BLASTX nr result

ID: Rheum21_contig00025382 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00025382
         (541 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300361.2| CBS domain-containing family protein [Populu...    60   3e-07
gb|EMJ14793.1| hypothetical protein PRUPE_ppa002455mg [Prunus pe...    59   1e-06
gb|EXB96351.1| hypothetical protein L484_023070 [Morus notabilis]      58   1e-06
gb|EXB67418.1| DUF21 domain-containing protein [Morus notabilis]       58   1e-06
ref|XP_004294465.1| PREDICTED: DUF21 domain-containing protein A...    57   4e-06

>ref|XP_002300361.2| CBS domain-containing family protein [Populus trichocarpa]
           gi|550349088|gb|EEE85166.2| CBS domain-containing family
           protein [Populus trichocarpa]
          Length = 448

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 47/139 (33%), Positives = 64/139 (46%), Gaps = 1/139 (0%)
 Frame = -1

Query: 469 SRMPVKISSR-IAYRPFITNCMKKTVFVSSFTSVTPQNRCLQCLNYRNHGRLVLGDGTQG 293
           S++P K+S +   Y P I++  K T F    +S+ P+NR     N        LG     
Sbjct: 33  SKIPFKVSQKSYQYPPRISS--KLTDFRPYCSSILPRNRSKSSRNVSTD----LGTDQN- 85

Query: 292 QTXXXXXXXXXXXXXFKVMIKXXXXXXXXXXXXXVFQCQRATAVEGAVNKAYDVVEHSML 113
                           KV++K             VF C+R  A EG VN  Y V+  S+L
Sbjct: 86  ----------VNLELIKVLLKRGVVFGAMVCGVLVFGCRRVLASEGVVNAGYGVIGQSIL 135

Query: 112 LLKNAWPKILQLLQVIREQ 56
           LL+NAWPKI QLL+V +EQ
Sbjct: 136 LLRNAWPKISQLLRVFKEQ 154


>gb|EMJ14793.1| hypothetical protein PRUPE_ppa002455mg [Prunus persica]
          Length = 671

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 26/44 (59%), Positives = 34/44 (77%)
 Frame = -1

Query: 187 FQCQRATAVEGAVNKAYDVVEHSMLLLKNAWPKILQLLQVIREQ 56
           + C+RA AVEG VN  Y V+  S+LLL+NAWPK LQ+LQ+ +EQ
Sbjct: 120 YGCRRAFAVEGVVNAGYGVIGQSILLLRNAWPKTLQVLQLFKEQ 163


>gb|EXB96351.1| hypothetical protein L484_023070 [Morus notabilis]
          Length = 358

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 26/44 (59%), Positives = 33/44 (75%)
 Frame = -1

Query: 187 FQCQRATAVEGAVNKAYDVVEHSMLLLKNAWPKILQLLQVIREQ 56
           + C+RA A EG VN  Y V+  S+LLL+NAWPK LQ+LQV +EQ
Sbjct: 113 YGCKRAFATEGVVNAGYGVIGQSILLLRNAWPKTLQVLQVFKEQ 156


>gb|EXB67418.1| DUF21 domain-containing protein [Morus notabilis]
          Length = 659

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 26/44 (59%), Positives = 33/44 (75%)
 Frame = -1

Query: 187 FQCQRATAVEGAVNKAYDVVEHSMLLLKNAWPKILQLLQVIREQ 56
           + C+RA A EG VN  Y V+  S+LLL+NAWPK LQ+LQV +EQ
Sbjct: 113 YGCKRAFATEGVVNAGYGVIGQSILLLRNAWPKTLQVLQVFKEQ 156


>ref|XP_004294465.1| PREDICTED: DUF21 domain-containing protein At1g55930,
           chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 665

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 29/63 (46%), Positives = 40/63 (63%)
 Frame = -1

Query: 244 KVMIKXXXXXXXXXXXXXVFQCQRATAVEGAVNKAYDVVEHSMLLLKNAWPKILQLLQVI 65
           KVM+K             V+  +RA AVEG V+ +Y VV+ S+L+ +NAWPK LQ+LQV 
Sbjct: 101 KVMVKCGVVLAAMVCGVLVYGSRRAFAVEGVVSASYGVVDKSILMFRNAWPKTLQVLQVF 160

Query: 64  REQ 56
           +EQ
Sbjct: 161 KEQ 163


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