BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00024437
         (325 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006351139.1| PREDICTED: replication factor C subunit 2-li...   144   2e-32
gb|EXB60119.1| Replication factor C subunit 4 [Morus notabilis]       142   4e-32
ref|XP_004250308.1| PREDICTED: replication factor C subunit 4-li...   142   6e-32
ref|XP_003634411.1| PREDICTED: replication factor C subunit 4 [V...   140   2e-31
ref|XP_002285875.1| PREDICTED: replication factor C subunit 4 is...   140   2e-31
ref|XP_002285874.1| PREDICTED: replication factor C subunit 4 is...   140   2e-31
emb|CAN83520.1| hypothetical protein VITISV_019805 [Vitis vinifera]   140   2e-31
ref|XP_006472822.1| PREDICTED: replication factor C subunit 4-li...   139   5e-31
ref|XP_002468414.1| hypothetical protein SORBIDRAFT_01g045530 [S...   138   7e-31
ref|XP_006434256.1| hypothetical protein CICLE_v10001485mg [Citr...   137   1e-30
ref|XP_002520330.1| replication factor C / DNA polymerase III ga...   137   1e-30
gb|EOY16376.1| ATPase family associated with various cellular ac...   136   3e-30
ref|XP_004290901.1| PREDICTED: replication factor C subunit 4-li...   136   3e-30
ref|XP_002441912.1| hypothetical protein SORBIDRAFT_08g004780 [S...   136   3e-30
ref|XP_004977230.1| PREDICTED: replication factor C subunit 4-li...   136   3e-30
ref|NP_001148581.1| replication factor C subunit 2 [Zea mays] gi...   135   7e-30
ref|XP_006664392.1| PREDICTED: replication factor C subunit 2-li...   134   2e-29
ref|NP_001066296.2| Os12g0176500 [Oryza sativa Japonica Group] g...   134   2e-29
gb|ACF84478.1| unknown [Zea mays] gi|194706416|gb|ACF87292.1| un...   134   2e-29
gb|ESW35924.1| hypothetical protein PHAVU_L0048000g, partial [Ph...   132   4e-29

>ref|XP_006351139.1| PREDICTED: replication factor C subunit 2-like [Solanum tuberosum]
          Length = 339

 Score =  144 bits (362), Expect = 2e-32
 Identities = 70/96 (72%), Positives = 82/96 (85%)
 Frame = +2

Query: 38  VIPQEVVQSLFAACKSGKFDSANKDVDNVIAEGYPVSLMLSQLFDVIVVASDISDEQKAW 217
           VIP EVVQ++F+AC+SG FD ANK+V+NVIAEGYPVS MLSQL+D++V A DISDEQKA 
Sbjct: 238 VIPNEVVQAMFSACRSGNFDLANKEVNNVIAEGYPVSQMLSQLYDIVVDADDISDEQKAR 297

Query: 218 ICKKFGVTDKCLVDGADEYLQLLDAVSDIIRAFSNM 325
           ICKKF   DKCLVDGADEYLQLL+ VS  ++A SNM
Sbjct: 298 ICKKFAEADKCLVDGADEYLQLLNVVSSTMQALSNM 333


>gb|EXB60119.1| Replication factor C subunit 4 [Morus notabilis]
          Length = 309

 Score =  142 bits (359), Expect = 4e-32
 Identities = 71/96 (73%), Positives = 79/96 (82%)
 Frame = +2

Query: 38  VIPQEVVQSLFAACKSGKFDSANKDVDNVIAEGYPVSLMLSQLFDVIVVASDISDEQKAW 217
           VIPQE V++LFAACKSG FD ANK+V+NVIAEGYPVS M SQLFDVIV A D+SDEQKA 
Sbjct: 208 VIPQEFVEALFAACKSGNFDLANKEVNNVIAEGYPVSQMFSQLFDVIVEADDLSDEQKAR 267

Query: 218 ICKKFGVTDKCLVDGADEYLQLLDAVSDIIRAFSNM 325
           IC+K G  DKCLVDGADEYLQLLD   + +RA  NM
Sbjct: 268 ICRKLGEADKCLVDGADEYLQLLDVSGNTMRALCNM 303


