BLASTX nr result
ID: Rheum21_contig00024077
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00024077
(594 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004136686.1| PREDICTED: probable ubiquitin conjugation fa... 70 1e-20
gb|EMJ16113.1| hypothetical protein PRUPE_ppa000705mg [Prunus pe... 68 1e-20
ref|XP_006338399.1| PREDICTED: probable ubiquitin conjugation fa... 66 4e-20
ref|XP_003543890.1| PREDICTED: probable ubiquitin conjugation fa... 69 5e-20
ref|XP_003554717.1| PREDICTED: probable ubiquitin conjugation fa... 69 5e-20
ref|XP_004232186.1| PREDICTED: probable ubiquitin conjugation fa... 65 1e-19
ref|XP_006400061.1| hypothetical protein EUTSA_v10012542mg [Eutr... 67 1e-19
gb|ABG89128.1| UFD2 [synthetic construct] 66 3e-19
ref|XP_002532897.1| ubiquitin-protein ligase, putative [Ricinus ... 65 4e-19
ref|XP_004489437.1| PREDICTED: probable ubiquitin conjugation fa... 68 4e-19
gb|ESW23274.1| hypothetical protein PHAVU_004G033100g [Phaseolus... 69 6e-19
ref|XP_002324089.1| U-box domain-containing family protein [Popu... 65 6e-19
ref|XP_006384301.1| hypothetical protein POPTR_0004s12060g [Popu... 64 7e-19
ref|XP_002334768.1| predicted protein [Populus trichocarpa] 64 8e-19
ref|XP_003633847.1| PREDICTED: probable ubiquitin conjugation fa... 65 1e-18
gb|EXB38055.1| putative ubiquitin conjugation factor E4 [Morus n... 66 1e-18
ref|XP_003618612.1| hypothetical protein MTR_6g013690 [Medicago ... 66 2e-18
ref|XP_006347208.1| PREDICTED: probable ubiquitin conjugation fa... 64 3e-18
gb|EOY03576.1| U-box domain-containing protein isoform 1 [Theobr... 66 5e-18
ref|XP_004304262.1| PREDICTED: probable ubiquitin conjugation fa... 65 8e-18
>ref|XP_004136686.1| PREDICTED: probable ubiquitin conjugation factor E4-like [Cucumis
sativus] gi|449494681|ref|XP_004159617.1| PREDICTED:
probable ubiquitin conjugation factor E4-like [Cucumis
sativus]
Length = 1043
Score = 69.7 bits (169), Expect(2) = 1e-20
Identities = 33/39 (84%), Positives = 35/39 (89%)
Frame = +3
Query: 69 TGCLVEATLFEGHQLSLEYLVRNILKLYADIEFTGSHTQ 185
+G V ATLFEGHQLSLEYLVRN+LKLY DIEFTGSHTQ
Sbjct: 657 SGSSVTATLFEGHQLSLEYLVRNLLKLYVDIEFTGSHTQ 695
Score = 56.2 bits (134), Expect(2) = 1e-20
Identities = 25/29 (86%), Positives = 26/29 (89%)
Frame = +2
Query: 2 FMASPEYFRNPYLTAKMVEVLNYWMPRRS 88
