BLASTX nr result

ID: Rheum21_contig00025894 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00025894
         (526 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531766.1| transcription factor, putative [Ricinus comm...    83   4e-14
gb|AFK33347.1| unknown [Medicago truncatula]                           80   4e-13
ref|XP_004499691.1| PREDICTED: high mobility group B protein 10-...    79   5e-13
gb|AFK40606.1| unknown [Medicago truncatula]                           79   5e-13
ref|XP_003598285.1| AT-rich interactive domain-containing protei...    79   5e-13
gb|EPS65025.1| hypothetical protein M569_09756 [Genlisea aurea]        79   6e-13
gb|EOY11840.1| High mobility group family [Theobroma cacao]            79   6e-13
ref|XP_006373058.1| hypothetical protein POPTR_0017s08230g [Popu...    78   1e-12
gb|EMJ06725.1| hypothetical protein PRUPE_ppa008470mg [Prunus pe...    78   1e-12
ref|XP_002330570.1| high mobility group family [Populus trichoca...    77   2e-12
ref|XP_002264357.1| PREDICTED: high mobility group B protein 10 ...    77   2e-12
ref|XP_006474760.1| PREDICTED: high mobility group B protein 10-...    77   3e-12
ref|XP_006452770.1| hypothetical protein CICLE_v10008919mg [Citr...    77   3e-12
ref|XP_006369803.1| hypothetical protein POPTR_0001s32240g [Popu...    77   3e-12
ref|XP_004497360.1| PREDICTED: high mobility group B protein 15-...    77   3e-12
ref|XP_004294873.1| PREDICTED: high mobility group B protein 10-...    77   3e-12
ref|XP_002300171.1| high mobility group family [Populus trichoca...    77   3e-12
gb|EXB50703.1| High mobility group B protein 10 [Morus notabilis]      76   5e-12
ref|XP_004139006.1| PREDICTED: high mobility group B protein 15-...    75   9e-12
ref|XP_003592799.1| High mobility group protein B3 [Medicago tru...    74   2e-11

>ref|XP_002531766.1| transcription factor, putative [Ricinus communis]
           gi|223528602|gb|EEF30622.1| transcription factor,
           putative [Ricinus communis]
          Length = 313

 Score = 82.8 bits (203), Expect = 4e-14
 Identities = 42/61 (68%), Positives = 47/61 (77%)
 Frame = +1

Query: 343 YPSPEATYEQVVESVQLFIEKLKVFHSSFFGSEIRFPTLGGKELDLHRLFVEVTSRGGLE 522
           YPSP A +E VV+S  LF EKLK FH SF G++   PT+GGK LDLH LFVEVTSRGGLE
Sbjct: 30  YPSPTAQFEDVVQSSDLFWEKLKSFHKSF-GTKFMVPTVGGKALDLHHLFVEVTSRGGLE 88

Query: 523 K 525
           K
Sbjct: 89  K 89


>gb|AFK33347.1| unknown [Medicago truncatula]
          Length = 185

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 38/68 (55%), Positives = 48/68 (70%)
 Frame = +1

Query: 322 SAGNSNVYPSPEATYEQVVESVQLFIEKLKVFHSSFFGSEIRFPTLGGKELDLHRLFVEV 501
           S  N+N YP P A Y  +V    LF +KL+ FH S  G++++ PT+GGK LDLH LFVEV
Sbjct: 22  SKSNTNPYPPPTAPYSDLVRDSNLFQQKLQSFHDSL-GTKLKIPTIGGKSLDLHHLFVEV 80

Query: 502 TSRGGLEK 525
           TSRGG+EK
Sbjct: 81  TSRGGIEK 88


>ref|XP_004499691.1| PREDICTED: high mobility group B protein 10-like isoform X1 [Cicer
           arietinum]
          Length = 313

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 37/65 (56%), Positives = 47/65 (72%)
 Frame = +1

Query: 331 NSNVYPSPEATYEQVVESVQLFIEKLKVFHSSFFGSEIRFPTLGGKELDLHRLFVEVTSR 510
           N N YP P A Y  ++    LF +KL+ FH SF G++++ PT+GGK LDLH LFVEVTSR
Sbjct: 24  NKNPYPPPTAEYNDLIHDPNLFHQKLQSFHDSF-GTKLKIPTIGGKPLDLHHLFVEVTSR 82

Query: 511 GGLEK 525
           GG+EK
Sbjct: 83  GGVEK 87


>gb|AFK40606.1| unknown [Medicago truncatula]
          Length = 234

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 38/68 (55%), Positives = 48/68 (70%)
 Frame = +1

