BLASTX nr result
ID: Rheum21_contig00024504
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00024504
(421 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOY10448.1| Cyclin/Brf1-like TBP-binding protein, putative is... 89 5e-16
ref|XP_002525676.1| transcription initiation factor brf1, putati... 80 2e-13
emb|CBI31214.3| unnamed protein product [Vitis vinifera] 80 4e-13
ref|XP_006479195.1| PREDICTED: transcription factor IIIB 90 kDa ... 79 5e-13
ref|XP_006443522.1| hypothetical protein CICLE_v10019321mg [Citr... 79 5e-13
ref|XP_006443520.1| hypothetical protein CICLE_v10019321mg [Citr... 79 5e-13
ref|XP_006369550.1| hypothetical protein POPTR_0001s25330g [Popu... 76 4e-12
ref|XP_004157302.1| PREDICTED: transcription factor IIIB 60 kDa ... 75 9e-12
ref|XP_004296706.1| PREDICTED: transcription factor IIIB 90 kDa ... 74 3e-11
ref|XP_006348566.1| PREDICTED: transcription factor IIIB 90 kDa ... 71 1e-10
ref|XP_006354652.1| PREDICTED: transcription factor IIIB 90 kDa ... 70 2e-10
ref|XP_004229719.1| PREDICTED: transcription factor IIIB 90 kDa ... 70 3e-10
ref|XP_006826322.1| hypothetical protein AMTR_s00004p00092300 [A... 70 4e-10
ref|XP_004493345.1| PREDICTED: uncharacterized protein LOC101511... 68 1e-09
ref|XP_004489648.1| PREDICTED: transcription factor IIIB 90 kDa ... 68 1e-09
gb|EMJ28902.1| hypothetical protein PRUPE_ppa005778mg [Prunus pe... 65 1e-08
ref|XP_004135795.1| PREDICTED: transcription factor IIIB 60 kDa ... 65 1e-08
ref|XP_004493225.1| PREDICTED: transcription factor IIIB 90 kDa ... 64 2e-08
ref|XP_002882615.1| RNA polymerase II transcription factor [Arab... 63 4e-08
ref|XP_006297259.1| hypothetical protein CARUB_v10013272mg [Caps... 62 8e-08
>gb|EOY10448.1| Cyclin/Brf1-like TBP-binding protein, putative isoform 1 [Theobroma
cacao]
Length = 605
Score = 89.4 bits (220), Expect = 5e-16
Identities = 52/124 (41%), Positives = 79/124 (63%), Gaps = 6/124 (4%)
Frame = +3
Query: 3 KSKKEQRQRRAAELRT---PQTAAEATHQMLTRKKLSSRVNYDVLKEIFDEPQVASNNTK 173
KS+KE++Q+RAAE + PQTAAEAT +ML RK+LSS++NYD L+++FDEP +S K
Sbjct: 483 KSRKERQQKRAAEAKNSGPPQTAAEATRRMLARKRLSSKINYDALEKLFDEPVASSEKPK 542
Query: 174 KMKTDPNPN--ESKMSPIPEDDIETPGK-NDYWGKAGNEEYYEKSNAPDNDYYNEEQVYN 344
K K + + + E K+S I +++ + + ND G G ++ DN+ E +VY+
