BLASTX nr result

ID: Rheum21_contig00025654 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00025654
         (509 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004496553.1| PREDICTED: 60S ribosomal protein L36-2-like ...    57   3e-06
gb|EMJ07364.1| hypothetical protein PRUPE_ppa013654mg [Prunus pe...    56   6e-06
gb|EMJ19827.1| hypothetical protein PRUPE_ppa013641mg [Prunus pe...    55   1e-05
pir||T14304 ribosomal protein - carrot (fragment) gi|1276967|gb|...    55   1e-05
gb|AFK43005.1| unknown [Lotus japonicus]                               55   1e-05
gb|AFK38454.1| unknown [Lotus japonicus]                               55   1e-05

>ref|XP_004496553.1| PREDICTED: 60S ribosomal protein L36-2-like [Cicer arietinum]
           gi|502128416|ref|XP_004499956.1| PREDICTED: 60S
           ribosomal protein L36-2-like [Cicer arietinum]
           gi|502151759|ref|XP_004508599.1| PREDICTED: 60S
           ribosomal protein L36-2-like isoform X1 [Cicer
           arietinum] gi|502151761|ref|XP_004508600.1| PREDICTED:
           60S ribosomal protein L36-2-like isoform X2 [Cicer
           arietinum] gi|502157934|ref|XP_004510961.1| PREDICTED:
           60S ribosomal protein L36-3-like isoform X2 [Cicer
           arietinum]
          Length = 110

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 25/42 (59%), Positives = 30/42 (71%)
 Frame = +2

Query: 374 RRPAEAFFVGLNKSHIVTKNELAPRPSDRKGICCLSIHCTRN 499
           ++P+   FVGLNK H+VTK ELAPRPSDRKG     +H  RN
Sbjct: 4   KQPSTGLFVGLNKGHVVTKKELAPRPSDRKGKTSKRVHFVRN 45


>gb|EMJ07364.1| hypothetical protein PRUPE_ppa013654mg [Prunus persica]
          Length = 110

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 26/40 (65%), Positives = 27/40 (67%)
 Frame = +2

Query: 380 PAEAFFVGLNKSHIVTKNELAPRPSDRKGICCLSIHCTRN 499
           P    FVGLNK HIVTK ELAPRPSDRKG     +H  RN
Sbjct: 6   PKSGIFVGLNKGHIVTKRELAPRPSDRKGKTSKRVHFVRN 45


>gb|EMJ19827.1| hypothetical protein PRUPE_ppa013641mg [Prunus persica]
          Length = 111

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 25/42 (59%), Positives = 29/42 (69%)
 Frame = +2

Query: 374 RRPAEAFFVGLNKSHIVTKNELAPRPSDRKGICCLSIHCTRN 499
           ++P    FVGLNK HIVT+ ELAPRPSDRKG     +H  RN
Sbjct: 4   KQPNTGIFVGLNKGHIVTRKELAPRPSDRKGKTSKRVHFVRN 45


>pir||T14304 ribosomal protein - carrot (fragment) gi|1276967|gb|AAB01095.1|
           putative ribosomal protein, partial [Daucus carota]
          Length = 111

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 27/46 (58%), Positives = 30/46 (65%)
 Frame = +2

Query: 362 SMDLRRPAEAFFVGLNKSHIVTKNELAPRPSDRKGICCLSIHCTRN 499
           +M  ++P    FVGLNK HIVTK ELAPRPSDRKG      H  RN
Sbjct: 5   NMAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRTHFVRN 50


>gb|AFK43005.1| unknown [Lotus japonicus]
          Length = 111

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 24/42 (57%), Positives = 30/42 (71%)
 Frame = +2

Query: 374 RRPAEAFFVGLNKSHIVTKNELAPRPSDRKGICCLSIHCTRN 499
           ++P+   FVGLNK H+VTK ELAPRPSDRKG     +H  R+
Sbjct: 4   KQPSTGLFVGLNKGHVVTKKELAPRPSDRKGKTSKRVHFVRS 45


>gb|AFK38454.1| unknown [Lotus japonicus]
          Length = 110

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 24/42 (57%), Positives = 30/42 (71%)
 Frame = +2

Query: 374 RRPAEAFFVGLNKSHIVTKNELAPRPSDRKGICCLSIHCTRN 499
           ++P+   FVGLNK H+VTK ELAPRPSDRKG     +H  R+
Sbjct: 4   KQPSTGLFVGLNKGHVVTKKELAPRPSDRKGKTSKRVHFVRS 45


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