BLASTX nr result
ID: Rheum21_contig00024074
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00024074
(426 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006367250.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 77 2e-12
ref|XP_003635631.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 75 9e-12
ref|XP_002263561.2| PREDICTED: DEAD-box ATP-dependent RNA helica... 75 9e-12
emb|CBI35756.3| unnamed protein product [Vitis vinifera] 75 9e-12
ref|XP_002264701.2| PREDICTED: DEAD-box ATP-dependent RNA helica... 75 9e-12
emb|CBI30196.3| unnamed protein product [Vitis vinifera] 75 9e-12
ref|XP_004249589.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 74 2e-11
ref|XP_003558774.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 70 2e-10
ref|XP_004238462.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 70 3e-10
gb|EMT22547.1| DEAD-box ATP-dependent RNA helicase 38 [Aegilops ... 69 8e-10
gb|EOY08038.1| P-loop containing nucleoside triphosphate hydrola... 68 1e-09
ref|XP_004306168.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 68 1e-09
gb|ADG27844.1| RNA helicase-like protein [Gossypium hirsutum] 68 1e-09
ref|XP_002519437.1| dead box ATP-dependent RNA helicase, putativ... 67 2e-09
gb|EMT25441.1| DEAD-box ATP-dependent RNA helicase 38 [Aegilops ... 66 5e-09
gb|EMS56339.1| DEAD-box ATP-dependent RNA helicase 38 [Triticum ... 66 5e-09
dbj|BAK02259.1| predicted protein [Hordeum vulgare subsp. vulgare] 66 5e-09
gb|ESW23282.1| hypothetical protein PHAVU_004G033700g [Phaseolus... 65 7e-09
ref|XP_004506252.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 65 9e-09
ref|XP_003552095.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 64 2e-08
>ref|XP_006367250.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 38-like [Solanum
tuberosum]
Length = 514
Score = 77.4 bits (189), Expect = 2e-12
Identities = 34/44 (77%), Positives = 38/44 (86%)
Frame = +1
Query: 1 GRAGRFGRKGAVFNLLCMDTDDKLMAKIEQHFGMQVAEVPSWNS 132
GRAGRFGRKGA+FNLLC D D+ LM+KIE HF QVAE+PSWNS
Sbjct: 457 GRAGRFGRKGAIFNLLCSDRDNMLMSKIENHFNHQVAEIPSWNS 500
>ref|XP_003635631.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 38-like, partial
[Vitis vinifera]
Length = 242
Score = 75.1 bits (183), Expect = 9e-12
Identities = 32/44 (72%), Positives = 39/44 (88%)
Frame = +1
Query: 1 GRAGRFGRKGAVFNLLCMDTDDKLMAKIEQHFGMQVAEVPSWNS 132
GRAGRFGRKGAVFNLLC D D+ L++KIE HFG+Q+AE+PSW +
Sbjct: 185 GRAGRFGRKGAVFNLLCSDKDNILISKIENHFGVQIAEIPSWQN 228
>ref|XP_002263561.2| PREDICTED: DEAD-box ATP-dependent RNA helicase 38 [Vitis vinifera]
Length = 97
Score = 75.1 bits (183), Expect = 9e-12
Identities = 32/44 (72%), Positives = 39/44 (88%)
Frame = +1
Query: 1 GRAGRFGRKGAVFNLLCMDTDDKLMAKIEQHFGMQVAEVPSWNS 132
GRAGRFGRKGAVFNLLC D D+ L++KIE HFG+Q+AE+PSW +
Sbjct: 40 GRAGRFGRKGAVFNLLCSDKDNILISKIENHFGVQIAEIPSWQN 83
>emb|CBI35756.3| unnamed protein product [Vitis vinifera]
Length = 140
Score = 75.1 bits (183), Expect = 9e-12
Identities = 32/44 (72%), Positives = 39/44 (88%)
Frame = +1
Query: 1 GRAGRFGRKGAVFNLLCMDTDDKLMAKIEQHFGMQVAEVPSWNS 132