>ref|XP_004250308.1| PREDICTED: replication factor C subunit 4-like [Solanum
           lycopersicum]
          Length = 339

 Score =  142 bits (357), Expect = 6e-32
 Identities = 69/96 (71%), Positives = 81/96 (84%)
 Frame = +2

Query: 38  VIPQEVVQSLFAACKSGKFDSANKDVDNVIAEGYPVSLMLSQLFDVIVVASDISDEQKAW 217
           VIP EVVQ++F+AC+SG FD ANK+V+NVIAEGYPVS MLSQL+D++V A DISDEQKA 
Sbjct: 238 VIPNEVVQAIFSACRSGNFDLANKEVNNVIAEGYPVSQMLSQLYDILVDADDISDEQKAR 297

Query: 218 ICKKFGVTDKCLVDGADEYLQLLDAVSDIIRAFSNM 325
           ICKKF   DKCLVDGADEYLQLL+  S  ++A SNM
Sbjct: 298 ICKKFAEADKCLVDGADEYLQLLNVASSTMQALSNM 333


>ref|XP_003634411.1| PREDICTED: replication factor C subunit 4 [Vitis vinifera]
          Length = 334

 Score =  140 bits (353), Expect = 2e-31
 Identities = 72/96 (75%), Positives = 80/96 (83%)
 Frame = +2

Query: 38  VIPQEVVQSLFAACKSGKFDSANKDVDNVIAEGYPVSLMLSQLFDVIVVASDISDEQKAW 217
           V+PQ VVQ+LFAACKSG FDSANK+V+NVIAEGYPVS ML QLFDV+V A DISDEQKA 
Sbjct: 232 VVPQHVVQALFAACKSGDFDSANKEVNNVIAEGYPVSQMLYQLFDVVVEA-DISDEQKAR 290

Query: 218 ICKKFGVTDKCLVDGADEYLQLLDAVSDIIRAFSNM 325
           ICK+    DKCLVDGADEYLQLLD  S+ +RA  NM
Sbjct: 291 ICKRLAEADKCLVDGADEYLQLLDVASNAMRALCNM 326


>ref|XP_002285875.1| PREDICTED: replication factor C subunit 4 isoform 2 [Vitis
           vinifera]
          Length = 329

 Score =  140 bits (353), Expect = 2e-31
 Identities = 72/96 (75%), Positives = 80/96 (83%)
 Frame = +2

Query: 38  VIPQEVVQSLFAACKSGKFDSANKDVDNVIAEGYPVSLMLSQLFDVIVVASDISDEQKAW 217
           V+PQ VVQ+LFAACKSG FDSANK+V+NVIAEGYPVS ML QLFDV+V A DISDEQKA 
Sbjct: 227 VVPQHVVQALFAACKSGDFDSANKEVNNVIAEGYPVSQMLYQLFDVVVEA-DISDEQKAR 285

Query: 218 ICKKFGVTDKCLVDGADEYLQLLDAVSDIIRAFSNM 325
           ICK+    DKCLVDGADEYLQLLD  S+ +RA  NM
Sbjct: 286 ICKRLAEADKCLVDGADEYLQLLDVASNAMRALCNM 321


>ref|XP_002285874.1| PREDICTED: replication factor C subunit 4 isoform 1 [Vitis
           vinifera] gi|302141781|emb|CBI18984.3| unnamed protein
           product [Vitis vinifera]
          Length = 341

 Score =  140 bits (353), Expect = 2e-31
 Identities = 72/96 (75%), Positives = 80/96 (83%)
 Frame = +2

Query: 38  VIPQEVVQSLFAACKSGKFDSANKDVDNVIAEGYPVSLMLSQLFDVIVVASDISDEQKAW 217
           V+PQ VVQ+LFAACKSG FDSANK+V+NVIAEGYPVS ML QLFDV+V A DISDEQKA 
Sbjct: 239 VVPQHVVQALFAACKSGDFDSANKEVNNVIAEGYPVSQMLYQLFDVVVEA-DISDEQKAR 297

