BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00025554
         (320 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADV40117.1| putative E3 ubiquitin ligase [Latrodectus hesperus]     58   1e-06
ref|XP_003628487.1| Cellular nucleic acid-binding protein [Medic...    57   3e-06

>gb|ADV40117.1| putative E3 ubiquitin ligase [Latrodectus hesperus]
          Length = 175

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 30/84 (35%), Positives = 43/84 (51%)
 Frame = +3

Query: 39  QAGGFKRPAPPSDFAKSGRARTDKAPEKSLRHSGQAKGSVQCYNCGVAGHKSTECQKEKK 218
           ++G F R  P  D  + G  R D       R S +A     CYNCG +GH + EC++  K
Sbjct: 11  KSGHFARDCPSGDGGRGGGYRGDS------RSSSRAS----CYNCGRSGHFARECRESDK 60

Query: 219 TCFGCGREGHQQRFYLKGQPKGAE 290
           TC+ CG+ GH  R   +G   G++
Sbjct: 61  TCYSCGKSGHISRDCTQGGGGGSD 84


>ref|XP_003628487.1| Cellular nucleic acid-binding protein [Medicago truncatula]
           gi|355522509|gb|AET02963.1| Cellular nucleic
           acid-binding protein [Medicago truncatula]
          Length = 544

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 28/81 (34%), Positives = 41/81 (50%)
 Frame = +3

Query: 6   RESQRQVQNQSQAGGFKRPAPPSDFAKSGRARTDKAPEKSLRHSGQAKGSVQCYNCGVAG 185
           ++  + +  +S  G   RP P S  A  G+ R +     + R    A   + CY CG  G
Sbjct: 194 KDHYKVMSERSGKGQQSRPKPYSAPADKGKQRLNDERRPNRR---DAPAEIVCYKCGDKG 250

Query: 186 HKSTECQKEKKTCFGCGREGH 248
           HKS  C K++K CF CG++GH
Sbjct: 251 HKSNVCTKDEKKCFRCGQKGH 271