FMASPEY RNPYL AKMVEVLN W+PRRS
Sbjct: 629 FMASPEYIRNPYLRAKMVEVLNCWIPRRS 657
>gb|EMJ16113.1| hypothetical protein PRUPE_ppa000705mg [Prunus persica]
Length = 1028
Score = 68.2 bits (165), Expect(2) = 1e-20
Identities = 31/39 (79%), Positives = 35/39 (89%)
Frame = +3
Query: 69 TGCLVEATLFEGHQLSLEYLVRNILKLYADIEFTGSHTQ 185
+G + +TLFEGHQLSLEYLVRN+LKLY DIEFTGSHTQ
Sbjct: 644 SGSSITSTLFEGHQLSLEYLVRNLLKLYVDIEFTGSHTQ 682
Score = 57.8 bits (138), Expect(2) = 1e-20
Identities = 26/29 (89%), Positives = 26/29 (89%)
Frame = +2
Query: 2 FMASPEYFRNPYLTAKMVEVLNYWMPRRS 88
FMASPEY RNPYL AKMVEVLN WMPRRS
Sbjct: 616 FMASPEYIRNPYLRAKMVEVLNCWMPRRS 644
>ref|XP_006338399.1| PREDICTED: probable ubiquitin conjugation factor E4-like [Solanum
tuberosum]
Length = 1040
Score = 66.2 bits (160), Expect(2) = 4e-20
Identities = 30/39 (76%), Positives = 34/39 (87%)
Frame = +3
Query: 69 TGCLVEATLFEGHQLSLEYLVRNILKLYADIEFTGSHTQ 185
+G +TLFEGHQLSLEYLV+N+LKLY DIEFTGSHTQ
Sbjct: 656 SGSTATSTLFEGHQLSLEYLVKNLLKLYVDIEFTGSHTQ 694
Score = 57.8 bits (138), Expect(2) = 4e-20
Identities = 26/29 (89%), Positives = 26/29 (89%)
Frame = +2
Query: 2 FMASPEYFRNPYLTAKMVEVLNYWMPRRS 88
FMASPEY RNPYL AKMVEVLN WMPRRS
Sbjct: 628 FMASPEYIRNPYLRAKMVEVLNCWMPRRS 656
>ref|XP_003543890.1| PREDICTED: probable ubiquitin conjugation factor E4-like [Glycine
max]
Length = 1038
Score = 68.6 bits (166), Expect(2) = 5e-20
Identities = 32/39 (82%), Positives = 34/39 (87%)
Frame = +3
Query: 69 TGCLVEATLFEGHQLSLEYLVRNILKLYADIEFTGSHTQ 185
+G ATLFEGHQLSLEYLVRN+LKLY DIEFTGSHTQ
Sbjct: 656 SGSTATATLFEGHQLSLEYLVRNLLKLYVDIEFTGSHTQ 694
Score = 55.1 bits (131), Expect(2) = 5e-20
Identities = 24/29 (82%), Positives = 26/29 (89%)
Frame = +2
Query: 2 FMASPEYFRNPYLTAKMVEVLNYWMPRRS 88
FMASPE+ +NPYL AKMVEVLN WMPRRS
Sbjct: 628 FMASPEFIKNPYLRAKMVEVLNCWMPRRS 656
>ref|XP_003554717.1| PREDICTED: probable ubiquitin conjugation factor E4-like [Glycine
max]
Length = 1036
Score = 68.6 bits (166), Expect(2) = 5e-20
Identities = 32/39 (82%), Positives = 34/39 (87%)
Frame = +3
Query: 69 TGCLVEATLFEGHQLSLEYLVRNILKLYADIEFTGSHTQ 185
+G ATLFEGHQLSLEYLVRN+LKLY DIEFTGSHTQ
Sbjct: 654 SGSTATATLFEGHQLSLEYLVRNLLKLYVDIEFTGSHTQ 692
Score = 55.1 bits (131), Expect(2) = 5e-20
Identities = 24/29 (82%), Positives = 26/29 (89%)
Frame = +2
Query: 2 FMASPEYFRNPYLTAKMVEVLNYWMPRRS 88
