BLASTX nr result
ID: Rheum21_contig00025341
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00025341
(215 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMJ16089.1| hypothetical protein PRUPE_ppa001014mg [Prunus pe... 87 2e-15
emb|CAN73858.1| hypothetical protein VITISV_024322 [Vitis vinifera] 86 5e-15
ref|XP_004305676.1| PREDICTED: putative pentatricopeptide repeat... 84 3e-14
ref|XP_002268817.2| PREDICTED: putative pentatricopeptide repeat... 84 3e-14
ref|XP_002530214.1| pentatricopeptide repeat-containing protein,... 84 3e-14
gb|EXB70651.1| hypothetical protein L484_023837 [Morus notabilis] 83 3e-14
gb|EOX93509.1| Tetratricopeptide repeat-like superfamily protein... 82 1e-13
ref|XP_003545066.1| PREDICTED: putative pentatricopeptide repeat... 81 2e-13
gb|ESW14531.1| hypothetical protein PHAVU_008G289100g [Phaseolus... 80 4e-13
ref|XP_004491623.1| PREDICTED: putative pentatricopeptide repeat... 79 8e-13
ref|XP_006376468.1| hypothetical protein POPTR_0013s13270g [Popu... 78 1e-12
ref|XP_003609218.1| Pentatricopeptide repeat-containing protein ... 78 1e-12
ref|XP_006447804.1| hypothetical protein CICLE_v10017893mg [Citr... 77 3e-12
ref|XP_002330643.1| predicted protein [Populus trichocarpa] 77 3e-12
ref|XP_004144619.1| PREDICTED: putative pentatricopeptide repeat... 75 9e-12
ref|XP_006357638.1| PREDICTED: putative pentatricopeptide repeat... 74 2e-11
gb|EPS62296.1| hypothetical protein M569_12493 [Genlisea aurea] 74 2e-11
ref|XP_004243876.1| PREDICTED: putative pentatricopeptide repeat... 74 2e-11
ref|XP_006376473.1| hypothetical protein POPTR_0013s13310g [Popu... 72 6e-11
ref|XP_006397508.1| hypothetical protein EUTSA_v10001296mg [Eutr... 71 1e-10
>gb|EMJ16089.1| hypothetical protein PRUPE_ppa001014mg [Prunus persica]
Length = 934
Score = 87.4 bits (215), Expect = 2e-15
Identities = 42/57 (73%), Positives = 50/57 (87%)
Frame = +2
Query: 44 ILDQMLARVQKSGFLSDLYVGSALVSGYARFGLIDYARRILEQLSLKNAVSVNGLMV 214
+L Q+L RV KSG L DLYVGSALVSG+ARFGLIDYAR+I EQ+S +NA+S+NGLMV
Sbjct: 169 LLQQILTRVNKSGILQDLYVGSALVSGFARFGLIDYARKIFEQMSERNAISMNGLMV 225
>emb|CAN73858.1| hypothetical protein VITISV_024322 [Vitis vinifera]
Length = 1539
Score = 85.9 bits (211), Expect = 5e-15
Identities = 41/57 (71%), Positives = 50/57 (87%)
Frame = +2
Query: 44 ILDQMLARVQKSGFLSDLYVGSALVSGYARFGLIDYARRILEQLSLKNAVSVNGLMV 214
+L+QMLARV+KSGFL DLYVGSALVSG+ARFGL D A+ I EQ+ ++N VS+NGLMV
Sbjct: 773 VLEQMLARVEKSGFLQDLYVGSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMV 829
>ref|XP_004305676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Fragaria vesca subsp. vesca]