Query: 218 ICKKFGVTDKCLVDGADEYLQLLDAVSDIIRAFSNM 325
           ICK+    DKCLVDGADEYLQLLD  S+ +RA  NM
Sbjct: 298 ICKRLAEADKCLVDGADEYLQLLDVASNAMRALCNM 333


>emb|CAN83520.1| hypothetical protein VITISV_019805 [Vitis vinifera]
          Length = 341

 Score =  140 bits (353), Expect = 2e-31
 Identities = 72/96 (75%), Positives = 80/96 (83%)
 Frame = +2

Query: 38  VIPQEVVQSLFAACKSGKFDSANKDVDNVIAEGYPVSLMLSQLFDVIVVASDISDEQKAW 217
           V+PQ VVQ+LFAACKSG FDSANK+V+NVIAEGYPVS ML QLFDV+V A DISDEQKA 
Sbjct: 239 VVPQHVVQALFAACKSGDFDSANKEVNNVIAEGYPVSQMLYQLFDVVVEA-DISDEQKAR 297

Query: 218 ICKKFGVTDKCLVDGADEYLQLLDAVSDIIRAFSNM 325
           ICK+    DKCLVDGADEYLQLLD  S+ +RA  NM
Sbjct: 298 ICKRLAEADKCLVDGADEYLQLLDVASNAMRALCNM 333


>ref|XP_006472822.1| PREDICTED: replication factor C subunit 4-like isoform X1 [Citrus
           sinensis]
          Length = 342

 Score =  139 bits (349), Expect = 5e-31
 Identities = 68/96 (70%), Positives = 77/96 (80%)
 Frame = +2

Query: 38  VIPQEVVQSLFAACKSGKFDSANKDVDNVIAEGYPVSLMLSQLFDVIVVASDISDEQKAW 217
           VIP EVV+ LFA C+SG FD ANK+V+N+IAEGYP SL+LSQLFDV+V   DISDEQKA 
Sbjct: 239 VIPPEVVEGLFAVCRSGDFDLANKEVNNIIAEGYPASLLLSQLFDVVVETEDISDEQKAR 298

Query: 218 ICKKFGVTDKCLVDGADEYLQLLDAVSDIIRAFSNM 325
           ICK     DKCLVDGADEYLQLLD  S++IRA  NM
Sbjct: 299 ICKCLAEVDKCLVDGADEYLQLLDVASNVIRAVCNM 334


>ref|XP_002468414.1| hypothetical protein SORBIDRAFT_01g045530 [Sorghum bicolor]
           gi|241922268|gb|EER95412.1| hypothetical protein
           SORBIDRAFT_01g045530 [Sorghum bicolor]
          Length = 339

 Score =  138 bits (348), Expect = 7e-31
 Identities = 67/96 (69%), Positives = 79/96 (82%)
 Frame = +2

Query: 38  VIPQEVVQSLFAACKSGKFDSANKDVDNVIAEGYPVSLMLSQLFDVIVVASDISDEQKAW 217
           VIP++VV+SL AACKSG+FD ANK+V N+IA+GYPVS +++Q  DVIV A DI D+QKA 
Sbjct: 238 VIPEDVVKSLLAACKSGEFDVANKEVSNIIADGYPVSQLMAQFLDVIVSADDIQDDQKAR 297

Query: 218 ICKKFGVTDKCLVDGADEYLQLLDAVSDIIRAFSNM 325
           ICKK G TDKCLVDGADEYLQLLD  S+ IRA  NM
Sbjct: 298 ICKKLGETDKCLVDGADEYLQLLDVASETIRALFNM 333


>ref|XP_006434256.1| hypothetical protein CICLE_v10001485mg [Citrus clementina]
           gi|557536378|gb|ESR47496.1| hypothetical protein
           CICLE_v10001485mg [Citrus clementina]
          Length = 382

 Score =  137 bits (345), Expect = 1e-30
 Identities = 67/96 (69%), Positives = 77/96 (80%)
 Frame = +2

