BLASTX nr result
ID: Rheum21_contig00025329
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00025329
(544 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002530529.1| RNA binding protein, putative [Ricinus commu... 150 1e-34
ref|NP_001238370.1| uncharacterized protein LOC100527079 [Glycin... 144 1e-32
gb|EMJ05001.1| hypothetical protein PRUPE_ppa026345mg [Prunus pe... 143 2e-32
ref|XP_004303523.1| PREDICTED: glycine-rich RNA-binding protein ... 139 3e-31
ref|XP_006339140.1| PREDICTED: glycine-rich RNA-binding protein ... 139 4e-31
ref|XP_004249429.1| PREDICTED: cold-inducible RNA-binding protei... 138 7e-31
ref|XP_004149190.1| PREDICTED: glycine-rich RNA-binding protein ... 138 1e-30
ref|XP_006430132.1| hypothetical protein CICLE_v10012994mg [Citr... 137 1e-30
gb|EPS58767.1| hypothetical protein M569_16047 [Genlisea aurea] 137 2e-30
ref|XP_002309412.1| predicted protein [Populus trichocarpa] gi|5... 137 2e-30
ref|XP_002276063.2| PREDICTED: glycine-rich RNA-binding protein ... 136 4e-30
ref|XP_006481717.1| PREDICTED: glycine-rich RNA-binding protein ... 135 5e-30
gb|ESW34930.1| hypothetical protein PHAVU_001G192800g [Phaseolus... 135 6e-30
ref|XP_004161215.1| PREDICTED: glycine-rich RNA-binding protein ... 135 6e-30
gb|EXB54608.1| Cold-inducible RNA-binding protein [Morus notabilis] 135 8e-30
ref|XP_006399088.1| hypothetical protein EUTSA_v10014928mg [Eutr... 126 4e-27
ref|XP_006430131.1| hypothetical protein CICLE_v10012994mg [Citr... 125 8e-27
gb|EOY08348.1| RNA binding family protein isoform 1 [Theobroma c... 125 8e-27
gb|AFK39402.1| unknown [Medicago truncatula] 124 1e-26
ref|XP_006481718.1| PREDICTED: glycine-rich RNA-binding protein ... 123 3e-26
>ref|XP_002530529.1| RNA binding protein, putative [Ricinus communis]
gi|223529933|gb|EEF31861.1| RNA binding protein,
putative [Ricinus communis]
Length = 127
Score = 150 bits (380), Expect = 1e-34
Identities = 73/103 (70%), Positives = 88/103 (85%)
Frame = -2
Query: 348 ISRRGIAFKLFVKGLSFYTSDKGLEEAFSQYGQVVEAKVVSDQATDRSKGFGFVTFASEE 169
+S RGIA KLFV GLSFYT+DKGL EAFSQYGQVVEA +VSD+ DRSKGFGFVTFASE+
Sbjct: 24 VSYRGIATKLFVGGLSFYTTDKGLTEAFSQYGQVVEATIVSDRVLDRSKGFGFVTFASED 83
Query: 168 EAHRALNDMHGKVLHGRVLAVEFAKMRYQPRVDIPIARGPPDP 40
EAH AL++M+GK L+GRV+ V++AK R R ++PIARGPP+P
Sbjct: 84 EAHNALSEMNGKTLNGRVIYVDYAKPRTDSRNEVPIARGPPEP 126