FMASPE+ +NPYL AKMVEVLN WMPRRS
Sbjct: 626 FMASPEFIKNPYLRAKMVEVLNCWMPRRS 654
>ref|XP_004232186.1| PREDICTED: probable ubiquitin conjugation factor E4-like [Solanum
lycopersicum]
Length = 1040
Score = 64.7 bits (156), Expect(2) = 1e-19
Identities = 29/39 (74%), Positives = 34/39 (87%)
Frame = +3
Query: 69 TGCLVEATLFEGHQLSLEYLVRNILKLYADIEFTGSHTQ 185
+G +TLFEGH+LSLEYLV+N+LKLY DIEFTGSHTQ
Sbjct: 656 SGSTATSTLFEGHRLSLEYLVKNLLKLYVDIEFTGSHTQ 694
Score = 57.8 bits (138), Expect(2) = 1e-19
Identities = 26/29 (89%), Positives = 26/29 (89%)
Frame = +2
Query: 2 FMASPEYFRNPYLTAKMVEVLNYWMPRRS 88
FMASPEY RNPYL AKMVEVLN WMPRRS
Sbjct: 628 FMASPEYIRNPYLRAKMVEVLNCWMPRRS 656
>ref|XP_006400061.1| hypothetical protein EUTSA_v10012542mg [Eutrema salsugineum]
gi|557101151|gb|ESQ41514.1| hypothetical protein
EUTSA_v10012542mg [Eutrema salsugineum]
Length = 1036
Score = 67.4 bits (163), Expect(2) = 1e-19
Identities = 31/40 (77%), Positives = 35/40 (87%)
Frame = +3
Query: 66 TTGCLVEATLFEGHQLSLEYLVRNILKLYADIEFTGSHTQ 185
++G +TLFEGHQLSLEYLVRN+LKLY DIEFTGSHTQ
Sbjct: 652 SSGSSATSTLFEGHQLSLEYLVRNLLKLYVDIEFTGSHTQ 691
Score = 55.1 bits (131), Expect(2) = 1e-19
Identities = 25/29 (86%), Positives = 25/29 (86%)
Frame = +2
Query: 2 FMASPEYFRNPYLTAKMVEVLNYWMPRRS 88
FMASPEY RNPYL AKMVEVLN WMPR S
Sbjct: 625 FMASPEYVRNPYLRAKMVEVLNCWMPRSS 653
>gb|ABG89128.1| UFD2 [synthetic construct]
Length = 1037
Score = 65.9 bits (159), Expect(2) = 3e-19
Identities = 30/33 (90%), Positives = 32/33 (96%)
Frame = +3
Query: 87 ATLFEGHQLSLEYLVRNILKLYADIEFTGSHTQ 185
+TLFEGHQLSLEYLVRN+LKLY DIEFTGSHTQ
Sbjct: 660 STLFEGHQLSLEYLVRNLLKLYVDIEFTGSHTQ 692
Score = 55.1 bits (131), Expect(2) = 3e-19
Identities = 25/29 (86%), Positives = 25/29 (86%)
Frame = +2
Query: 2 FMASPEYFRNPYLTAKMVEVLNYWMPRRS 88
FMASPEY RNPYL AKMVEVLN WMPR S
Sbjct: 626 FMASPEYVRNPYLRAKMVEVLNCWMPRSS 654
>ref|XP_002532897.1| ubiquitin-protein ligase, putative [Ricinus communis]
gi|223527331|gb|EEF29477.1| ubiquitin-protein ligase,
putative [Ricinus communis]
Length = 1031
Score = 65.1 bits (157), Expect(2) = 4e-19
Identities = 30/33 (90%), Positives = 31/33 (93%)
Frame = +3
Query: 87 ATLFEGHQLSLEYLVRNILKLYADIEFTGSHTQ 185
ATLFEGH LSLEYLVRN+LKLY DIEFTGSHTQ
Sbjct: 653 ATLFEGHHLSLEYLVRNLLKLYVDIEFTGSHTQ 685
Score = 55.5 bits (132), Expect(2) = 4e-19
