BLASTX nr result

ID: Rheum21_contig00024260 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00024260
         (569 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004231154.1| PREDICTED: uncharacterized protein LOC101251...    41   7e-07
emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera]    58   2e-06
emb|CAN78026.1| hypothetical protein VITISV_032464 [Vitis vinifera]    56   7e-06

>ref|XP_004231154.1| PREDICTED: uncharacterized protein LOC101251936 [Solanum
           lycopersicum]
          Length = 906

 Score = 40.8 bits (94), Expect(2) = 7e-07
 Identities = 31/112 (27%), Positives = 47/112 (41%), Gaps = 35/112 (31%)
 Frame = +3

Query: 333 GPSVKSQLVLGKHESGLYLL--HC-QPSTTTNLSMYSSC-------FSQTPSCNSSSLTD 482
           GPS+KS L LGK  +GLYL    C  PS   + + +  C       + +TPS  S+  + 
Sbjct: 437 GPSLKSPLALGKARNGLYLFCSKCHNPSVNDDTASHQKCQSVSLLNYCKTPSPPSTRHSH 496

Query: 483 VV-------------------------LWHKCLGHLPYNKLHQLFVIPTGFA 563
           ++                         LWH  L H+P+ K+  +  IP  F+
Sbjct: 497 IINKKACSTDQISNSAAHFSFNQDNEFLWHARLRHVPFVKMKNISTIPLKFS 548



 Score = 38.1 bits (87), Expect(2) = 7e-07
 Identities = 28/100 (28%), Positives = 38/100 (38%), Gaps = 12/100 (12%)
 Frame = +2

Query: 80  RPPLVCTHSKKTGHSVDNCYKIIRYPRS--GNESREKAIAAQTSGSADDNTASFSGF--- 244
           R  + C + K+T H  D CYK+  YP +      R K  AA    S  D       F   
Sbjct: 303 RSNMFCEYCKRTRHVKDRCYKLHGYPTNTRNPRGRGKGSAANVHTSEGDGNKCEENFEQG 362

Query: 245 -------TTEEYAQLRKLLGKQSVENLGEFAGSAFTGPFS 343
                  +  +Y QL  LLG     N  E+  +  +G  S
Sbjct: 363 KQMPVNLSKSQYEQLLNLLGNLHGGNESEYTNNVSSGAAS 402


>emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera]
          Length = 1450

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 36/118 (30%), Positives = 48/118 (40%), Gaps = 20/118 (16%)
 Frame = +2

Query: 8   CTYCKKNGHSVDFCWQKNGTVSTKRPPLVCTHSKKTGHSVDNCYKIIRYPR--------S 163
           C++CKK GH    CW            + C H  K GH  +NCY+I+ YP          
Sbjct: 266 CSHCKKTGHETSTCWSL----------VACPHCHKHGHDKNNCYEIVGYPEGWLDQNKAD 315

Query: 164 GNESREKAIAAQTSGSADDNTASFS------------GFTTEEYAQLRKLLGKQSVEN 301
           G   R +  A +  GSA  N AS +             FT E++  L  L+G   V N
Sbjct: 316 GGAGRSRQQAGRGRGSARANAASSTIGASSTKSSTDQLFTPEQWKALAGLIGNAQVPN 373


>emb|CAN78026.1| hypothetical protein VITISV_032464 [Vitis vinifera]
          Length = 685

 Score = 55.8 bits (133), Expect = 7e-06
 Identities = 35/116 (30%), Positives = 47/116 (40%), Gaps = 20/116 (17%)
 Frame = +2

Query: 8   CTYCKKNGHSVDFCWQKNGTVSTKRPPLVCTHSKKTGHSVDNCYKIIRYPR--------S 163
           C++CKK GH    CW            + C H  K GH  +NCY+I+ YP          
Sbjct: 233 CSHCKKTGHETSTCWSL----------VACPHCHKHGHDKNNCYEIVGYPEGWLDQNKAD 282

Query: 164 GNESREKAIAAQTSGSADDNTASFS------------GFTTEEYAQLRKLLGKQSV 295
           G   R +  A +  GSA  N AS +             FT E++  L  L+G   V
Sbjct: 283 GGAGRSRQQAGRGRGSARANAASSTIGASSTKSSTDQLFTPEQWKALAGLIGNAQV 338