Query: 322 SAGNSNVYPSPEATYEQVVESVQLFIEKLKVFHSSFFGSEIRFPTLGGKELDLHRLFVEV 501
           S  N+N YP P A Y  +V    LF +KL+ FH S  G++++ PT+GGK LDLH LFVEV
Sbjct: 22  SKSNTNPYPPPTAPYSDLVRDSNLFQQKLQSFHDSL-GTKLKIPTIGGKPLDLHHLFVEV 80

Query: 502 TSRGGLEK 525
           TSRGG+EK
Sbjct: 81  TSRGGIEK 88


>ref|XP_003598285.1| AT-rich interactive domain-containing protein [Medicago truncatula]
           gi|355487333|gb|AES68536.1| AT-rich interactive
           domain-containing protein [Medicago truncatula]
          Length = 274

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 38/68 (55%), Positives = 48/68 (70%)
 Frame = +1

Query: 322 SAGNSNVYPSPEATYEQVVESVQLFIEKLKVFHSSFFGSEIRFPTLGGKELDLHRLFVEV 501
           S  N+N YP P A Y  +V    LF +KL+ FH S  G++++ PT+GGK LDLH LFVEV
Sbjct: 22  SKSNTNPYPPPTAPYSDLVRDSNLFQQKLQSFHDSL-GTKLKIPTIGGKPLDLHHLFVEV 80

Query: 502 TSRGGLEK 525
           TSRGG+EK
Sbjct: 81  TSRGGIEK 88


>gb|EPS65025.1| hypothetical protein M569_09756 [Genlisea aurea]
          Length = 300

 Score = 79.0 bits (193), Expect = 6e-13
 Identities = 37/62 (59%), Positives = 50/62 (80%), Gaps = 1/62 (1%)
 Frame = +1

Query: 343 YPSPE-ATYEQVVESVQLFIEKLKVFHSSFFGSEIRFPTLGGKELDLHRLFVEVTSRGGL 519
           YP+PE A Y +++E+ ++F++KL+ FH S+ GS  R PTLGG  LDLH+LFVEVTSRGG+
Sbjct: 15  YPTPEEAAYREIIETPEIFLQKLQDFHLSY-GSRFRIPTLGGNRLDLHQLFVEVTSRGGI 73

Query: 520 EK 525
           EK
Sbjct: 74  EK 75


>gb|EOY11840.1| High mobility group family [Theobroma cacao]
          Length = 310

 Score = 79.0 bits (193), Expect = 6e-13
 Identities = 39/61 (63%), Positives = 44/61 (72%)
 Frame = +1

Query: 343 YPSPEATYEQVVESVQLFIEKLKVFHSSFFGSEIRFPTLGGKELDLHRLFVEVTSRGGLE 522
           YPSP A YE V +S  LF EKLK FH S  G + + P +GGK LDLH+LF EVTSRGGLE
Sbjct: 21  YPSPAAKYEDVAQSSDLFWEKLKAFHKSL-GKKFKVPVVGGKALDLHQLFTEVTSRGGLE 79

Query: 523 K 525
           K
Sbjct: 80  K 80


>ref|XP_006373058.1| hypothetical protein POPTR_0017s08230g [Populus trichocarpa]
           gi|550319757|gb|ERP50855.1| hypothetical protein
           POPTR_0017s08230g [Populus trichocarpa]
          Length = 467

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 37/61 (60%), Positives = 49/61 (80%)
 Frame = +1

Query: 343 YPSPEATYEQVVESVQLFIEKLKVFHSSFFGSEIRFPTLGGKELDLHRLFVEVTSRGGLE 522
           YP+P ATYE V+ S +LF+E L+ FH++  G++   P +GGKEL+LHRLFVEVTSRGG+E
Sbjct: 28  YPAPGATYEDVIVSPKLFMETLEKFHAAM-GTKFMIPIIGGKELNLHRLFVEVTSRGGIE 86

Query: 523 K 525
           K
Sbjct: 87  K 87


>gb|EMJ06725.1| hypothetical protein PRUPE_ppa008470mg [Prunus persica]
          Length = 330

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 41/64 (64%), Positives = 47/64 (73%)
 Frame = +1

Query: 334 SNVYPSPEATYEQVVESVQLFIEKLKVFHSSFFGSEIRFPTLGGKELDLHRLFVEVTSRG 513
           + VYP   A YE+VV+S  LF EKLK FH SF  ++   PT+GGK LDLH LFVEVTSRG
Sbjct: 42  TKVYPPATAKYEEVVQSSDLFWEKLKEFHDSF-RTKFVIPTVGGKALDLHLLFVEVTSRG 100

Query: 514 GLEK 525
           GLEK
Sbjct: 101 GLEK 104


>ref|XP_002330570.1| high mobility group family [Populus trichocarpa]
           gi|566195982|ref|XP_006378007.1| high mobility group
           family protein [Populus trichocarpa]
           gi|550328613|gb|ERP55804.1| high mobility group family
           protein [Populus trichocarpa]
          Length = 316