Identities = 25/29 (86%), Positives = 25/29 (86%)
Frame = +2
Query: 2 FMASPEYFRNPYLTAKMVEVLNYWMPRRS 88
FMASP Y RNPYL AKMVEVLN WMPRRS
Sbjct: 619 FMASPTYIRNPYLRAKMVEVLNCWMPRRS 647
>ref|XP_004489437.1| PREDICTED: probable ubiquitin conjugation factor E4-like [Cicer
arietinum]
Length = 1030
Score = 68.2 bits (165), Expect(2) = 4e-19
Identities = 32/39 (82%), Positives = 34/39 (87%)
Frame = +3
Query: 69 TGCLVEATLFEGHQLSLEYLVRNILKLYADIEFTGSHTQ 185
+G ATLFEGHQLSLEYLVRN+LKLY DIEFTGSHTQ
Sbjct: 645 SGSSATATLFEGHQLSLEYLVRNLLKLYVDIEFTGSHTQ 683
Score = 52.4 bits (124), Expect(2) = 4e-19
Identities = 22/29 (75%), Positives = 25/29 (86%)
Frame = +2
Query: 2 FMASPEYFRNPYLTAKMVEVLNYWMPRRS 88
FM SP++ +NPYL AKMVEVLN WMPRRS
Sbjct: 617 FMGSPDFIKNPYLRAKMVEVLNNWMPRRS 645
>gb|ESW23274.1| hypothetical protein PHAVU_004G033100g [Phaseolus vulgaris]
Length = 1042
Score = 68.6 bits (166), Expect(2) = 6e-19
Identities = 32/39 (82%), Positives = 34/39 (87%)
Frame = +3
Query: 69 TGCLVEATLFEGHQLSLEYLVRNILKLYADIEFTGSHTQ 185
+G ATLFEGHQLSLEYLVRN+LKLY DIEFTGSHTQ
Sbjct: 658 SGSTAAATLFEGHQLSLEYLVRNLLKLYVDIEFTGSHTQ 696
Score = 51.6 bits (122), Expect(2) = 6e-19
Identities = 23/29 (79%), Positives = 25/29 (86%)
Frame = +2
Query: 2 FMASPEYFRNPYLTAKMVEVLNYWMPRRS 88
FMAS E+ +NPYL AKMVEVLN WMPRRS
Sbjct: 630 FMASHEFIKNPYLRAKMVEVLNCWMPRRS 658
>ref|XP_002324089.1| U-box domain-containing family protein [Populus trichocarpa]
gi|222867091|gb|EEF04222.1| U-box domain-containing
family protein [Populus trichocarpa]
Length = 1019
Score = 64.7 bits (156), Expect(2) = 6e-19
Identities = 30/39 (76%), Positives = 33/39 (84%)
Frame = +3
Query: 69 TGCLVEATLFEGHQLSLEYLVRNILKLYADIEFTGSHTQ 185
+G A+LFEGH LSLEYLVRN+LKLY DIEFTGSHTQ
Sbjct: 635 SGSSATASLFEGHHLSLEYLVRNLLKLYVDIEFTGSHTQ 673
Score = 55.5 bits (132), Expect(2) = 6e-19
Identities = 25/29 (86%), Positives = 25/29 (86%)
Frame = +2
Query: 2 FMASPEYFRNPYLTAKMVEVLNYWMPRRS 88
FMASP Y RNPYL AKMVEVLN WMPRRS
Sbjct: 607 FMASPTYIRNPYLRAKMVEVLNCWMPRRS 635
>ref|XP_006384301.1| hypothetical protein POPTR_0004s12060g [Populus trichocarpa]
gi|550340866|gb|ERP62098.1| hypothetical protein
POPTR_0004s12060g [Populus trichocarpa]
Length = 1020
Score = 64.3 bits (155), Expect(2) = 7e-19
Identities = 30/39 (76%), Positives = 33/39 (84%)
Frame = +3