GRAGRFGRKGAVFNLLC D D+ L++KIE HFG+Q+AE+PSW +
Sbjct: 83 GRAGRFGRKGAVFNLLCSDKDNILISKIENHFGVQIAEIPSWQN 126
>ref|XP_002264701.2| PREDICTED: DEAD-box ATP-dependent RNA helicase 38-like [Vitis
vinifera] gi|297740016|emb|CBI30198.3| unnamed protein
product [Vitis vinifera]
Length = 473
Score = 75.1 bits (183), Expect = 9e-12
Identities = 32/44 (72%), Positives = 39/44 (88%)
Frame = +1
Query: 1 GRAGRFGRKGAVFNLLCMDTDDKLMAKIEQHFGMQVAEVPSWNS 132
GRAGRFGRKGAVFNLLC D D+ L++KIE HFG+Q+AE+PSW +
Sbjct: 416 GRAGRFGRKGAVFNLLCSDKDNILISKIENHFGVQIAEIPSWQN 459
>emb|CBI30196.3| unnamed protein product [Vitis vinifera]
Length = 244
Score = 75.1 bits (183), Expect = 9e-12
Identities = 32/44 (72%), Positives = 39/44 (88%)
Frame = +1
Query: 1 GRAGRFGRKGAVFNLLCMDTDDKLMAKIEQHFGMQVAEVPSWNS 132
GRAGRFGRKGAVFNLLC D D+ L++KIE HFG+Q+AE+PSW +
Sbjct: 187 GRAGRFGRKGAVFNLLCSDKDNILISKIENHFGVQIAEIPSWQN 230
>ref|XP_004249589.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 38-like [Solanum
lycopersicum]
Length = 508
Score = 74.3 bits (181), Expect = 2e-11
Identities = 32/44 (72%), Positives = 38/44 (86%)
Frame = +1
Query: 1 GRAGRFGRKGAVFNLLCMDTDDKLMAKIEQHFGMQVAEVPSWNS 132
GRAGRFGRKGA+FNLLC D D+ LM+KIE HF QVAE+PSW++
Sbjct: 451 GRAGRFGRKGAIFNLLCSDRDNMLMSKIENHFNHQVAEIPSWSN 494
>ref|XP_003558774.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 38-like
[Brachypodium distachyon]
Length = 508
Score = 70.5 bits (171), Expect = 2e-10
Identities = 32/44 (72%), Positives = 36/44 (81%)
Frame = +1
Query: 1 GRAGRFGRKGAVFNLLCMDTDDKLMAKIEQHFGMQVAEVPSWNS 132
GRAGRFGRKGAVFNLLC DTDD +M KIE +F +V EVP+W S
Sbjct: 450 GRAGRFGRKGAVFNLLCGDTDDNVMTKIENYFQHKVPEVPNWKS 493
>ref|XP_004238462.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 38-like [Solanum
lycopersicum]
Length = 499
Score = 70.1 bits (170), Expect = 3e-10
Identities = 33/44 (75%), Positives = 37/44 (84%)
Frame = +1
Query: 1 GRAGRFGRKGAVFNLLCMDTDDKLMAKIEQHFGMQVAEVPSWNS 132
GRAGRFGRKGA+FNLLC D D+ LM+KIE HF QVAE+ SWNS
Sbjct: 443 GRAGRFGRKGAIFNLLCSDRDNMLMSKIENHFNHQVAEI-SWNS 485
>gb|EMT22547.1| DEAD-box ATP-dependent RNA helicase 38 [Aegilops tauschii]
Length = 477
Score = 68.6 bits (166), Expect = 8e-10
Identities = 32/44 (72%), Positives = 36/44 (81%)
Frame = +1
Query: 1 GRAGRFGRKGAVFNLLCMDTDDKLMAKIEQHFGMQVAEVPSWNS 132
GRAGRFG+KGAVFNLLC +TDD LM KIE +F +V EVPSW S
Sbjct: 419 GRAGRFGQKGAVFNLLCGETDDILMTKIENYFQHKVQEVPSWES 462
>gb|EOY08038.1| P-loop containing nucleoside triphosphate hydrolases superfamily
protein [Theobroma cacao]
Length = 502
Score = 68.2 bits (165), Expect = 1e-09
Identities = 30/44 (68%), Positives = 35/44 (79%)
Frame = +1
Query: 1 GRAGRFGRKGAVFNLLCMDTDDKLMAKIEQHFGMQVAEVPSWNS 132
GRAGRFGRKGAVFNLLC D D +M+KIE HFG ++AEV W +
Sbjct: 445 GRAGRFGRKGAVFNLLCGDMDRMIMSKIENHFGTKIAEVADWRN 488
>ref|XP_004306168.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 38-like [Fragaria
vesca subsp. vesca]
Length = 473
Score = 67.8 bits (164), Expect = 1e-09
Identities = 30/44 (68%), Positives = 37/44 (84%)
Frame = +1
Query: 1 GRAGRFGRKGAVFNLLCMDTDDKLMAKIEQHFGMQVAEVPSWNS 132
GRAGRFG KGAVFNLLC+DTD +MA IE+++ +QV EV +WNS