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 38/61 (62%), Positives = 44/61 (72%)
 Frame = +1

Query: 343 YPSPEATYEQVVESVQLFIEKLKVFHSSFFGSEIRFPTLGGKELDLHRLFVEVTSRGGLE 522
           YP   A YE + +S  LF EKLK FH SF G++   PT+GGK LDLH LFVEVTSRGG+E
Sbjct: 31  YPPATAKYEDIAQSSDLFWEKLKAFHQSF-GTKFMVPTVGGKALDLHHLFVEVTSRGGIE 89

Query: 523 K 525
           K
Sbjct: 90  K 90


>ref|XP_002264357.1| PREDICTED: high mobility group B protein 10 [Vitis vinifera]
           gi|296090037|emb|CBI39856.3| unnamed protein product
           [Vitis vinifera]
          Length = 331

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 39/61 (63%), Positives = 45/61 (73%)
 Frame = +1

Query: 343 YPSPEATYEQVVESVQLFIEKLKVFHSSFFGSEIRFPTLGGKELDLHRLFVEVTSRGGLE 522
           YP   A Y++VV+S  LF + LK FH SF G++   PT GGK LDLHRLFVEVTSRGGLE
Sbjct: 40  YPEAAAQYQEVVQSADLFWQTLKDFHRSF-GTKFMVPTTGGKALDLHRLFVEVTSRGGLE 98

Query: 523 K 525
           K
Sbjct: 99  K 99


>ref|XP_006474760.1| PREDICTED: high mobility group B protein 10-like [Citrus sinensis]
          Length = 326

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 38/64 (59%), Positives = 45/64 (70%)
 Frame = +1

Query: 334 SNVYPSPEATYEQVVESVQLFIEKLKVFHSSFFGSEIRFPTLGGKELDLHRLFVEVTSRG 513
           S+ YP P A YE + +S  LF   L+ FH SF G + + PT+GGK LDLHRLFVEVTSRG
Sbjct: 32  SSYYPPPTAKYEDIAQSSDLFWATLEAFHKSF-GDKFKVPTVGGKALDLHRLFVEVTSRG 90

Query: 514 GLEK 525
           GL K
Sbjct: 91  GLGK 94


>ref|XP_006452770.1| hypothetical protein CICLE_v10008919mg [Citrus clementina]
           gi|557555996|gb|ESR66010.1| hypothetical protein
           CICLE_v10008919mg [Citrus clementina]
          Length = 323

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 38/64 (59%), Positives = 45/64 (70%)
 Frame = +1

Query: 334 SNVYPSPEATYEQVVESVQLFIEKLKVFHSSFFGSEIRFPTLGGKELDLHRLFVEVTSRG 513
           S+ YP P A YE + +S  LF   L+ FH SF G + + PT+GGK LDLHRLFVEVTSRG
Sbjct: 29  SSYYPPPTAKYEDIAQSSDLFWATLEAFHKSF-GDKFKVPTVGGKALDLHRLFVEVTSRG 87

Query: 514 GLEK 525
           GL K
Sbjct: 88  GLGK 91


>ref|XP_006369803.1| hypothetical protein POPTR_0001s32240g [Populus trichocarpa]
           gi|550348694|gb|ERP66372.1| hypothetical protein
           POPTR_0001s32240g [Populus trichocarpa]
          Length = 334

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 36/61 (59%), Positives = 48/61 (78%)
 Frame = +1

Query: 343 YPSPEATYEQVVESVQLFIEKLKVFHSSFFGSEIRFPTLGGKELDLHRLFVEVTSRGGLE 522
           YP+P ATYE V+ S +LF+E L+ FH++  G++   P + GKEL+LHRLFVEVTSRGG+E
Sbjct: 6   YPAPGATYEDVIVSTKLFMETLEKFHAAM-GTKFMIPIIAGKELNLHRLFVEVTSRGGIE 64

Query: 523 K 525
           K
Sbjct: 65  K 65


>ref|XP_004497360.1| PREDICTED: high mobility group B protein 15-like isoform X1 [Cicer
           arietinum] gi|502121541|ref|XP_004497361.1| PREDICTED:
           high mobility group B protein 15-like isoform X2 [Cicer
           arietinum] gi|502121543|ref|XP_004497362.1| PREDICTED:
           high mobility group B protein 15-like isoform X3 [Cicer
           arietinum] gi|502121545|ref|XP_004497363.1| PREDICTED:
           high mobility group B protein 15-like isoform X4 [Cicer
           arietinum] gi|502121547|ref|XP_004497364.1| PREDICTED:
           high mobility group B protein 15-like isoform X5 [Cicer
           arietinum]
          Length = 423