Sbjct: 543 KQKNESHSDEKEDKVSKIGKEEGDLADEYNDVEGDGGGTKF-------DNNLDFENEVYD 595
Query: 345 NDDD 356
DDD
Sbjct: 596 YDDD 599
>ref|XP_002525676.1| transcription initiation factor brf1, putative [Ricinus communis]
gi|223534976|gb|EEF36659.1| transcription initiation
factor brf1, putative [Ricinus communis]
Length = 625
Score = 80.5 bits (197), Expect = 2e-13
Identities = 52/130 (40%), Positives = 79/130 (60%), Gaps = 13/130 (10%)
Frame = +3
Query: 3 KSKKEQRQRRAAELRTP---QTAAEATHQMLTRKKLSSRVNYDVLKEIFDEPQVASNNTK 173
KSKKE++Q+RAAE + Q+A+EA QMLT+K+LSS++NYDVL+++FDEP S + K
Sbjct: 497 KSKKEKQQKRAAEAKNSVPAQSASEAARQMLTKKRLSSKINYDVLEKLFDEP--GSKDPK 554
Query: 174 KMKTDPNPNESKMSPIPE---DDIETPGKNDYWG-----KAGNEEYYEK-SNAPDNDY-Y 323
K++T+ + + P + DD+ KN+ K N++Y E A D +Y +
Sbjct: 555 KLRTESESDTDEKFPQTDDRNDDLGPGNKNEKEEDAEAYKYNNDQYDENVDEAYDYEYDF 614
Query: 324 NEEQVYNNDD 353
E+ YN DD
Sbjct: 615 QEQDGYNYDD 624
>emb|CBI31214.3| unnamed protein product [Vitis vinifera]
Length = 622
Score = 79.7 bits (195), Expect = 4e-13
Identities = 53/126 (42%), Positives = 75/126 (59%), Gaps = 10/126 (7%)
Frame = +3
Query: 3 KSKKEQRQRRAAELRTP---QTAAEATHQMLTRKKLSSRVNYDVLKEIFDEPQVASNNTK 173
KS+KE++Q+RAAE + QTAAEAT QMLT+K+LSS++NYDVL+++FD+ V S N K
Sbjct: 498 KSRKERQQKRAAEAKNTVPAQTAAEATRQMLTKKRLSSKINYDVLEKLFDD-SVPSENPK 556
Query: 174 KMKTD-PNPNESKMSPI------PEDDIETPGKNDYWGKAGNEEYYEKSNAPDNDYYNEE 332
K++T+ N +PI PE+D P D +G G + ND Y E
Sbjct: 557 KIRTESQTENNDHKAPISNKKLEPEEDDLAP--EDEFGYEG-----DTGGLYGNDLYGEG 609
Query: 333 QVYNND 350
Y++D
Sbjct: 610 YDYDDD 615
>ref|XP_006479195.1| PREDICTED: transcription factor IIIB 90 kDa subunit-like isoform X2
[Citrus sinensis]
Length = 618
Score = 79.3 bits (194), Expect = 5e-13
Identities = 53/127 (41%), Positives = 75/127 (59%), Gaps = 10/127 (7%)
Frame = +3
Query: 3 KSKKEQRQRRAAELRTP---QTAAEATHQMLTRKKLSSRVNYDVLKEIFDEPQVASNNTK 173
KS+KE++Q+RAAE + QTA EAT +MLT+K+LSS++NYDVL+++FD+ V S N K
Sbjct: 493 KSRKEKQQKRAAEAKNSGPAQTALEATRRMLTKKRLSSKINYDVLEKLFDD-SVTSENPK 551
Query: 174 KMKTDPN-------PNESKMSPIPEDDIETPGKNDYWGKAGNEEYYEKSNAPDNDYYNEE 332
K +TD + PN K +D+ G D G G E YE + DY N +
Sbjct: 552 KKRTDSHSDYDDKFPNNGKKEH-ESEDLGPEGDFDANGDVG--EAYEN----ELDYGNVD 604
Query: 333 QVYNNDD 353
+ Y+ DD
Sbjct: 605 EAYDFDD 611
>ref|XP_006443522.1| hypothetical protein CICLE_v10019321mg [Citrus clementina]