Length = 1043
Score = 83.6 bits (205), Expect = 3e-14
Identities = 40/57 (70%), Positives = 49/57 (85%)
Frame = +2
Query: 44 ILDQMLARVQKSGFLSDLYVGSALVSGYARFGLIDYARRILEQLSLKNAVSVNGLMV 214
+L QML+RV K+GFL DLYVGSALVSG+AR GL+DYAR+I EQ+ +N VS+NGLMV
Sbjct: 278 LLQQMLSRVCKAGFLGDLYVGSALVSGFARVGLVDYARKIFEQMGERNVVSMNGLMV 334
>ref|XP_002268817.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1736
Score = 83.6 bits (205), Expect = 3e-14
Identities = 40/57 (70%), Positives = 49/57 (85%)
Frame = +2
Query: 44 ILDQMLARVQKSGFLSDLYVGSALVSGYARFGLIDYARRILEQLSLKNAVSVNGLMV 214
+L+QMLARV+KSGFL DLYV SALVSG+ARFGL D A+ I EQ+ ++N VS+NGLMV
Sbjct: 300 VLEQMLARVEKSGFLQDLYVSSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMV 356
>ref|XP_002530214.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223530261|gb|EEF32161.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 834
Score = 83.6 bits (205), Expect = 3e-14
Identities = 38/57 (66%), Positives = 50/57 (87%)
Frame = +2
Query: 44 ILDQMLARVQKSGFLSDLYVGSALVSGYARFGLIDYARRILEQLSLKNAVSVNGLMV 214
+L+QML V+KSG LSD+YVGSALVSG++RFGL DYA++I EQ+ ++NAVS+N LMV
Sbjct: 164 LLEQMLTMVEKSGLLSDMYVGSALVSGFSRFGLFDYAKKIFEQMGMRNAVSMNSLMV 220
>gb|EXB70651.1| hypothetical protein L484_023837 [Morus notabilis]
Length = 1398
Score = 83.2 bits (204), Expect = 3e-14
Identities = 40/57 (70%), Positives = 53/57 (92%)
Frame = +2
Query: 44 ILDQMLARVQKSGFLSDLYVGSALVSGYARFGLIDYARRILEQLSLKNAVSVNGLMV 214
+L+QMLARV+KSGFL+DLYVGSALVSG+++FGL++YA +I EQ+S N+VS+NGLMV
Sbjct: 306 LLEQMLARVKKSGFLNDLYVGSALVSGFSKFGLLNYALKISEQMSEINSVSMNGLMV 362
>gb|EOX93509.1| Tetratricopeptide repeat-like superfamily protein [Theobroma cacao]
Length = 1161
Score = 81.6 bits (200), Expect = 1e-13
Identities = 40/57 (70%), Positives = 49/57 (85%)
Frame = +2
Query: 44 ILDQMLARVQKSGFLSDLYVGSALVSGYARFGLIDYARRILEQLSLKNAVSVNGLMV 214
+L QML+R+ KSGFLSDLYVGSALVSG+AR GL +YA +I Q+S +NAVS+NGLMV
Sbjct: 311 LLQQMLSRITKSGFLSDLYVGSALVSGFARLGLSNYAMKIFGQMSQRNAVSMNGLMV 367
>ref|XP_003545066.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Glycine max]
Length = 1033
Score = 80.9 bits (198), Expect = 2e-13
Identities = 38/57 (66%), Positives = 50/57 (87%)
Frame = +2
Query: 44 ILDQMLARVQKSGFLSDLYVGSALVSGYARFGLIDYARRILEQLSLKNAVSVNGLMV 214
+L+QMLAR++KS F+ DLYVGSALVSG+AR+GLID A+ I EQ+ +NAV++NGLMV
Sbjct: 268 LLEQMLARIEKSSFVKDLYVGSALVSGFARYGLIDSAKMIFEQMDDRNAVTMNGLMV 324
>gb|ESW14531.1| hypothetical protein PHAVU_008G289100g [Phaseolus vulgaris]
Length = 1030
Score = 79.7 bits (195), Expect = 4e-13
Identities = 38/57 (66%), Positives = 50/57 (87%)
Frame = +2
