BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00024190
         (366 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF79682.1|AC022314_23 F9C16.18 [Arabidopsis thaliana]              57   2e-06
gb|AAF79665.1|AC022314_6 F9C16.13 [Arabidopsis thaliana]               57   3e-06
gb|AAC26674.1| putative non-LTR retroelement reverse transcripta...    56   6e-06
gb|AAF19536.1|AC007190_4 F23N19.5 [Arabidopsis thaliana]               55   1e-05

>gb|AAF79682.1|AC022314_23 F9C16.18 [Arabidopsis thaliana]
          Length = 196

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 27/69 (39%), Positives = 40/69 (57%)
 Frame = +3

Query: 60  HPLSSFIEQCRGYRFRNWLMQFRYVFKEANCVAYSLA*LAFSFPLGFHVLYKQHMSILPL 239
           HPLS  +  C G+  ++W+++  +V++EAN +A  LA  AF  P+G HV       + PL
Sbjct: 119 HPLSFLVRLCHGFLLKDWIVRISHVYREANRLADGLANYAFLLPIGIHVFVSVPDVVEPL 178

Query: 240 FSLDARGRA 266
           FS D  G A
Sbjct: 179 FSDDVIGSA 187


>gb|AAF79665.1|AC022314_6 F9C16.13 [Arabidopsis thaliana]
          Length = 1172

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 27/69 (39%), Positives = 40/69 (57%)
 Frame = +3

Query: 60  HPLSSFIEQCRGYRFRNWLMQFRYVFKEANCVAYSLA*LAFSFPLGFHVLYKQHMSILPL 239
           HPLS  +  C G+  ++W+++  +V++EAN +A  LA  AF  P+G HV       + PL
Sbjct: 276 HPLSFLVRLCHGFLSKDWIVRISHVYREANRLADGLANYAFLLPIGIHVFVSVPDVVEPL 335

Query: 240 FSLDARGRA 266
           FS D  G A
Sbjct: 336 FSDDVIGSA 344


>gb|AAC26674.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 970

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 28/71 (39%), Positives = 40/71 (56%)
 Frame = +3

Query: 60   HPLSSFIEQCRGYRFRNWLMQFRYVFKEANCVAYSLA*LAFSFPLGFHVLYKQHMSILPL 239
            HPLS  +  C+G+  R+WL++  +V++EAN +A  LA  AF  PLGFH        +L  
Sbjct: 895  HPLSFLVRLCQGFFTRDWLVRVSHVYREANRLADGLANYAFFLPLGFHCFEICPEDVLLF 954

Query: 240  FSLDARGRAIP 272
               DA G + P
Sbjct: 955  LVEDANGTSFP 965


>gb|AAF19536.1|AC007190_4 F23N19.5 [Arabidopsis thaliana]
          Length = 233

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 25/71 (35%), Positives = 40/71 (56%)
 Frame = +3

Query: 60  HPLSSFIEQCRGYRFRNWLMQFRYVFKEANCVAYSLA*LAFSFPLGFHVLYKQHMSILPL 239
           HPLS  +  C G+  R+W+++  +V++EAN +A  LA  AF  PLG+H       S+  +
Sbjct: 158 HPLSFLVRMCHGFLSRDWIVRIGHVYREANRLADGLANYAFDLPLGYHAFASPPNSLDSI 217

Query: 240 FSLDARGRAIP 272
              D  G ++P
Sbjct: 218 LRDDELGISVP 228