gi|568851023|ref|XP_006479194.1| PREDICTED:
transcription factor IIIB 90 kDa subunit-like isoform X1
[Citrus sinensis] gi|557545784|gb|ESR56762.1|
hypothetical protein CICLE_v10019321mg [Citrus
clementina]
Length = 620
Score = 79.3 bits (194), Expect = 5e-13
Identities = 53/127 (41%), Positives = 75/127 (59%), Gaps = 10/127 (7%)
Frame = +3
Query: 3 KSKKEQRQRRAAELRTP---QTAAEATHQMLTRKKLSSRVNYDVLKEIFDEPQVASNNTK 173
KS+KE++Q+RAAE + QTA EAT +MLT+K+LSS++NYDVL+++FD+ V S N K
Sbjct: 495 KSRKEKQQKRAAEAKNSGPAQTALEATRRMLTKKRLSSKINYDVLEKLFDD-SVTSENPK 553
Query: 174 KMKTDPN-------PNESKMSPIPEDDIETPGKNDYWGKAGNEEYYEKSNAPDNDYYNEE 332
K +TD + PN K +D+ G D G G E YE + DY N +
Sbjct: 554 KKRTDSHSDYDDKFPNNGKKEH-ESEDLGPEGDFDANGDVG--EAYEN----ELDYGNVD 606
Query: 333 QVYNNDD 353
+ Y+ DD
Sbjct: 607 EAYDFDD 613
>ref|XP_006443520.1| hypothetical protein CICLE_v10019321mg [Citrus clementina]
gi|567902066|ref|XP_006443521.1| hypothetical protein
CICLE_v10019321mg [Citrus clementina]
gi|557545782|gb|ESR56760.1| hypothetical protein
CICLE_v10019321mg [Citrus clementina]
gi|557545783|gb|ESR56761.1| hypothetical protein
CICLE_v10019321mg [Citrus clementina]
Length = 543
Score = 79.3 bits (194), Expect = 5e-13
Identities = 53/127 (41%), Positives = 75/127 (59%), Gaps = 10/127 (7%)
Frame = +3
Query: 3 KSKKEQRQRRAAELRTP---QTAAEATHQMLTRKKLSSRVNYDVLKEIFDEPQVASNNTK 173
KS+KE++Q+RAAE + QTA EAT +MLT+K+LSS++NYDVL+++FD+ V S N K
Sbjct: 418 KSRKEKQQKRAAEAKNSGPAQTALEATRRMLTKKRLSSKINYDVLEKLFDD-SVTSENPK 476
Query: 174 KMKTDPN-------PNESKMSPIPEDDIETPGKNDYWGKAGNEEYYEKSNAPDNDYYNEE 332
K +TD + PN K +D+ G D G G E YE + DY N +
Sbjct: 477 KKRTDSHSDYDDKFPNNGKKEH-ESEDLGPEGDFDANGDVG--EAYEN----ELDYGNVD 529
Query: 333 QVYNNDD 353
+ Y+ DD
Sbjct: 530 EAYDFDD 536
>ref|XP_006369550.1| hypothetical protein POPTR_0001s25330g [Populus trichocarpa]
gi|550348149|gb|ERP66119.1| hypothetical protein
POPTR_0001s25330g [Populus trichocarpa]
Length = 508
Score = 76.3 bits (186), Expect = 4e-12
Identities = 45/122 (36%), Positives = 71/122 (58%), Gaps = 4/122 (3%)
Frame = +3
Query: 3 KSKKEQRQRRAAELRTP---QTAAEATHQMLTRKKLSSRVNYDVLKEIFDEPQVASNNTK 173
KSKKE +Q+RAAE R ++AAEA H+MLT+K++SS++NYDVL+++F+EP+
Sbjct: 384 KSKKEMQQKRAAEARNSVPAKSAAEAVHRMLTKKRISSKINYDVLEKLFEEPEAKDAKRP 443
