BLASTX nr result

ID: Rheum21_contig00024637 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00024637
         (433 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006350819.1| PREDICTED: UPF0503 protein At3g09070, chloro...    60   2e-07
ref|XP_004241181.1| PREDICTED: uncharacterized protein LOC101261...    59   9e-07
emb|CBI16005.3| unnamed protein product [Vitis vinifera]               59   9e-07
emb|CAN79178.1| hypothetical protein VITISV_016729 [Vitis vinifera]    59   9e-07
ref|XP_004143144.1| PREDICTED: UPF0503 protein At3g09070, chloro...    57   3e-06
ref|XP_004295737.1| PREDICTED: UPF0503 protein At3g09070, chloro...    55   7e-06
ref|XP_003552959.1| PREDICTED: UPF0503 protein At3g09070, chloro...    55   7e-06
ref|XP_002322958.1| hypothetical protein POPTR_0016s11900g [Popu...    55   7e-06
gb|ESW05971.1| hypothetical protein PHAVU_010G008500g [Phaseolus...    55   1e-05
gb|AFW78099.1| hypothetical protein ZEAMMB73_210609 [Zea mays]         55   1e-05

>ref|XP_006350819.1| PREDICTED: UPF0503 protein At3g09070, chloroplastic-like [Solanum
           tuberosum]
          Length = 633

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 25/93 (26%)
 Frame = +1

Query: 229 KLQPRRLTPCHRHPGQPLTSLCAPCLRERLSVLN-------------------------P 333
           + + RRL+ C+RHP +P+T +CA CLRERLS L+                         P
Sbjct: 11  RTRTRRLSACYRHPSEPVTGICAACLRERLSGLDSSADSELSIVPTFSNSFENPDVDNGP 70

Query: 334 SPPPAAAGNICSTSSSAAFPELRRCKTFSADKC 432
            P P   G+    ++S+  P+LRRC++ S  +C
Sbjct: 71  EPGPGFDGSRSKAATSSFSPDLRRCRSVSTARC 103


>ref|XP_004241181.1| PREDICTED: uncharacterized protein LOC101261240 [Solanum
           lycopersicum]
          Length = 633

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 31/93 (33%), Positives = 45/93 (48%), Gaps = 25/93 (26%)
 Frame = +1

Query: 229 KLQPRRLTPCHRHPGQPLTSLCAPCLRERLSVLN-------------------------P 333
           + + RRL+ CHRHP +P+T +CA CLRERLS L+                         P
Sbjct: 11  RTRTRRLSACHRHPSEPVTGICAACLRERLSGLDTSADSELSIVPTFSNSFENPYADNGP 70

Query: 334 SPPPAAAGNICSTSSSAAFPELRRCKTFSADKC 432
            P P    +    + S+  P+LRRC++ S  +C
Sbjct: 71  GPEPGFECSRSKAAISSFSPDLRRCRSVSTVRC 103


>emb|CBI16005.3| unnamed protein product [Vitis vinifera]
          Length = 262

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 32/75 (42%), Positives = 44/75 (58%), Gaps = 11/75 (14%)
 Frame = +1

Query: 241 RRLTPCHRHPGQPLTSLCAPCLRERLSVLNP--------SPPPAAAGNI--CSTSSSAAF 390
           RRL+ CHRHP +P T +CA CLR+RL+  +P        SP    +G +     ++ A+ 
Sbjct: 10  RRLSTCHRHPAEPFTGVCASCLRDRLAGFDPATRLEISVSPRVNDSGGVPLQRVANRASC 69

Query: 391 P-ELRRCKTFSADKC 432
           P E RRCK+ SA KC
Sbjct: 70  PLEFRRCKSLSAGKC 84


>emb|CAN79178.1| hypothetical protein VITISV_016729 [Vitis vinifera]
          Length = 603

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 32/75 (42%), Positives = 44/75 (58%), Gaps = 11/75 (14%)
 Frame = +1

Query: 241 RRLTPCHRHPGQPLTSLCAPCLRERLSVLNP--------SPPPAAAGNI--CSTSSSAAF 390
           RRL+ CHRHP +P T +CA CLR+RL+  +P        SP    +G +     ++ A+ 
Sbjct: 10  RRLSTCHRHPAEPFTGVCASCLRDRLAGFDPATRLEISVSPRVNDSGGVPLQRVANRASC 69

Query: 391 P-ELRRCKTFSADKC 432
           P E RRCK+ SA KC
Sbjct: 70  PLEFRRCKSLSAGKC 84


>ref|XP_004143144.1| PREDICTED: UPF0503 protein At3g09070, chloroplastic-like [Cucumis
           sativus] gi|449496609|ref|XP_004160178.1| PREDICTED:
           UPF0503 protein At3g09070, chloroplastic-like [Cucumis
           sativus]
          Length = 575