>ref|NP_001238370.1| uncharacterized protein LOC100527079 [Glycine max]
gi|255631508|gb|ACU16121.1| unknown [Glycine max]
Length = 130
Score = 144 bits (364), Expect = 1e-32
Identities = 68/106 (64%), Positives = 85/106 (80%)
Frame = -2
Query: 342 RRGIAFKLFVKGLSFYTSDKGLEEAFSQYGQVVEAKVVSDQATDRSKGFGFVTFASEEEA 163
RRGIA+KLFV GLSFYT++ L EAFS YGQV+EAK+V+D+ +DRSKGFGFVTFAS++EA
Sbjct: 24 RRGIAYKLFVGGLSFYTTENALSEAFSNYGQVIEAKIVTDRVSDRSKGFGFVTFASQDEA 83
Query: 162 HRALNDMHGKVLHGRVLAVEFAKMRYQPRVDIPIARGPPDPPKTAD 25
A+ DM GK L+GRV+ V++AK R +IPIARGPP+P T D
Sbjct: 84 ENAIEDMKGKTLNGRVIFVDYAKPNINTRGEIPIARGPPEPTSTPD 129
>gb|EMJ05001.1| hypothetical protein PRUPE_ppa026345mg [Prunus persica]
Length = 132
Score = 143 bits (361), Expect = 2e-32
Identities = 70/106 (66%), Positives = 88/106 (83%)
Frame = -2
Query: 351 LISRRGIAFKLFVKGLSFYTSDKGLEEAFSQYGQVVEAKVVSDQATDRSKGFGFVTFASE 172
LIS RG+ KLFV GLSFYT+DKGL EAFSQYGQV+EA++V+D+ +DRSKGFGFVTFASE
Sbjct: 25 LISCRGLTTKLFVGGLSFYTNDKGLSEAFSQYGQVIEAQIVTDRVSDRSKGFGFVTFASE 84
Query: 171 EEAHRALNDMHGKVLHGRVLAVEFAKMRYQPRVDIPIARGPPDPPK 34
+EAH+AL +M+GK L+GRV+ V++AK + +PIARGPPD K
Sbjct: 85 DEAHKALEEMNGKALNGRVIFVDYAKPKANYGGGMPIARGPPDTIK 130
>ref|XP_004303523.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Fragaria vesca subsp. vesca]
Length = 133
Score = 139 bits (351), Expect = 3e-31
Identities = 68/103 (66%), Positives = 88/103 (85%)
Frame = -2
Query: 351 LISRRGIAFKLFVKGLSFYTSDKGLEEAFSQYGQVVEAKVVSDQATDRSKGFGFVTFASE 172
LIS R ++ KLFV GLSFYT+DKGL+EAFSQYGQVVEA+VVSD+ +DRSKGFGFVTFAS+
Sbjct: 26 LISCRALSTKLFVGGLSFYTTDKGLQEAFSQYGQVVEAQVVSDRVSDRSKGFGFVTFASQ 85
Query: 171 EEAHRALNDMHGKVLHGRVLAVEFAKMRYQPRVDIPIARGPPD 43
+EAH+A+ +M+GK L+GRV+ V++AK + +PIARGPP+
Sbjct: 86 DEAHKAVEEMNGKALNGRVIFVDYAKPKSDYGGGMPIARGPPN 128
>ref|XP_006339140.1| PREDICTED: glycine-rich RNA-binding protein 3, mitochondrial-like
[Solanum tuberosum]
Length = 129
Score = 139 bits (350), Expect = 4e-31
Identities = 69/107 (64%), Positives = 90/107 (84%), Gaps = 3/107 (2%)
Frame = -2
Query: 348 ISRRGIAFKLFVKGLSFYTSDKGLEEAFSQYGQVVEAKVVSDQATDRSKGFGFVTFASEE 169
+SRRGIA KLFV GLSFYT++K L EAFSQ+GQV+EAK+V+D+ +DRSKGFGFVT+ASE+
Sbjct: 24 LSRRGIASKLFVGGLSFYTTEKALSEAFSQHGQVIEAKIVTDRVSDRSKGFGFVTYASED 83
Query: 168 EAHRALNDMHGKVLHGRVLAVEFAKMRYQPRVD---IPIARGPPDPP 37
EA +AL +M+GK L+GRV+ V++AK P+ D +PIARGPP+PP