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 36/61 (59%), Positives = 48/61 (78%)
 Frame = +1

Query: 343 YPSPEATYEQVVESVQLFIEKLKVFHSSFFGSEIRFPTLGGKELDLHRLFVEVTSRGGLE 522
           YPSP ATYE+VV++ +LF+  L+  H+   G++   P +GG+ELDLHRLFVEVTSRGG+E
Sbjct: 24  YPSPMATYEEVVDNPKLFMLSLEKLHA-LMGTKFMIPVIGGRELDLHRLFVEVTSRGGIE 82

Query: 523 K 525
           K
Sbjct: 83  K 83


>ref|XP_004294873.1| PREDICTED: high mobility group B protein 10-like [Fragaria vesca
           subsp. vesca]
          Length = 323

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 39/64 (60%), Positives = 46/64 (71%)
 Frame = +1

Query: 334 SNVYPSPEATYEQVVESVQLFIEKLKVFHSSFFGSEIRFPTLGGKELDLHRLFVEVTSRG 513
           S VYP P A +  VV+S  LF  KLK FH+S  G++   PT+GGK LDLH LFVEVTSRG
Sbjct: 42  SKVYPPPSAEFGDVVQSSDLFWHKLKEFHASL-GTKFMIPTVGGKTLDLHLLFVEVTSRG 100

Query: 514 GLEK 525
           G+EK
Sbjct: 101 GIEK 104


>ref|XP_002300171.1| high mobility group family [Populus trichocarpa]
          Length = 348

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 36/61 (59%), Positives = 48/61 (78%)
 Frame = +1

Query: 343 YPSPEATYEQVVESVQLFIEKLKVFHSSFFGSEIRFPTLGGKELDLHRLFVEVTSRGGLE 522
           YP+P ATYE V+ S +LF+E L+ FH++  G++   P + GKEL+LHRLFVEVTSRGG+E
Sbjct: 3   YPAPGATYEDVIVSTKLFMETLEKFHAAM-GTKFMIPIIAGKELNLHRLFVEVTSRGGIE 61

Query: 523 K 525
           K
Sbjct: 62  K 62


>gb|EXB50703.1| High mobility group B protein 10 [Morus notabilis]
          Length = 320

 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 41/68 (60%), Positives = 49/68 (72%)
 Frame = +1

Query: 322 SAGNSNVYPSPEATYEQVVESVQLFIEKLKVFHSSFFGSEIRFPTLGGKELDLHRLFVEV 501
           S+ + N   S  A YE VV+S  LF EKL+ FH+SF  ++   PT+GGK LDLHRLFVEV
Sbjct: 23  SSISENGSSSAAAKYEDVVQSSDLFWEKLRAFHNSF-RTKFTIPTVGGKALDLHRLFVEV 81

Query: 502 TSRGGLEK 525
           TSRGGLEK
Sbjct: 82  TSRGGLEK 89


>ref|XP_004139006.1| PREDICTED: high mobility group B protein 15-like [Cucumis sativus]
           gi|449530303|ref|XP_004172135.1| PREDICTED: high
           mobility group B protein 15-like [Cucumis sativus]
          Length = 491

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 35/67 (52%), Positives = 47/67 (70%)
 Frame = +1

Query: 325 AGNSNVYPSPEATYEQVVESVQLFIEKLKVFHSSFFGSEIRFPTLGGKELDLHRLFVEVT 504
           A N   YP P+ TYE ++ + ++F+  L+  HS   G++   P +GGKELDLHRLFVEVT
Sbjct: 18  ASNCVPYPPPQTTYEDIIANSKIFMTALEKLHS-LMGTKFMIPIIGGKELDLHRLFVEVT 76

Query: 505 SRGGLEK 525
           SRGG+EK
Sbjct: 77  SRGGIEK 83


>ref|XP_003592799.1| High mobility group protein B3 [Medicago truncatula]
           gi|355481847|gb|AES63050.1| High mobility group protein
           B3 [Medicago truncatula]
          Length = 417

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 36/61 (59%), Positives = 46/61 (75%)
 Frame = +1

Query: 343 YPSPEATYEQVVESVQLFIEKLKVFHSSFFGSEIRFPTLGGKELDLHRLFVEVTSRGGLE 522
           YP P ATYE+VV++ +LFI  L+  H+   G++   P +GG+ELDLHRLFVEVTSRGG E
Sbjct: 24  YPPPMATYEEVVDNPKLFILCLEKLHT-LMGTKFMIPVIGGRELDLHRLFVEVTSRGGFE 82

Query: 523 K 525
           K
Sbjct: 83  K 83


Top