Query: 174 KMKTDPNPNESKMSPIPED-DIETPGKNDYWGKAGNEEYYEKSNAPDNDYYNEEQVYNND 350
+ ++ P+P E + +D +E +ND G A D+ Y+E +D
Sbjct: 444 RTESHPDPVEKVLHTDGKDHKLEDTNENDGLGPLDENVDDAVGEAYDDFLYDEN---GSD 500
Query: 351 DD 356
DD
Sbjct: 501 DD 502
>ref|XP_004157302.1| PREDICTED: transcription factor IIIB 60 kDa subunit-like [Cucumis
sativus]
Length = 663
Score = 75.1 bits (183), Expect = 9e-12
Identities = 50/126 (39%), Positives = 73/126 (57%), Gaps = 9/126 (7%)
Frame = +3
Query: 3 KSKKEQRQRRAAELR--TP-QTAAEATHQMLTRKKLSSRVNYDVLKEIFDEPQVASNNTK 173
KS+KE++++RAAE + TP QTAAEAT QML +K+LSS++NYDVL ++FDE + K
Sbjct: 541 KSRKERQRKRAAEAKNATPAQTAAEATRQMLNKKRLSSKINYDVLDKLFDESAGMEPSAK 600
Query: 174 KMKTDPNPNESKMSPIPEDDIETPGKND------YWGKAGNEEYYEKSNAPDNDYYNEEQ 335
K K + E++ + + ET + + Y G G+ YYE + YN EQ
Sbjct: 601 K-KCEEQAEETEKTRNTTKEFETTEEQEEDYDDGYDGTYGSGLYYENM----EETYNHEQ 655
Query: 336 VYNNDD 353
Y D+
Sbjct: 656 DYGYDE 661
>ref|XP_004296706.1| PREDICTED: transcription factor IIIB 90 kDa subunit-like [Fragaria
vesca subsp. vesca]
Length = 620
Score = 73.6 bits (179), Expect = 3e-11
Identities = 52/124 (41%), Positives = 75/124 (60%), Gaps = 7/124 (5%)
Frame = +3
Query: 3 KSKKEQRQRRAAELR--TP-QTAAEATHQMLTRKKLSSRVNYDVLKEIFDEPQVASNNTK 173
K KKE++ RAAE + TP QTAAEA HQMLT+K+LSS++N+DVL+++F E + +K
Sbjct: 494 KRKKERQLARAAEAKNSTPAQTAAEAVHQMLTKKRLSSKINFDVLEDMF-ETSEGPDVSK 552
Query: 174 KMKTDPN-PNESKMSPIPEDDIETPGKNDYWG---KAGNEEYYEKSNAPDNDYYNEEQVY 341
K K D + N++KM E+ K+D G + G+EE E ++DY E Y
Sbjct: 553 KRKIDSHLDNDNKMPHDSEELKYDAYKDDDLGMEQEYGDEEGLEDIGYNNHDYVEEADEY 612
Query: 342 NNDD 353
N+ D
Sbjct: 613 NDRD 616
>ref|XP_006348566.1| PREDICTED: transcription factor IIIB 90 kDa subunit-like [Solanum
tuberosum]
Length = 622
Score = 71.2 bits (173), Expect = 1e-10
Identities = 47/126 (37%), Positives = 72/126 (57%), Gaps = 8/126 (6%)
Frame = +3
Query: 3 KSKKEQRQRRAAELRTP---QTAAEATHQMLTRKKLSSRVNYDVLKEIFDEPQVASNNTK 173
+S+KE+RQ+RAAEL+ +T EAT QMLTRK+L +++NYD+L+++FD+ ++ N K
Sbjct: 507 ESRKEKRQKRAAELKNSGPAKTPFEATKQMLTRKRLCTKINYDLLEKLFDDSEILQNPKK 566
Query: 174 KMKTD--PNPNESKMSPIPEDDI-ETPGKNDYWGKAGNEEYYEKSNAPDNDY--YNEEQV 338
D N NES+ + ED+I E P Y++ D D Y+ +Q
Sbjct: 567 SRNVDDSTNHNESRNFFLEEDEIYEEPFVQ-----------YDEDMRYDEDVGGYDYDQH 615
Query: 339 YNNDDD 356
Y DD+