Query: 44 ILDQMLARVQKSGFLSDLYVGSALVSGYARFGLIDYARRILEQLSLKNAVSVNGLMV 214
+L+QMLAR++KS F+ DLYVGSALVSG+A+ GLID A+ I EQ+S +NAV++NGLMV
Sbjct: 265 LLEQMLARIEKSSFVQDLYVGSALVSGFAKHGLIDSAKMIFEQMSDRNAVTMNGLMV 321
>ref|XP_004491623.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cicer arietinum]
Length = 1030
Score = 78.6 bits (192), Expect = 8e-13
Identities = 36/57 (63%), Positives = 50/57 (87%)
Frame = +2
Query: 44 ILDQMLARVQKSGFLSDLYVGSALVSGYARFGLIDYARRILEQLSLKNAVSVNGLMV 214
+L+QML R++KSGF+ DLYVGSALV+G+AR+GL+D A+ I EQ+ +NAV++NGLMV
Sbjct: 265 VLEQMLTRIEKSGFVHDLYVGSALVNGFARYGLMDCAKMIFEQMYDRNAVTMNGLMV 321
>ref|XP_006376468.1| hypothetical protein POPTR_0013s13270g [Populus trichocarpa]
gi|550325744|gb|ERP54265.1| hypothetical protein
POPTR_0013s13270g [Populus trichocarpa]
Length = 934
Score = 78.2 bits (191), Expect = 1e-12
Identities = 36/57 (63%), Positives = 49/57 (85%)
Frame = +2
Query: 44 ILDQMLARVQKSGFLSDLYVGSALVSGYARFGLIDYARRILEQLSLKNAVSVNGLMV 214
+L Q+LAR++KSG L++LYVGSALV G++R G DYAR+I EQ++ +NAVS+NGLMV
Sbjct: 169 LLGQILARIKKSGLLANLYVGSALVGGFSRLGSFDYARKIFEQMTARNAVSMNGLMV 225
>ref|XP_003609218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510273|gb|AES91415.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 1134
Score = 77.8 bits (190), Expect = 1e-12
Identities = 36/57 (63%), Positives = 50/57 (87%)
Frame = +2
Query: 44 ILDQMLARVQKSGFLSDLYVGSALVSGYARFGLIDYARRILEQLSLKNAVSVNGLMV 214
+L+QML R++KSGFL DLYVGSALV+G+AR+GL+D A+ I +Q+ +NAV++NGLMV
Sbjct: 369 LLEQMLTRIEKSGFLRDLYVGSALVNGFARYGLMDCAKMIFKQMYDRNAVTMNGLMV 425
>ref|XP_006447804.1| hypothetical protein CICLE_v10017893mg [Citrus clementina]
gi|568830346|ref|XP_006469462.1| PREDICTED: putative
pentatricopeptide repeat-containing protein
At5g09950-like [Citrus sinensis]
gi|557550415|gb|ESR61044.1| hypothetical protein
CICLE_v10017893mg [Citrus clementina]
Length = 1057
Score = 76.6 bits (187), Expect = 3e-12
Identities = 38/58 (65%), Positives = 47/58 (81%)
Frame = +2
Query: 41 FILDQMLARVQKSGFLSDLYVGSALVSGYARFGLIDYARRILEQLSLKNAVSVNGLMV 214
++L Q+LA V+K+G LSDLYVGSALVSG+AR G YAR+I EQ+ KN VS+NGLMV
Sbjct: 292 YLLQQILAMVKKAGLLSDLYVGSALVSGFARLGNFYYARKIFEQMIQKNVVSMNGLMV 349
>ref|XP_002330643.1| predicted protein [Populus trichocarpa]
Length = 777
Score = 76.6 bits (187), Expect = 3e-12
Identities = 35/57 (61%), Positives = 48/57 (84%)
Frame = +2
Query: 44 ILDQMLARVQKSGFLSDLYVGSALVSGYARFGLIDYARRILEQLSLKNAVSVNGLMV 214
+L Q+LAR++KSG L++LYVGSAL G++R G DYAR+I EQ++ +NAVS+NGLMV
Sbjct: 169 LLGQILARIKKSGLLANLYVGSALAGGFSRLGSFDYARKIFEQMTARNAVSMNGLMV 225
>ref|XP_004144619.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