Sbjct: 84 EAEKALQEMNGKPLNGRVVFVDYAK----PKTDGGGMPIARGPPEPP 126
>ref|XP_004249429.1| PREDICTED: cold-inducible RNA-binding protein-like isoform 1
[Solanum lycopersicum]
Length = 129
Score = 138 bits (348), Expect = 7e-31
Identities = 69/107 (64%), Positives = 89/107 (83%), Gaps = 3/107 (2%)
Frame = -2
Query: 348 ISRRGIAFKLFVKGLSFYTSDKGLEEAFSQYGQVVEAKVVSDQATDRSKGFGFVTFASEE 169
+SRRGIA KLFV GLSFYT++K L EAFSQ+GQV+EAK+V+D+ +DRSKGFGFVT+ASE+
Sbjct: 24 LSRRGIASKLFVGGLSFYTTEKALSEAFSQHGQVIEAKIVTDRVSDRSKGFGFVTYASED 83
Query: 168 EAHRALNDMHGKVLHGRVLAVEFAKMRYQPRVD---IPIARGPPDPP 37
EA +AL +M+GK L+GRV+ V++AK P+ D PIARGPP+PP
Sbjct: 84 EAEKALQEMNGKPLNGRVVFVDYAK----PKTDGGSTPIARGPPEPP 126
>ref|XP_004149190.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Cucumis sativus]
Length = 134
Score = 138 bits (347), Expect = 1e-30
Identities = 69/103 (66%), Positives = 84/103 (81%)
Frame = -2
Query: 351 LISRRGIAFKLFVKGLSFYTSDKGLEEAFSQYGQVVEAKVVSDQATDRSKGFGFVTFASE 172
L+S RGIA KLFV GLS+YT+DKGL EAFSQYGQV+EA VV D+ +D+SKGFGFVTFAS
Sbjct: 27 LVSYRGIATKLFVGGLSYYTTDKGLSEAFSQYGQVIEATVVMDRVSDKSKGFGFVTFASL 86
Query: 171 EEAHRALNDMHGKVLHGRVLAVEFAKMRYQPRVDIPIARGPPD 43
+EAH AL++M+GK L+GRV+ V +AK R IPIARGPP+
Sbjct: 87 DEAHTALSEMNGKPLNGRVIFVNYAKPTTSSRGAIPIARGPPE 129
>ref|XP_006430132.1| hypothetical protein CICLE_v10012994mg [Citrus clementina]
gi|557532189|gb|ESR43372.1| hypothetical protein
CICLE_v10012994mg [Citrus clementina]
Length = 155
Score = 137 bits (346), Expect = 1e-30
Identities = 68/102 (66%), Positives = 84/102 (82%)
Frame = -2
Query: 348 ISRRGIAFKLFVKGLSFYTSDKGLEEAFSQYGQVVEAKVVSDQATDRSKGFGFVTFASEE 169
IS RGIA KLFV GLSFYTS+KGL +AFSQYGQVVEA +V D+ +D+SKGFGFVTFAS E
Sbjct: 34 ISCRGIASKLFVGGLSFYTSNKGLSDAFSQYGQVVEANIVMDRVSDKSKGFGFVTFASHE 93
Query: 168 EAHRALNDMHGKVLHGRVLAVEFAKMRYQPRVDIPIARGPPD 43
EA +AL++M+GK L GRV+ V++AK + R +PIARGPP+
Sbjct: 94 EAEKALSEMNGKTLDGRVIVVDYAKPKTSFRSGMPIARGPPE 135
>gb|EPS58767.1| hypothetical protein M569_16047 [Genlisea aurea]
Length = 139
Score = 137 bits (345), Expect = 2e-30
Identities = 67/104 (64%), Positives = 88/104 (84%)
Frame = -2
Query: 351 LISRRGIAFKLFVKGLSFYTSDKGLEEAFSQYGQVVEAKVVSDQATDRSKGFGFVTFASE 172
L + RGIA KLF+ GLSFYTS++GL +AFS+YGQV+EA +V+D+ATDRSKGFGFVT+ASE
Sbjct: 35 LFTCRGIASKLFIGGLSFYTSEQGLSDAFSKYGQVIEATIVTDRATDRSKGFGFVTYASE 94
Query: 171 EEAHRALNDMHGKVLHGRVLAVEFAKMRYQPRVDIPIARGPPDP 40
