BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00024274
         (477 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOX92176.1| DNA polymerase III polC-type isoform 2 [Theobroma...    55   1e-05

>gb|EOX92176.1| DNA polymerase III polC-type isoform 2 [Theobroma cacao]
          Length = 277

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 35/130 (26%), Positives = 65/130 (50%)
 Frame = +3

Query: 9   YSVLMKPSESIVHEKKLPSKIKKEEWDTASTLEDEEFQEKLKKHLNDKFWIGWNISRIDV 188
           YS L++P +  V   +            A+  E E+  +K+   LN + W G NI R D 
Sbjct: 52  YSTLIRPKDLSVVPVRSGRCDGITREAVANAPEFEQVADKIFSILNGRVWAGHNIQRFDC 111

Query: 189 QNIQKIFTKIEPPKPVGVFNVLNWARAINIKDTRNLPDLRLATVGHYLEIERKQKNRAED 368
             I+++F +I  P PV V  +++    +  K  R   ++++AT+  Y  + +++ +R+ D
Sbjct: 112 VRIKEVFAEIGRPAPVSV-GIIDSLGVLTEKFGRRAGNMKMATLASYFGLGQQKHSRSLD 170

Query: 369 DALLCVEVFR 398
           D  L +EV +
Sbjct: 171 DVRLNLEVLK 180