Sbjct: 416 GRAGRFGSKGAVFNLLCLDTDKLVMANIERYYNIQVPEVNTWNS 459
>gb|ADG27844.1| RNA helicase-like protein [Gossypium hirsutum]
Length = 501
Score = 67.8 bits (164), Expect = 1e-09
Identities = 29/44 (65%), Positives = 35/44 (79%)
Frame = +1
Query: 1 GRAGRFGRKGAVFNLLCMDTDDKLMAKIEQHFGMQVAEVPSWNS 132
GRAGRFGRKGAVFNLLC D D +++KIE HF ++AEVP W +
Sbjct: 444 GRAGRFGRKGAVFNLLCGDMDQMIISKIENHFDSKIAEVPDWRN 487
>ref|XP_002519437.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223541300|gb|EEF42851.1| dead box ATP-dependent RNA
helicase, putative [Ricinus communis]
Length = 503
Score = 67.0 bits (162), Expect = 2e-09
Identities = 28/44 (63%), Positives = 36/44 (81%)
Frame = +1
Query: 1 GRAGRFGRKGAVFNLLCMDTDDKLMAKIEQHFGMQVAEVPSWNS 132
GRAGRFGRKGAVFN + D+D +M KI+++FG +V E+PSWNS
Sbjct: 446 GRAGRFGRKGAVFNFVMFDSDSTIMEKIDRYFGTRVTEIPSWNS 489
>gb|EMT25441.1| DEAD-box ATP-dependent RNA helicase 38 [Aegilops tauschii]
Length = 435
Score = 65.9 bits (159), Expect = 5e-09
Identities = 30/44 (68%), Positives = 35/44 (79%)
Frame = +1
Query: 1 GRAGRFGRKGAVFNLLCMDTDDKLMAKIEQHFGMQVAEVPSWNS 132
GRAGRFGRKGAVFNLLC TD+ +M KIE +F +V EVP+W S
Sbjct: 377 GRAGRFGRKGAVFNLLCGQTDEVVMTKIEDYFQHKVPEVPNWKS 420
>gb|EMS56339.1| DEAD-box ATP-dependent RNA helicase 38 [Triticum urartu]
Length = 526
Score = 65.9 bits (159), Expect = 5e-09
Identities = 30/44 (68%), Positives = 35/44 (79%)
Frame = +1
Query: 1 GRAGRFGRKGAVFNLLCMDTDDKLMAKIEQHFGMQVAEVPSWNS 132
GRAGRFGRKGAVFNLLC TD+ +M KIE +F +V EVP+W S
Sbjct: 468 GRAGRFGRKGAVFNLLCGQTDEVVMTKIEDYFQHKVPEVPNWKS 511
>dbj|BAK02259.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 506
Score = 65.9 bits (159), Expect = 5e-09
Identities = 30/44 (68%), Positives = 35/44 (79%)
Frame = +1
Query: 1 GRAGRFGRKGAVFNLLCMDTDDKLMAKIEQHFGMQVAEVPSWNS 132
GRAGRFGRKGAVFNLLC TD+ +M KIE +F +V EVP+W S
Sbjct: 448 GRAGRFGRKGAVFNLLCGQTDEVVMTKIEDYFQHKVPEVPNWKS 491
>gb|ESW23282.1| hypothetical protein PHAVU_004G033700g [Phaseolus vulgaris]
Length = 495
Score = 65.5 bits (158), Expect = 7e-09
Identities = 29/39 (74%), Positives = 35/39 (89%)
Frame = +1
Query: 1 GRAGRFGRKGAVFNLLCMDTDDKLMAKIEQHFGMQVAEV 117
GRAGRFGRKGAVFNL+C + D++LM+KIE HFG +VAEV
Sbjct: 438 GRAGRFGRKGAVFNLICDEKDERLMSKIENHFGTRVAEV 476
>ref|XP_004506252.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 38-like [Cicer
arietinum]
Length = 491
Score = 65.1 bits (157), Expect = 9e-09
Identities = 30/39 (76%), Positives = 33/39 (84%)
Frame = +1
Query: 1 GRAGRFGRKGAVFNLLCMDTDDKLMAKIEQHFGMQVAEV 117
GRAGRFGRKGAVFNLLC + D+KLM+KIE HFG V EV
Sbjct: 434 GRAGRFGRKGAVFNLLCDERDEKLMSKIENHFGTHVKEV 472
>ref|XP_003552095.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 38-like isoform X1
[Glycine max] gi|571546239|ref|XP_006602457.1|
PREDICTED: DEAD-box ATP-dependent RNA helicase 38-like
isoform X2 [Glycine max]
Length = 488
Score = 63.9 bits (154), Expect = 2e-08
Identities = 28/39 (71%), Positives = 34/39 (87%)
Frame = +1
Query: 1 GRAGRFGRKGAVFNLLCMDTDDKLMAKIEQHFGMQVAEV 117
GRAGRFGRKGAVFNL+C + D++LM+KIE HFG +V EV
Sbjct: 431 GRAGRFGRKGAVFNLICGELDERLMSKIENHFGTRVTEV 469