Query: 69 TGCLVEATLFEGHQLSLEYLVRNILKLYADIEFTGSHTQ 185
+G A+LFEGHQLSLEYLVRN+LKLY DIE TGSHTQ
Sbjct: 636 SGSSATASLFEGHQLSLEYLVRNLLKLYVDIELTGSHTQ 674
Score = 55.5 bits (132), Expect(2) = 7e-19
Identities = 25/29 (86%), Positives = 25/29 (86%)
Frame = +2
Query: 2 FMASPEYFRNPYLTAKMVEVLNYWMPRRS 88
FMASP Y RNPYL AKMVEVLN WMPRRS
Sbjct: 608 FMASPTYIRNPYLRAKMVEVLNCWMPRRS 636
>ref|XP_002334768.1| predicted protein [Populus trichocarpa]
Length = 273
Score = 64.3 bits (155), Expect(2) = 8e-19
Identities = 30/39 (76%), Positives = 33/39 (84%)
Frame = +3
Query: 69 TGCLVEATLFEGHQLSLEYLVRNILKLYADIEFTGSHTQ 185
+G A+LFEGHQLSLEYLVRN+LKLY DIE TGSHTQ
Sbjct: 230 SGSSATASLFEGHQLSLEYLVRNLLKLYVDIELTGSHTQ 268
Score = 55.5 bits (132), Expect(2) = 8e-19
Identities = 25/29 (86%), Positives = 25/29 (86%)
Frame = +2
Query: 2 FMASPEYFRNPYLTAKMVEVLNYWMPRRS 88
FMASP Y RNPYL AKMVEVLN WMPRRS
Sbjct: 202 FMASPTYIRNPYLRAKMVEVLNCWMPRRS 230
>ref|XP_003633847.1| PREDICTED: probable ubiquitin conjugation factor E4-like [Vitis
vinifera] gi|296082973|emb|CBI22274.3| unnamed protein
product [Vitis vinifera]
Length = 1037
Score = 65.1 bits (157), Expect(2) = 1e-18
Identities = 30/39 (76%), Positives = 33/39 (84%)
Frame = +3
Query: 69 TGCLVEATLFEGHQLSLEYLVRNILKLYADIEFTGSHTQ 185
+G TLFEGH+LSLEYLVRN+LKLY DIEFTGSHTQ
Sbjct: 652 SGSSATTTLFEGHRLSLEYLVRNLLKLYVDIEFTGSHTQ 690
Score = 54.3 bits (129), Expect(2) = 1e-18
Identities = 24/29 (82%), Positives = 25/29 (86%)
Frame = +2
Query: 2 FMASPEYFRNPYLTAKMVEVLNYWMPRRS 88
FMASP + RNPYL AKMVEVLN WMPRRS
Sbjct: 624 FMASPNFIRNPYLRAKMVEVLNCWMPRRS 652
>gb|EXB38055.1| putative ubiquitin conjugation factor E4 [Morus notabilis]
Length = 1070
Score = 66.2 bits (160), Expect(2) = 1e-18
Identities = 31/38 (81%), Positives = 33/38 (86%)
Frame = +3
Query: 72 GCLVEATLFEGHQLSLEYLVRNILKLYADIEFTGSHTQ 185
G A+LFEGHQLSLEYLVRN+LKLY DIEFTGSHTQ
Sbjct: 683 GSSATASLFEGHQLSLEYLVRNLLKLYVDIEFTGSHTQ 720
Score = 52.8 bits (125), Expect(2) = 1e-18
Identities = 24/31 (77%), Positives = 25/31 (80%)
Frame = +2
Query: 2 FMASPEYFRNPYLTAKMVEVLNYWMPRRSYL 94
FMASP Y RNPYL AKMV VLN WMPR+S L
Sbjct: 651 FMASPNYIRNPYLRAKMVGVLNCWMPRKSEL 681
>ref|XP_003618612.1| hypothetical protein MTR_6g013690 [Medicago truncatula]
gi|355493627|gb|AES74830.1| hypothetical protein
MTR_6g013690 [Medicago truncatula]