Query: 38  VIPQEVVQSLFAACKSGKFDSANKDVDNVIAEGYPVSLMLSQLFDVIVVASDISDEQKAW 217
           VIP EVV+ LFA C+SG FD ANK+V+N+IAEGYP SL+LSQLFDV+V   DISDEQ+A 
Sbjct: 279 VIPPEVVEGLFAVCRSGDFDLANKEVNNIIAEGYPASLLLSQLFDVVVETEDISDEQQAR 338

Query: 218 ICKKFGVTDKCLVDGADEYLQLLDAVSDIIRAFSNM 325
           ICK     DKCLVDGADEYLQLLD  S++IRA  NM
Sbjct: 339 ICKCLAKVDKCLVDGADEYLQLLDVASNVIRAVCNM 374


>ref|XP_002520330.1| replication factor C / DNA polymerase III gamma-tau subunit,
           putative [Ricinus communis] gi|223540549|gb|EEF42116.1|
           replication factor C / DNA polymerase III gamma-tau
           subunit, putative [Ricinus communis]
          Length = 342

 Score =  137 bits (345), Expect = 1e-30
 Identities = 67/96 (69%), Positives = 77/96 (80%)
 Frame = +2

Query: 38  VIPQEVVQSLFAACKSGKFDSANKDVDNVIAEGYPVSLMLSQLFDVIVVASDISDEQKAW 217
           VIPQE V +L+AAC+SG FD ANK+V+N+IAEGYPVS ML QL +V+V A DISDEQKA 
Sbjct: 239 VIPQEAVGALYAACRSGDFDMANKEVNNIIAEGYPVSQMLVQLLEVVVEADDISDEQKAQ 298

Query: 218 ICKKFGVTDKCLVDGADEYLQLLDAVSDIIRAFSNM 325
           ICK  G  DKCLVDGADEYLQLLD  S+ +RA  NM
Sbjct: 299 ICKSLGAADKCLVDGADEYLQLLDVASNTMRALCNM 334


>gb|EOY16376.1| ATPase family associated with various cellular activities (AAA)
           [Theobroma cacao]
          Length = 345

 Score =  136 bits (343), Expect = 3e-30
 Identities = 69/96 (71%), Positives = 78/96 (81%)
 Frame = +2

Query: 38  VIPQEVVQSLFAACKSGKFDSANKDVDNVIAEGYPVSLMLSQLFDVIVVASDISDEQKAW 217
           VIPQEVV++L+AACKSG FD ANK+V+NVIAEG+PVS MLSQLFDV+V A DI DEQKA 
Sbjct: 242 VIPQEVVEALYAACKSGNFDLANKEVNNVIAEGFPVSQMLSQLFDVVVEADDIPDEQKAR 301

Query: 218 ICKKFGVTDKCLVDGADEYLQLLDAVSDIIRAFSNM 325
           ICK     DK LVDGADEYLQLLD  S+ +RA  NM
Sbjct: 302 ICKSLAEADKRLVDGADEYLQLLDVASNTMRALCNM 337


>ref|XP_004290901.1| PREDICTED: replication factor C subunit 4-like [Fragaria vesca
           subsp. vesca]
          Length = 339

 Score =  136 bits (343), Expect = 3e-30
 Identities = 69/96 (71%), Positives = 76/96 (79%)
 Frame = +2

Query: 38  VIPQEVVQSLFAACKSGKFDSANKDVDNVIAEGYPVSLMLSQLFDVIVVASDISDEQKAW 217
           VIPQEVV S FAAC+SG FD ANK+V+NVIAEGYPVS M SQLFD++V A DISDEQ A 
Sbjct: 239 VIPQEVVDSFFAACRSGNFDLANKEVNNVIAEGYPVSQMFSQLFDIVVEADDISDEQIAR 298

Query: 218 ICKKFGVTDKCLVDGADEYLQLLDAVSDIIRAFSNM 325
           ICKK G  DK LVDG+DEYLQLLD  S  +RA  NM
Sbjct: 299 ICKKLGEADKRLVDGSDEYLQLLDVASSTMRAICNM 334


>ref|XP_002441912.1| hypothetical protein SORBIDRAFT_08g004780 [Sorghum bicolor]
           gi|241942605|gb|EES15750.1| hypothetical protein
           SORBIDRAFT_08g004780 [Sorghum bicolor]
          Length = 339