+EA A+ +M+GK L+GRV+ V++AK R R D+PIARGPP+P
Sbjct: 95 DEAENAILEMNGKPLNGRVIFVDYAKPRSSSR-DMPIARGPPEP 137
>ref|XP_002309412.1| predicted protein [Populus trichocarpa]
gi|566255216|ref|XP_006387726.1| RNA-binding family
protein [Populus trichocarpa]
gi|550308259|gb|ERP46640.1| RNA-binding family protein
[Populus trichocarpa]
Length = 139
Score = 137 bits (344), Expect = 2e-30
Identities = 67/103 (65%), Positives = 85/103 (82%)
Frame = -2
Query: 348 ISRRGIAFKLFVKGLSFYTSDKGLEEAFSQYGQVVEAKVVSDQATDRSKGFGFVTFASEE 169
I +RGI KLFV GLS YT++ GL EAFSQYGQVVEAK+V D+A DRSKGFGFVT+ASE+
Sbjct: 32 IWQRGITTKLFVGGLSIYTTENGLSEAFSQYGQVVEAKIVMDRALDRSKGFGFVTYASED 91
Query: 168 EAHRALNDMHGKVLHGRVLAVEFAKMRYQPRVDIPIARGPPDP 40
EA +AL++M+GK L+GRV+ V++AK++ IPIARGPP+P
Sbjct: 92 EAQKALDEMNGKALNGRVIYVDYAKLKTNFGGGIPIARGPPEP 134
>ref|XP_002276063.2| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Vitis vinifera] gi|297740158|emb|CBI30340.3| unnamed
protein product [Vitis vinifera]
Length = 133
Score = 136 bits (342), Expect = 4e-30
Identities = 72/109 (66%), Positives = 85/109 (77%)
Frame = -2
Query: 351 LISRRGIAFKLFVKGLSFYTSDKGLEEAFSQYGQVVEAKVVSDQATDRSKGFGFVTFASE 172
LI RGIA KLFV GLSFYT++KGL E FSQYGQVVEAK+V D+ +DRSKGFGFVTFASE
Sbjct: 26 LICCRGIASKLFVGGLSFYTTEKGLSEHFSQYGQVVEAKIVMDRVSDRSKGFGFVTFASE 85
Query: 171 EEAHRALNDMHGKVLHGRVLAVEFAKMRYQPRVDIPIARGPPDPPKTAD 25
EEA +A +M GK L+GR + V++AK R +PIARGPP+P TAD
Sbjct: 86 EEAQKARTEMDGKELNGRTIFVDYAKPRADFGGGMPIARGPPEP--TAD 132
>ref|XP_006481717.1| PREDICTED: glycine-rich RNA-binding protein 3, mitochondrial-like
isoform X1 [Citrus sinensis]
Length = 155
Score = 135 bits (341), Expect = 5e-30
Identities = 67/102 (65%), Positives = 84/102 (82%)
Frame = -2
Query: 348 ISRRGIAFKLFVKGLSFYTSDKGLEEAFSQYGQVVEAKVVSDQATDRSKGFGFVTFASEE 169
IS RGIA KLFV GLSFYTS+KGL +AFSQYGQVVEA +V D+ +D+SKGFGFVTFAS +
Sbjct: 34 ISCRGIASKLFVGGLSFYTSNKGLSDAFSQYGQVVEANIVVDRVSDKSKGFGFVTFASHD 93
Query: 168 EAHRALNDMHGKVLHGRVLAVEFAKMRYQPRVDIPIARGPPD 43
EA +AL++M+GK L GRV+ V++AK + R +PIARGPP+
Sbjct: 94 EAEKALSEMNGKTLDGRVIIVDYAKPKTSFRSGMPIARGPPE 135
>gb|ESW34930.1| hypothetical protein PHAVU_001G192800g [Phaseolus vulgaris]
Length = 149
Score = 135 bits (340), Expect = 6e-30
Identities = 64/104 (61%), Positives = 82/104 (78%)
Frame = -2
Query: 351 LISRRGIAFKLFVKGLSFYTSDKGLEEAFSQYGQVVEAKVVSDQATDRSKGFGFVTFASE 172