Length = 746
Score = 65.9 bits (159), Expect(2) = 2e-18
Identities = 30/39 (76%), Positives = 34/39 (87%)
Frame = +3
Query: 69 TGCLVEATLFEGHQLSLEYLVRNILKLYADIEFTGSHTQ 185
+G +TLFEGHQLSL+YLVRN+LKLY DIEFTGSHTQ
Sbjct: 388 SGSSATSTLFEGHQLSLQYLVRNLLKLYVDIEFTGSHTQ 426
Score = 52.4 bits (124), Expect(2) = 2e-18
Identities = 22/29 (75%), Positives = 25/29 (86%)
Frame = +2
Query: 2 FMASPEYFRNPYLTAKMVEVLNYWMPRRS 88
FM SP++ +NPYL AKMVEVLN WMPRRS
Sbjct: 360 FMGSPDFIKNPYLRAKMVEVLNNWMPRRS 388
>ref|XP_006347208.1| PREDICTED: probable ubiquitin conjugation factor E4-like [Solanum
tuberosum]
Length = 1019
Score = 63.5 bits (153), Expect(2) = 3e-18
Identities = 28/33 (84%), Positives = 32/33 (96%)
Frame = +3
Query: 87 ATLFEGHQLSLEYLVRNILKLYADIEFTGSHTQ 185
+TLFEGHQLSL+YLV+N+LKLY DIEFTGSHTQ
Sbjct: 661 STLFEGHQLSLQYLVKNLLKLYVDIEFTGSHTQ 693
Score = 54.3 bits (129), Expect(2) = 3e-18
Identities = 24/27 (88%), Positives = 24/27 (88%)
Frame = +2
Query: 2 FMASPEYFRNPYLTAKMVEVLNYWMPR 82
FMASPEY RNPYL AKMVEVLN WMPR
Sbjct: 627 FMASPEYIRNPYLRAKMVEVLNCWMPR 653
>gb|EOY03576.1| U-box domain-containing protein isoform 1 [Theobroma cacao]
gi|508711680|gb|EOY03577.1| U-box domain-containing
protein isoform 1 [Theobroma cacao]
Length = 1042
Score = 65.9 bits (159), Expect(2) = 5e-18
Identities = 30/39 (76%), Positives = 34/39 (87%)
Frame = +3
Query: 69 TGCLVEATLFEGHQLSLEYLVRNILKLYADIEFTGSHTQ 185
+G +TLF+GHQLSLEYLVRN+LKLY DIEFTGSHTQ
Sbjct: 658 SGSSATSTLFDGHQLSLEYLVRNLLKLYVDIEFTGSHTQ 696
Score = 51.2 bits (121), Expect(2) = 5e-18
Identities = 22/29 (75%), Positives = 25/29 (86%)
Frame = +2
Query: 2 FMASPEYFRNPYLTAKMVEVLNYWMPRRS 88
FMASP++ +NPYL AKMVEVLN WMPR S
Sbjct: 630 FMASPQFIKNPYLRAKMVEVLNCWMPRGS 658
>ref|XP_004304262.1| PREDICTED: probable ubiquitin conjugation factor E4-like [Fragaria
vesca subsp. vesca]
Length = 1031
Score = 65.5 bits (158), Expect(2) = 8e-18
Identities = 30/33 (90%), Positives = 32/33 (96%)
Frame = +3
Query: 87 ATLFEGHQLSLEYLVRNILKLYADIEFTGSHTQ 185
A+LFEGHQLSLEYLVRN+LKLY DIEFTGSHTQ
Sbjct: 654 ASLFEGHQLSLEYLVRNLLKLYVDIEFTGSHTQ 686
Score = 50.8 bits (120), Expect(2) = 8e-18
Identities = 24/30 (80%), Positives = 25/30 (83%)
Frame = +2
Query: 2 FMASPEYFRNPYLTAKMVEVLNYWMPRRSY 91
FMASPEY RNPYL AKMVEVLN MPR S+
Sbjct: 615 FMASPEYIRNPYLRAKMVEVLNCLMPRPSH 644