGP TPLPDVVIIHTPKE++ Y+APA
Sbjct: 192 WDPKGKQGPMTPLPDVVIIHTPKEDDVYIAPA 223


>ref|XP_004497806.1| PREDICTED: 40S ribosomal protein S3-3-like [Cicer arietinum]
          Length = 237

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 27/40 (67%), Positives = 32/40 (80%)
 Frame = -3

Query: 380 WDPKGKQGPTTPLPDVVIIHTPKEEETYVAPALLPVNVVE 261
           WDPKGKQGP TPLPD+V IH+PKEEE Y+ PA +  N +E
Sbjct: 192 WDPKGKQGPKTPLPDIVTIHSPKEEEEYIRPAAVLANDIE 231


>ref|XP_004497123.1| PREDICTED: 40S ribosomal protein S3-2-like isoform X2 [Cicer
           arietinum]
          Length = 234

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 28/45 (62%), Positives = 35/45 (77%), Gaps = 1/45 (2%)
 Frame = -3

Query: 380 WDPKGKQGPTTPLPDVVIIHTPKEEETYVAP-ALLPVNVVEPAPI 249
           WDPKGKQGP TPLPD+V IH+PKEE+ Y  P A+L  ++  PAP+
Sbjct: 185 WDPKGKQGPKTPLPDIVTIHSPKEEDEYARPAAVLATDIEVPAPV 229


>ref|XP_004497122.1| PREDICTED: 40S ribosomal protein S3-2-like isoform X1 [Cicer
           arietinum]
          Length = 241

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 28/45 (62%), Positives = 35/45 (77%), Gaps = 1/45 (2%)
 Frame = -3

Query: 380 WDPKGKQGPTTPLPDVVIIHTPKEEETYVAP-ALLPVNVVEPAPI 249
           WDPKGKQGP TPLPD+V IH+PKEE+ Y  P A+L  ++  PAP+
Sbjct: 192 WDPKGKQGPKTPLPDIVTIHSPKEEDEYARPAAVLATDIEVPAPV 236


>gb|AFK35364.1| unknown [Lotus japonicus] gi|388504726|gb|AFK40429.1| unknown
           [Lotus japonicus]
          Length = 237

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 27/40 (67%), Positives = 31/40 (77%)
 Frame = -3

Query: 380 WDPKGKQGPTTPLPDVVIIHTPKEEETYVAPALLPVNVVE 261
           WDPKGKQGP TPLPD+V IHTPKEE+ Y+ PA +    VE
Sbjct: 192 WDPKGKQGPKTPLPDIVTIHTPKEEDEYIRPAAVSAEEVE 231


>gb|ACU19393.1| unknown [Glycine max]
          Length = 236

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 28/44 (63%), Positives = 32/44 (72%)
 Frame = -3

Query: 380 WDPKGKQGPTTPLPDVVIIHTPKEEETYVAPALLPVNVVEPAPI 249
           WDPKGKQGP TPLPD+V IHTPKEEE Y  P  +  N +E  P+
Sbjct: 192 WDPKGKQGPKTPLPDLVTIHTPKEEEEYNRPPAVLANDIEVVPV 235


>ref|NP_001239621.1| uncharacterized protein LOC100808705 [Glycine max]
           gi|255641130|gb|ACU20843.1| unknown [Glycine max]
          Length = 236

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 28/44 (63%), Positives = 32/44 (72%)
 Frame = -3

Query: 380 WDPKGKQGPTTPLPDVVIIHTPKEEETYVAPALLPVNVVEPAPI 249
           WDPKGKQGP TPLPD+V IHTPKEEE Y  P  +  N +E  P+
Sbjct: 192 WDPKGKQGPKTPLPDLVTIHTPKEEEEYNRPPAVLANDIEVVPV 235


>ref|XP_006854617.1| hypothetical protein AMTR_s00030p00157370 [Amborella trichopoda]
           gi|548858303|gb|ERN16084.1| hypothetical protein
           AMTR_s00030p00157370 [Amborella trichopoda]
          Length = 233

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 27/34 (79%), Positives = 29/34 (85%)
 Frame = -3

Query: 380 WDPKGKQGPTTPLPDVVIIHTPKEEETYVAPALL 279
           WDPKGKQGPTTPLPD+V IHTPKEEE Y  P L+
Sbjct: 192 WDPKGKQGPTTPLPDLVTIHTPKEEEEYARPPLM 225


>ref|XP_006451562.1| hypothetical protein CICLE_v10009346mg [Citrus clementina]
           gi|568875476|ref|XP_006490820.1| PREDICTED: 40S
           ribosomal protein S3-3-like [Citrus sinensis]
           gi|557554788|gb|ESR64802.1| hypothetical protein
           CICLE_v10009346mg [Citrus clementina]
          Length = 236

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 26/44 (59%), Positives = 33/44 (75%)
 Frame = -3

Query: 380 WDPKGKQGPTTPLPDVVIIHTPKEEETYVAPALLPVNVVEPAPI 249
           WDP GKQGPTTPLPD+V IH+PK+EE YV P L+  ++  P  +
Sbjct: 192 WDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVATDIEVPIQV 235


>ref|XP_003637438.1| 40S ribosomal protein S3 [Medicago truncatula]
           gi|355503373|gb|AES84576.1| 40S ribosomal protein S3
           [Medicago truncatula]
          Length = 237

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 29/41 (70%), Positives = 32/41 (78%), Gaps = 1/41 (2%)
 Frame = -3

Query: 380 WDPKGKQGPTTPLPDVVIIHTPKEEETYVAPA-LLPVNVVE 261
           WDPKGKQGP TPLPD+V IHTPKEEE Y  PA +LP   +E
Sbjct: 192 WDPKGKQGPKTPLPDIVTIHTPKEEEVYNRPATILPTTNIE 232


>ref|XP_003619403.1| 40S ribosomal protein S3 [Medicago truncatula]
           gi|357498233|ref|XP_003619405.1| 40S ribosomal protein
           S3 [Medicago truncatula] gi|355494418|gb|AES75621.1| 40S
           ribosomal protein S3 [Medicago truncatula]
           gi|355494420|gb|AES75623.1| 40S ribosomal protein S3
           [Medicago truncatula]
          Length = 235

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 29/44 (65%), Positives = 32/44 (72%)
 Frame = -3

Query: 380 WDPKGKQGPTTPLPDVVIIHTPKEEETYVAPALLPVNVVEPAPI 249
           WDPKGKQGP TPLPD+V IHTPK+EE Y  PA     VV P P+
Sbjct: 192 WDPKGKQGPKTPLPDIVTIHTPKDEEEYTRPAA----VVAPLPV 231