 Score =  136 bits (343), Expect = 3e-30
 Identities = 66/96 (68%), Positives = 79/96 (82%)
 Frame = +2

Query: 38  VIPQEVVQSLFAACKSGKFDSANKDVDNVIAEGYPVSLMLSQLFDVIVVASDISDEQKAW 217
           VIP++VV+SL AAC+SG+FD ANK+V N+IA+GYPVS +++Q  DVIV A DI D+QKA 
Sbjct: 238 VIPEDVVKSLLAACRSGEFDVANKEVSNIIADGYPVSQLMAQFLDVIVGADDIPDDQKAR 297

Query: 218 ICKKFGVTDKCLVDGADEYLQLLDAVSDIIRAFSNM 325
           ICKK G TDKCLVDGADEYLQLLD  S+ IRA  NM
Sbjct: 298 ICKKLGETDKCLVDGADEYLQLLDVASETIRALFNM 333


>ref|XP_004977230.1| PREDICTED: replication factor C subunit 4-like [Setaria italica]
          Length = 339

 Score =  136 bits (342), Expect = 3e-30
 Identities = 66/96 (68%), Positives = 79/96 (82%)
 Frame = +2

Query: 38  VIPQEVVQSLFAACKSGKFDSANKDVDNVIAEGYPVSLMLSQLFDVIVVASDISDEQKAW 217
           VIP++VV+SL AAC+SG+FD ANK+V N+IA+GYPVS +++Q  DVIV A DI DEQKA 
Sbjct: 238 VIPEDVVKSLLAACRSGEFDVANKEVSNIIADGYPVSQLMAQFLDVIVSADDIPDEQKAR 297

Query: 218 ICKKFGVTDKCLVDGADEYLQLLDAVSDIIRAFSNM 325
           ICKK G TDKCLVDGADEYLQLLD  S+ IRA  +M
Sbjct: 298 ICKKLGETDKCLVDGADEYLQLLDVASETIRALFDM 333


>ref|NP_001148581.1| replication factor C subunit 2 [Zea mays]
           gi|195620566|gb|ACG32113.1| replication factor C subunit
           2 [Zea mays]
          Length = 339

 Score =  135 bits (339), Expect = 7e-30
 Identities = 65/96 (67%), Positives = 79/96 (82%)
 Frame = +2

Query: 38  VIPQEVVQSLFAACKSGKFDSANKDVDNVIAEGYPVSLMLSQLFDVIVVASDISDEQKAW 217
           VIP++VV+SL AAC+SG+FD ANK+V ++IA+GYPVS +++Q  DVIV A DI D+QKA 
Sbjct: 238 VIPEDVVKSLLAACRSGEFDVANKEVSSIIADGYPVSQLMAQFLDVIVSADDIPDDQKAR 297

Query: 218 ICKKFGVTDKCLVDGADEYLQLLDAVSDIIRAFSNM 325
           ICKK G TDKCLVDGADEYLQLLD  S+ IRA  NM
Sbjct: 298 ICKKLGETDKCLVDGADEYLQLLDVASETIRALFNM 333


>ref|XP_006664392.1| PREDICTED: replication factor C subunit 2-like [Oryza brachyantha]
          Length = 339

 Score =  134 bits (336), Expect = 2e-29
 Identities = 65/95 (68%), Positives = 78/95 (82%)
 Frame = +2

Query: 41  IPQEVVQSLFAACKSGKFDSANKDVDNVIAEGYPVSLMLSQLFDVIVVASDISDEQKAWI 220
           IP++VV+SL A+CKSG+FD ANK+V+N+IA+GYPVS ++SQ  DVIV A DI DEQKA I
Sbjct: 239 IPEDVVKSLLASCKSGEFDVANKEVNNIIADGYPVSQLISQFLDVIVHADDIPDEQKARI 298

Query: 221 CKKFGVTDKCLVDGADEYLQLLDAVSDIIRAFSNM 325
           CKK G  DKCLVDGADEYLQLLD  S+ IRA  +M
Sbjct: 299 CKKLGEADKCLVDGADEYLQLLDVASETIRALFDM 333