Sbjct: 616 YGYDDE 621
>ref|XP_006354652.1| PREDICTED: transcription factor IIIB 90 kDa subunit-like [Solanum
tuberosum]
Length = 615
Score = 70.5 bits (171), Expect = 2e-10
Identities = 46/120 (38%), Positives = 69/120 (57%), Gaps = 3/120 (2%)
Frame = +3
Query: 3 KSKKEQRQRRAAELRTP---QTAAEATHQMLTRKKLSSRVNYDVLKEIFDEPQVASNNTK 173
KSKKE++Q+RAAEL+ QTAAEAT QML +K+LS+++NYDVL+++FD+ N K
Sbjct: 503 KSKKEKQQKRAAELKNTGPAQTAAEATKQMLAKKRLSNKINYDVLEKLFDDS--LPENPK 560
Query: 174 KMKTDPNPNESKMSPIPEDDIETPGKNDYWGKAGNEEYYEKSNAPDNDYYNEEQVYNNDD 353
K +T + + + D I+ +Y G + +Y D Y +Q Y+ DD
Sbjct: 561 KARTAYDSTDD--YGVKSDKIDPEVDENYEHTFGEDVHY----GEDVGGYGYDQDYDLDD 614
>ref|XP_004229719.1| PREDICTED: transcription factor IIIB 90 kDa subunit-like [Solanum
lycopersicum]
Length = 615
Score = 70.1 bits (170), Expect = 3e-10
Identities = 46/120 (38%), Positives = 73/120 (60%), Gaps = 3/120 (2%)
Frame = +3
Query: 3 KSKKEQRQRRAAELRTP---QTAAEATHQMLTRKKLSSRVNYDVLKEIFDEPQVASNNTK 173
KSKKE++Q+RAAEL+ QTAAEAT QML +K+LS+++NYDVL+++FD+ A N K
Sbjct: 503 KSKKEKQQKRAAELKNTGPAQTAAEATKQMLAKKRLSNKINYDVLEKLFDDS--APENPK 560
Query: 174 KMKTDPNPNESKMSPIPEDDIETPGKNDYWGKAGNEEYYEKSNAPDNDYYNEEQVYNNDD 353
K +T + + + D I+ P ++ + E+++ + D Y +Q Y+ DD
Sbjct: 561 KARTAYDSTDD--YGVKSDKID-PEVDENYDDTFGEDFH---SGEDVGGYGYDQDYDLDD 614
>ref|XP_006826322.1| hypothetical protein AMTR_s00004p00092300 [Amborella trichopoda]
gi|548830636|gb|ERM93559.1| hypothetical protein
AMTR_s00004p00092300 [Amborella trichopoda]
Length = 737
Score = 69.7 bits (169), Expect = 4e-10
Identities = 47/143 (32%), Positives = 78/143 (54%), Gaps = 19/143 (13%)
Frame = +3
Query: 3 KSKKEQRQRRAAELR--TP-QTAAEATHQMLTRKKLSSRVNYDVLKEIFDEPQVASN--- 164
K KK+++Q+RA E R TP QTAAEAT QMLT+KK+SS++NY+VL ++FDE A +
Sbjct: 559 KMKKDKQQKRAEEARNATPAQTAAEATRQMLTKKKISSKINYEVLNKLFDEETPAKDEGK 618
Query: 165 ----------NTKKMKTDPNPNESKMSPIPEDD---IETPGKNDYWGKAGNEEYYEKSNA 305
++K+ +T + +S+ +++ +T ND + YE+ +A
Sbjct: 619 TQDGDAEEVPSSKRQRTKSSHGDSRAQKTKDENDRGFDTEALND-------DNGYEEQHA 671
Query: 306 PDNDYYNEEQVYNNDDDSSWF*N 374
++ Y Q Y N ++ + N
Sbjct: 672 GEDYGYENAQGYGNAEEGYGYGN 694
>ref|XP_004493345.1| PREDICTED: uncharacterized protein LOC101511742 [Cicer arietinum]
Length = 190
Score = 68.2 bits (165), Expect = 1e-09