gi|449506934|ref|XP_004162888.1| PREDICTED: putative
pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 1067
Score = 75.1 bits (183), Expect = 9e-12
Identities = 34/57 (59%), Positives = 48/57 (84%)
Frame = +2
Query: 44 ILDQMLARVQKSGFLSDLYVGSALVSGYARFGLIDYARRILEQLSLKNAVSVNGLMV 214
+L+Q+L RV+KSGFL DLYVGSALVSG+A+ G I YA+ I +++S +N VS+NGL++
Sbjct: 302 LLEQLLTRVEKSGFLHDLYVGSALVSGFAKAGSIGYAKNIFQKMSYRNVVSLNGLII 358
>ref|XP_006357638.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Solanum tuberosum]
Length = 1086
Score = 74.3 bits (181), Expect = 2e-11
Identities = 33/57 (57%), Positives = 47/57 (82%)
Frame = +2
Query: 44 ILDQMLARVQKSGFLSDLYVGSALVSGYARFGLIDYARRILEQLSLKNAVSVNGLMV 214
+L+Q+LA ++KSG L DLYVGSAL+SG+ RFG +D A ++ +Q+ +NAVS+NGLMV
Sbjct: 321 LLEQLLANIEKSGLLEDLYVGSALLSGFGRFGSLDTALKVFKQMGARNAVSLNGLMV 377
>gb|EPS62296.1| hypothetical protein M569_12493 [Genlisea aurea]
Length = 1061
Score = 74.3 bits (181), Expect = 2e-11
Identities = 33/57 (57%), Positives = 47/57 (82%)
Frame = +2
Query: 44 ILDQMLARVQKSGFLSDLYVGSALVSGYARFGLIDYARRILEQLSLKNAVSVNGLMV 214
+L+Q+LAR++ SGF DLYVGSALV+G+AR G +D A+++ + +KNAVS+NGLMV
Sbjct: 293 LLEQLLARIEMSGFSQDLYVGSALVNGFARCGAVDAAKKVFRHMGVKNAVSLNGLMV 349
>ref|XP_004243876.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Solanum lycopersicum]
Length = 1086
Score = 74.3 bits (181), Expect = 2e-11
Identities = 33/57 (57%), Positives = 47/57 (82%)
Frame = +2
Query: 44 ILDQMLARVQKSGFLSDLYVGSALVSGYARFGLIDYARRILEQLSLKNAVSVNGLMV 214
+L+Q+LA ++KSG L DLYVGSAL+SG+ RFG +D A ++ +Q+ +NAVS+NGLMV
Sbjct: 321 LLEQLLANIEKSGLLEDLYVGSALLSGFGRFGSLDTALKVFKQMGARNAVSLNGLMV 377
>ref|XP_006376473.1| hypothetical protein POPTR_0013s13310g [Populus trichocarpa]
gi|550325749|gb|ERP54270.1| hypothetical protein
POPTR_0013s13310g [Populus trichocarpa]
Length = 909
Score = 72.4 bits (176), Expect = 6e-11
Identities = 33/57 (57%), Positives = 46/57 (80%)
Frame = +2
Query: 44 ILDQMLARVQKSGFLSDLYVGSALVSGYARFGLIDYARRILEQLSLKNAVSVNGLMV 214
+L Q+LAR++KSG L++LYVGSAL G +R G DYAR+I EQ++ +N V++NGLMV
Sbjct: 301 LLGQILARIKKSGLLANLYVGSALAGGLSRLGSFDYARKIFEQMTARNVVAMNGLMV 357
>ref|XP_006397508.1| hypothetical protein EUTSA_v10001296mg [Eutrema salsugineum]
gi|557098581|gb|ESQ38961.1| hypothetical protein
EUTSA_v10001296mg [Eutrema salsugineum]
Length = 934
Score = 71.2 bits (173), Expect = 1e-10
Identities = 32/57 (56%), Positives = 45/57 (78%)
Frame = +2
Query: 44 ILDQMLARVQKSGFLSDLYVGSALVSGYARFGLIDYARRILEQLSLKNAVSVNGLMV 214
+L Q++ +QKSGFLSDL+VGS LVS +A+ G + YAR+I Q+ +NAV++NGLMV
Sbjct: 165 LLQQIMCTIQKSGFLSDLFVGSGLVSAFAKSGSLSYARKIFNQMETRNAVTLNGLMV 221