L RRGIA+KLFV GLSFYT++K L +AFS YGQV+EAKVV+D+ +DRSKGFGFVTFAS
Sbjct: 42 LAFRRGIAYKLFVGGLSFYTTEKALSDAFSNYGQVIEAKVVTDRVSDRSKGFGFVTFASP 101
Query: 171 EEAHRALNDMHGKVLHGRVLAVEFAKMRYQPRVDIPIARGPPDP 40
+EA A+ +M GK ++GRV+ V++AK +PIARGPP+P
Sbjct: 102 DEAENAITEMKGKTINGRVIFVDYAKPNINGNAAMPIARGPPEP 145
>ref|XP_004161215.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Cucumis sativus]
Length = 134
Score = 135 bits (340), Expect = 6e-30
Identities = 68/103 (66%), Positives = 83/103 (80%)
Frame = -2
Query: 351 LISRRGIAFKLFVKGLSFYTSDKGLEEAFSQYGQVVEAKVVSDQATDRSKGFGFVTFASE 172
L+S R IA KLFV GLS+YT+DKGL EAFSQYGQV+EA VV D+ +D+SKGFGFVTFAS
Sbjct: 27 LVSFRAIATKLFVGGLSYYTTDKGLSEAFSQYGQVIEATVVMDRVSDKSKGFGFVTFASL 86
Query: 171 EEAHRALNDMHGKVLHGRVLAVEFAKMRYQPRVDIPIARGPPD 43
+EAH AL++M+GK L+GRV+ V +AK R IPIARGPP+
Sbjct: 87 DEAHTALSEMNGKPLNGRVIFVNYAKPTTSSRGAIPIARGPPE 129
>gb|EXB54608.1| Cold-inducible RNA-binding protein [Morus notabilis]
Length = 134
Score = 135 bits (339), Expect = 8e-30
Identities = 67/104 (64%), Positives = 84/104 (80%)
Frame = -2
Query: 351 LISRRGIAFKLFVKGLSFYTSDKGLEEAFSQYGQVVEAKVVSDQATDRSKGFGFVTFASE 172
LISRRGIA KLFV GLSF T++ L EAFSQYGQVVEAK+V ++ +D+SKGFGFVTFAS
Sbjct: 27 LISRRGIASKLFVGGLSFSTNETALTEAFSQYGQVVEAKIVMNKVSDKSKGFGFVTFASV 86
Query: 171 EEAHRALNDMHGKVLHGRVLAVEFAKMRYQPRVDIPIARGPPDP 40
+EAH AL +M+GK L+GRV+ V++AK + +PIARGPP+P
Sbjct: 87 DEAHNALTEMNGKALNGRVIFVDYAKPKTDFSEAVPIARGPPEP 130
>ref|XP_006399088.1| hypothetical protein EUTSA_v10014928mg [Eutrema salsugineum]
gi|557100178|gb|ESQ40541.1| hypothetical protein
EUTSA_v10014928mg [Eutrema salsugineum]
Length = 150
Score = 126 bits (316), Expect = 4e-27
Identities = 62/103 (60%), Positives = 85/103 (82%), Gaps = 2/103 (1%)
Frame = -2
Query: 342 RRGIAFKLFVKGLSFYTSDKGLEEAFSQYGQVVEAKVVSDQATDRSKGFGFVTFASEEEA 163
RRG+A KLFV GLSFYT+++GL EAFSQ GQVVEA++V D+ +DRSKGFGFVTFAS++EA
Sbjct: 29 RRGVASKLFVGGLSFYTTEQGLSEAFSQCGQVVEAQIVMDRVSDRSKGFGFVTFASDDEA 88
Query: 162 HRALNDMHGKVLHGRVLAVEFAKMR--YQPRVDIPIARGPPDP 40
+AL +++G+ L+GRV+ V++AK + + +PIARGPP+P
Sbjct: 89 QKALMELNGQQLNGRVIFVDYAKEKQSFGGLGGLPIARGPPEP 131
>ref|XP_006430131.1| hypothetical protein CICLE_v10012994mg [Citrus clementina]
gi|557532188|gb|ESR43371.1| hypothetical protein
CICLE_v10012994mg [Citrus clementina]
Length = 139
Score = 125 bits (313), Expect = 8e-27