Identities = 44/127 (34%), Positives = 72/127 (56%), Gaps = 9/127 (7%)
Frame = +3
Query: 3 KSKKEQRQRRAAELRT---PQTAAEATHQM-LTRKKLSSRVNYDVLKEIFDEPQVASNNT 170
KS+KE +QRRA + + Q+AAEA QM T+++LS ++N+D L ++F++ + N
Sbjct: 67 KSRKEMKQRRAQQAKNSGPAQSAAEAACQMEKTKQRLSKKINFDCLAKLFEDKPEDAGNP 126
Query: 171 KKMKTD-PNPNESKMSPIPEDDIETPGKNDYWGKAGN----EEYYEKSNAPDNDYYNEEQ 335
KK + D P+ N K ED K+D G A N ++ ++ + D+ Y++EE
Sbjct: 127 KKARFDLPSDNHDKFQSKVEDQ-----KDDELGSADNFEDGDQDWDNNENMDDAYFHEED 181
Query: 336 VYNNDDD 356
+N DDD
Sbjct: 182 GHNYDDD 188
>ref|XP_004489648.1| PREDICTED: transcription factor IIIB 90 kDa subunit-like [Cicer
arietinum]
Length = 613
Score = 67.8 bits (164), Expect = 1e-09
Identities = 44/127 (34%), Positives = 71/127 (55%), Gaps = 9/127 (7%)
Frame = +3
Query: 3 KSKKEQRQRRAAELRT---PQTAAEATHQMLTRKKLSSRVNYDVLKEIFDEPQVASNNTK 173
KS+KE +QRRA E ++ Q+AAEAT +MLT K+LSS++N+D L ++F EP N K
Sbjct: 487 KSRKEMKQRRAQEAKSLGPAQSAAEATRRMLTAKRLSSKLNFDRLDKLFAEPAAPENLKK 546
Query: 174 KMKTDPNPNE------SKMSPIPEDDIETPGKNDYWGKAGNEEYYEKSNAPDNDYYNEEQ 335
P+ N+ S+ + ED++ G D + + Y+ ++ P+N Y +
Sbjct: 547 ARVQLPSDNDDNLELKSEAKRMEEDEL---GLVDKFADGDMDGEYDNTSYPENAY----E 599
Query: 336 VYNNDDD 356
Y+ +DD
Sbjct: 600 TYDYEDD 606
>gb|EMJ28902.1| hypothetical protein PRUPE_ppa005778mg [Prunus persica]
Length = 444
Score = 64.7 bits (156), Expect = 1e-08
Identities = 45/125 (36%), Positives = 67/125 (53%), Gaps = 9/125 (7%)
Frame = +3
Query: 3 KSKKEQRQRRAAELRTP---QTAAEATHQMLTRKKLSSRVNYDVLKEIFDEPQVASNNTK 173
K +KE++ RAAE R QTAAEA HQMLT+K+LSS++N+D L+++F + N+ K
Sbjct: 323 KKRKERQLARAAEARNDTEAQTAAEAVHQMLTKKRLSSKINFDALEDMFQTAEAPDNSKK 382
Query: 174 KMKTDPNPNESKMSPIPEDDIETPG-KNDYWGKAGNE-----EYYEKSNAPDNDYYNEEQ 335
K ++ P+ + E+ +E KND GNE + N D Y E+
Sbjct: 383 KKESHPDIDGVMQH---EEGLEFDAYKNDENEDDGNEGTVGYNILDPENV-DEQYDYEDY 438
Query: 336 VYNND 350
Y +D
Sbjct: 439 GYGDD 443
>ref|XP_004135795.1| PREDICTED: transcription factor IIIB 60 kDa subunit-like [Cucumis
sativus]
Length = 643
Score = 64.7 bits (156), Expect = 1e-08
Identities = 38/83 (45%), Positives = 56/83 (67%), Gaps = 3/83 (3%)
Frame = +3
Query: 3 KSKKEQRQRRAAELR--TP-QTAAEATHQMLTRKKLSSRVNYDVLKEIFDEPQVASNNTK 173
KS+KE++++RAAE + TP QTAAEAT QML +K+LSS++NYDVL ++FDE + K
Sbjct: 541 KSRKERQRKRAAEAKNATPAQTAAEATRQMLNKKRLSSKINYDVLDKLFDESAGMEPSAK 600