>ref|NP_001066296.2| Os12g0176500 [Oryza sativa Japonica Group]
           gi|75173107|sp|Q9FXM3.1|RFC2_ORYSJ RecName:
           Full=Replication factor C subunit 2; Short=OsRFC2;
           AltName: Full=Activator 1 subunit 2
           gi|10798806|dbj|BAB16441.1| replication factor C 37 kDa
           subunit [Oryza sativa Japonica Group]
           gi|77553810|gb|ABA96606.1| Activator 1 37 kDa subunit,
           putative, expressed [Oryza sativa Japonica Group]
           gi|125535960|gb|EAY82448.1| hypothetical protein
           OsI_37665 [Oryza sativa Indica Group]
           gi|125578677|gb|EAZ19823.1| hypothetical protein
           OsJ_35406 [Oryza sativa Japonica Group]
           gi|215737297|dbj|BAG96226.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|255670097|dbj|BAF29315.2| Os12g0176500 [Oryza sativa
           Japonica Group]
          Length = 339

 Score =  134 bits (336), Expect = 2e-29
 Identities = 65/95 (68%), Positives = 78/95 (82%)
 Frame = +2

Query: 41  IPQEVVQSLFAACKSGKFDSANKDVDNVIAEGYPVSLMLSQLFDVIVVASDISDEQKAWI 220
           IP++VV+SL A+CKSG+FD ANK+V+N+IA+GYPVS ++SQ  DVIV A DI DEQKA I
Sbjct: 239 IPEDVVKSLLASCKSGEFDVANKEVNNIIADGYPVSQLISQFLDVIVNADDIPDEQKARI 298

Query: 221 CKKFGVTDKCLVDGADEYLQLLDAVSDIIRAFSNM 325
           CKK G  DKCLVDGADEYLQLLD  S+ IRA  +M
Sbjct: 299 CKKLGEADKCLVDGADEYLQLLDVASETIRALFDM 333


>gb|ACF84478.1| unknown [Zea mays] gi|194706416|gb|ACF87292.1| unknown [Zea mays]
           gi|413916289|gb|AFW56221.1| replication factor C subunit
           2 [Zea mays]
          Length = 339

 Score =  134 bits (336), Expect = 2e-29
 Identities = 64/96 (66%), Positives = 79/96 (82%)
 Frame = +2

Query: 38  VIPQEVVQSLFAACKSGKFDSANKDVDNVIAEGYPVSLMLSQLFDVIVVASDISDEQKAW 217
           VIP++VV+SL AAC+SG+FD ANK+V ++IA+GYPVS +++Q  DVIV A DI D+QKA 
Sbjct: 238 VIPEDVVKSLLAACRSGEFDVANKEVSSIIADGYPVSQLMAQFLDVIVSADDIPDDQKAR 297

Query: 218 ICKKFGVTDKCLVDGADEYLQLLDAVSDIIRAFSNM 325
           ICKK G TDKCLVDGADEYLQLLD  S+ IR+  NM
Sbjct: 298 ICKKLGETDKCLVDGADEYLQLLDVASETIRSLFNM 333


>gb|ESW35924.1| hypothetical protein PHAVU_L0048000g, partial [Phaseolus vulgaris]
          Length = 104

 Score =  132 bits (333), Expect = 4e-29
 Identities = 65/96 (67%), Positives = 79/96 (82%)
 Frame = +2

Query: 38  VIPQEVVQSLFAACKSGKFDSANKDVDNVIAEGYPVSLMLSQLFDVIVVASDISDEQKAW 217
           V+P++VVQ++  AC+SG FD ANK+V+N IAEGYP S ML+QLF+ IV  +DISDEQKA 
Sbjct: 1   VVPEKVVQAVLQACRSGNFDLANKEVNNFIAEGYPASQMLTQLFEAIVEDNDISDEQKAR 60

Query: 218 ICKKFGVTDKCLVDGADEYLQLLDAVSDIIRAFSNM 325
           I KK G  DKCLVDGADEYLQLLD VS+ ++AFSNM
Sbjct: 61  ISKKLGEADKCLVDGADEYLQLLDVVSNTMQAFSNM 96