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 30/63 (47%), Positives = 40/63 (63%)
 Frame = +1

Query: 244 RLTPCHRHPGQPLTSLCAPCLRERLSVLNPSPPPAAAGNICSTSSSAAFPELRRCKTFSA 423
           RL+ CHRHP +P+T  CA CLRERL+ ++P     +   + +  SSA   ELRR K+ SA
Sbjct: 11  RLSTCHRHPSKPVTGFCASCLRERLAGIDPDTQHESP--VQNNHSSA---ELRRSKSHSA 65

Query: 424 DKC 432
            KC
Sbjct: 66  AKC 68


>ref|XP_004295737.1| PREDICTED: UPF0503 protein At3g09070, chloroplastic-like [Fragaria
           vesca subsp. vesca]
          Length = 518

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 31/65 (47%), Positives = 39/65 (60%), Gaps = 5/65 (7%)
 Frame = +1

Query: 235 QPRRLTPCHRHPGQPLTSLCAPCLRERLSVLNPSPPPA---AAGNICSTSSSA--AFPEL 399
           QP R + CHRHP  P+T  CAPCL ERL+ L+ +   A   AAG +  TS +A     EL
Sbjct: 8   QPHRRSTCHRHPTTPITGFCAPCLSERLAGLDSASSSAADTAAGGVPPTSQTAHSGPSEL 67

Query: 400 RRCKT 414
           RR K+
Sbjct: 68  RRSKS 72


>ref|XP_003552959.1| PREDICTED: UPF0503 protein At3g09070, chloroplastic-like [Glycine
           max]
          Length = 544

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 29/59 (49%), Positives = 34/59 (57%)
 Frame = +1

Query: 244 RLTPCHRHPGQPLTSLCAPCLRERLSVLNPSPPPAAAGNICSTSSSAAFPELRRCKTFS 420
           R T CHRHP  P+T  CA CLRERL+ ++              SSSA  PELRR K+FS
Sbjct: 7   RFTTCHRHPSTPVTGFCASCLRERLAGID--------------SSSAESPELRRTKSFS 51


>ref|XP_002322958.1| hypothetical protein POPTR_0016s11900g [Populus trichocarpa]
           gi|222867588|gb|EEF04719.1| hypothetical protein
           POPTR_0016s11900g [Populus trichocarpa]
          Length = 628

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 34/91 (37%), Positives = 45/91 (49%), Gaps = 26/91 (28%)
 Frame = +1

Query: 235 QPRR-LTPCHRHPGQPLTSLCAPCLRERLSVLNPS------------------------- 336
           QP R  T C RHP +  T  C  CL ERL+VL+P+                         
Sbjct: 12  QPHRPSTSCDRHPEEHFTGFCPSCLCERLAVLDPNTSSAASSSSSRKPTATAALKAIFKP 71

Query: 337 PPPAAAGNICSTSSSAAFPELRRCKTFSADK 429
           P P+++ N  ++S S+ FPELRR K+FSA K
Sbjct: 72  PQPSSSNNNNNSSKSSFFPELRRTKSFSASK 102


>gb|ESW05971.1| hypothetical protein PHAVU_010G008500g [Phaseolus vulgaris]
          Length = 649

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 32/76 (42%), Positives = 40/76 (52%), Gaps = 11/76 (14%)
 Frame = +1

Query: 235 QPRR-LTPCHRHPGQPLTSLCAPCLRERLSVLNPS----------PPPAAAGNICSTSSS 381
           QP R  T C RHP +  T  C  CL ERL++L+P+          PP  AA  + +    
Sbjct: 8   QPHRPSTSCPRHPDEAFTGFCPSCLCERLALLDPNNNNTPATARKPPSTAAAALKALFRP 67

Query: 382 AAFPELRRCKTFSADK 429
            A PELRR K+FSA K
Sbjct: 68  PALPELRRTKSFSASK 83


>gb|AFW78099.1| hypothetical protein ZEAMMB73_210609 [Zea mays]
          Length = 660

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 35/89 (39%), Positives = 42/89 (47%), Gaps = 25/89 (28%)
 Frame = +1

Query: 238 PRRL--TPCHRHPGQPLTSLCAPCLRERLSVLNPS-----------------------PP 342
           PRR   T C  HPG+  T  CA CLRERL+ L  +                       P 
Sbjct: 12  PRRSVSTTCDLHPGETFTGFCAACLRERLAGLESTGGSAAAAAPGRRSTSAIRSLFTRPF 71

Query: 343 PAAAGNICSTSSSAAFPELRRCKTFSADK 429
            AAAG   S S +AA P+LRRCK+FS  +
Sbjct: 72  AAAAGGAPSGSGAAALPDLRRCKSFSCGR 100


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