Query: 174 KMKTDPNPNESKMSPIPEDDIET 242
K K + E++ + + ET
Sbjct: 601 K-KCEEQAEETEKTRNTTKEFET 622
>ref|XP_004493225.1| PREDICTED: transcription factor IIIB 90 kDa subunit-like [Cicer
arietinum]
Length = 619
Score = 64.3 bits (155), Expect = 2e-08
Identities = 44/131 (33%), Positives = 70/131 (53%), Gaps = 10/131 (7%)
Frame = +3
Query: 3 KSKKEQRQRRAAELRTP---QTAAEATHQMLTRKKLSSRVNYDVLKEIFDEPQVASNNTK 173
KS+KE +QRRA + + Q+AAEA QM+ K+LS ++N+D L ++F++ + N K
Sbjct: 489 KSRKEMKQRRAQQTKNSGPAQSAAEAACQMMKAKRLSKKINFDCLAKLFEDEPANAGNPK 548
Query: 174 KMKTD-PNPNESKMSPIPEDDIETPGKNDYWGKAGNEEYYEKSNAP--DNDYYNEEQV-- 338
K++ D P+ N K ED K+D A N E ++ N D D+ N E +
Sbjct: 549 KVRFDLPSDNHDKFQSKVEDQ-----KDDELRSADNFEDGDQDNFEDGDQDWDNNENMDG 603
Query: 339 --YNNDDDSSW 365
+ +DD S+
Sbjct: 604 AYFPEEDDHSY 614
>ref|XP_002882615.1| RNA polymerase II transcription factor [Arabidopsis lyrata subsp.
lyrata] gi|297328455|gb|EFH58874.1| RNA polymerase II
transcription factor [Arabidopsis lyrata subsp. lyrata]
Length = 600
Score = 63.2 bits (152), Expect = 4e-08
Identities = 40/120 (33%), Positives = 66/120 (55%), Gaps = 3/120 (2%)
Frame = +3
Query: 3 KSKKEQRQRRAAELRT---PQTAAEATHQMLTRKKLSSRVNYDVLKEIFDEPQVASNNTK 173
KS+KE++Q++A E + P TA EA + L +K+LS +NYDVL+E+FD A + K
Sbjct: 473 KSRKEKQQKKAEEAKNAAPPATAMEAVRRTLEKKRLSLVINYDVLEELFD-TSTAEKSPK 531
Query: 174 KMKTDPNPNESKMSPIPEDDIETPGKNDYWGKAGNEEYYEKSNAPDNDYYNEEQVYNNDD 353
+ KT+ + + K E + G+N+ + EE +S + D+ N E+ Y D+
Sbjct: 532 RSKTETDIEKKKEVKSNEHE---KGENEDEAEEDEEEGSVESYDMNTDFQNGEKFYEEDE 588
>ref|XP_006297259.1| hypothetical protein CARUB_v10013272mg [Capsella rubella]
gi|482565968|gb|EOA30157.1| hypothetical protein
CARUB_v10013272mg [Capsella rubella]
Length = 600
Score = 62.0 bits (149), Expect = 8e-08
Identities = 41/122 (33%), Positives = 68/122 (55%), Gaps = 4/122 (3%)
Frame = +3
Query: 3 KSKKEQRQRRAAELRT---PQTAAEATHQMLTRKKLSSRVNYDVLKEIFDEPQVASNNTK 173
+S+KE++Q++A E + P TA EA + L +K+L++ +NYDVL+E+FD N K
Sbjct: 473 QSRKEKQQKKAEEEKNAAPPATAMEAVRRTLVKKRLTTVINYDVLEELFD-TSAGENLPK 531
Query: 174 KMKTDPN-PNESKMSPIPEDDIETPGKNDYWGKAGNEEYYEKSNAPDNDYYNEEQVYNND 350
K KT+ E K E +I G+N+ + G E Y E + N + N E++Y +
Sbjct: 532 KSKTEAGMEKEKKEEKSNEPEI---GENEDEAEEGEEGYVESYDMNTN-FQNGEKLYEEE 587
Query: 351 DD 356
++
Sbjct: 588 EE 589