Identities = 59/92 (64%), Positives = 76/92 (82%)
Frame = -2
Query: 318 FVKGLSFYTSDKGLEEAFSQYGQVVEAKVVSDQATDRSKGFGFVTFASEEEAHRALNDMH 139
+V GLSFYTS+KGL +AFSQYGQVVEA +V D+ +D+SKGFGFVTFAS EEA +AL++M+
Sbjct: 28 YVAGLSFYTSNKGLSDAFSQYGQVVEANIVMDRVSDKSKGFGFVTFASHEEAEKALSEMN 87
Query: 138 GKVLHGRVLAVEFAKMRYQPRVDIPIARGPPD 43
GK L GRV+ V++AK + R +PIARGPP+
Sbjct: 88 GKTLDGRVIVVDYAKPKTSFRSGMPIARGPPE 119
>gb|EOY08348.1| RNA binding family protein isoform 1 [Theobroma cacao]
gi|508716452|gb|EOY08349.1| RNA binding family protein
isoform 1 [Theobroma cacao] gi|508716454|gb|EOY08351.1|
RNA binding family protein isoform 1 [Theobroma cacao]
gi|508716458|gb|EOY08355.1| RNA binding family protein
isoform 1 [Theobroma cacao]
Length = 129
Score = 125 bits (313), Expect = 8e-27
Identities = 64/107 (59%), Positives = 84/107 (78%), Gaps = 3/107 (2%)
Frame = -2
Query: 351 LISRRGIAFKLFVKGLSFYTSDKGLEEAFSQYGQVVEAKVVSDQATDRSKGFGFVTFASE 172
LI RRGIA KLFV GLSFYT++KGL +AFSQYGQV+EAK+V+D+ + +SKGFGFVT+A E
Sbjct: 23 LICRRGIASKLFVGGLSFYTTEKGLLDAFSQYGQVMEAKIVTDRVSGKSKGFGFVTYACE 82
Query: 171 EEAHRALNDMHGKVLHGRVLAVEFAKMRYQPRVDI---PIARGPPDP 40
+EA +A+ M + L+GRV+ V++AK P ++ PIARGPPDP
Sbjct: 83 DEAEKAITQMDRRALNGRVIFVDYAK----PTSNLGGSPIARGPPDP 125
>gb|AFK39402.1| unknown [Medicago truncatula]
Length = 140
Score = 124 bits (311), Expect = 1e-26
Identities = 59/103 (57%), Positives = 84/103 (81%)
Frame = -2
Query: 351 LISRRGIAFKLFVKGLSFYTSDKGLEEAFSQYGQVVEAKVVSDQATDRSKGFGFVTFASE 172
L RR IAFKLFV GLSF+T++K L +AFS YGQVVEAKV++D+ +++SKG+GFVTFAS+
Sbjct: 24 LTFRRAIAFKLFVGGLSFHTTEKTLSDAFSNYGQVVEAKVITDRISEKSKGYGFVTFASQ 83
Query: 171 EEAHRALNDMHGKVLHGRVLAVEFAKMRYQPRVDIPIARGPPD 43
+EA +A+ +M+ K L+GRV+ V++AK + + +PIARGPP+
Sbjct: 84 DEAEKAITEMNEKALNGRVVFVDYAKPDTKRSMGMPIARGPPE 126
>ref|XP_006481718.1| PREDICTED: glycine-rich RNA-binding protein 3, mitochondrial-like
isoform X2 [Citrus sinensis]
Length = 139
Score = 123 bits (308), Expect = 3e-26
Identities = 58/92 (63%), Positives = 76/92 (82%)
Frame = -2
Query: 318 FVKGLSFYTSDKGLEEAFSQYGQVVEAKVVSDQATDRSKGFGFVTFASEEEAHRALNDMH 139
+V GLSFYTS+KGL +AFSQYGQVVEA +V D+ +D+SKGFGFVTFAS +EA +AL++M+
Sbjct: 28 YVAGLSFYTSNKGLSDAFSQYGQVVEANIVVDRVSDKSKGFGFVTFASHDEAEKALSEMN 87
Query: 138 GKVLHGRVLAVEFAKMRYQPRVDIPIARGPPD 43
GK L GRV+ V++AK + R +PIARGPP+
Sbjct: 88 GKTLDGRVIIVDYAKPKTSFRSGMPIARGPPE 119