BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00024009
         (544 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006605035.1| PREDICTED: uncharacterized protein LOC102664...   150   2e-34
gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hop...    67   1e-14
gb|AAP94600.1| putative copia-like retrotransposon Hopscotch pol...    67   1e-14
ref|XP_004252705.1| PREDICTED: uncharacterized protein LOC101266...    84   2e-14
ref|XP_004248587.1| PREDICTED: uncharacterized protein LOC101255...    84   2e-14
emb|CAN63649.1| hypothetical protein VITISV_037657 [Vitis vinifera]    82   8e-14
gb|ABF96081.1| retrotransposon protein, putative, Ty1-copia subc...    72   6e-13
emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera]    79   7e-13
emb|CAN67403.1| hypothetical protein VITISV_025614 [Vitis vinifera]    79   7e-13
emb|CDH30699.1| putative Ty1-copia-like retrotransposon [Cercis ...    76   6e-12
emb|CAN79381.1| hypothetical protein VITISV_010747 [Vitis vinifera]    74   2e-11
ref|XP_004240274.1| PREDICTED: uncharacterized protein LOC101246...    74   3e-11
ref|XP_002449872.1| hypothetical protein SORBIDRAFT_05g024695 [S...    73   5e-11
emb|CAN68496.1| hypothetical protein VITISV_010947 [Vitis vinifera]    60   5e-11
gb|AAT69582.1| putative polyprotein [Oryza sativa Japonica Group...    71   1e-10
gb|ABA94311.1| retrotransposon protein, putative, Ty1-copia subc...    71   2e-10
gb|ACN32036.1| unknown [Zea mays]                                      71   2e-10
gb|ACL54615.1| unknown [Zea mays]                                      71   2e-10
emb|CAN62182.1| hypothetical protein VITISV_044400 [Vitis vinifera]    65   2e-10
emb|CAN77126.1| hypothetical protein VITISV_013628 [Vitis vinifera]    70   2e-10

>ref|XP_006605035.1| PREDICTED: uncharacterized protein LOC102664868 [Glycine max]
          Length = 471

 Score =  150 bits (379), Expect = 2e-34
 Identities = 67/86 (77%), Positives = 73/86 (84%)
 Frame = -1

Query: 427 CQLCNKPGHEAINCWQRANQTDYPSRRPNPRDQSRQANIANYGSPSTVMDPSWYFDTGAT 248
           CQLC+KPGHEAINCWQR NQTDYPSRR NPR  SRQAN+A  G+ S VMDPSWYFDTGAT
Sbjct: 281 CQLCSKPGHEAINCWQRTNQTDYPSRRANPRVSSRQANVAQTGTSSIVMDPSWYFDTGAT 340

Query: 247 DHVSPDIGKLSITEPYSGDDKLQVGN 170
           DHV+PDI KL+I   Y+ DDKLQVGN
Sbjct: 341 DHVTPDISKLTIANDYTDDDKLQVGN 366


>gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hopscotch polyprotein [Zea
           mays]
          Length = 1313

 Score = 67.4 bits (163), Expect(2) = 1e-14
 Identities = 32/88 (36%), Positives = 47/88 (53%)
 Frame = -1

Query: 427 CQLCNKPGHEAINCWQRANQTDYPSRRPNPRDQSRQANIANYGSPSTVMDPSWYFDTGAT 248
           CQ+C K GH A  CW R  +   P  +           +A   + S  +D +WY DTGAT
Sbjct: 254 CQVCFKKGHTAARCWHRFEEDFVPDEK-----------LAGAATNSYHVDTNWYTDTGAT 302

Query: 247 DHVSPDIGKLSITEPYSGDDKLQVGNDS 164
           DH++ ++ KLSI E Y+G D++   + S
Sbjct: 303 DHITGELEKLSIREKYAGGDQIHTASGS 330



 Score = 37.7 bits (86), Expect(2) = 1e-14
 Identities = 19/50 (38%), Positives = 30/50 (60%)
 Frame = -2

Query: 150 ILHGHVENGLYRLSPSTNKISSTMALSGVRTTLTGWHQRLAHPHESILRR 1
           +L G    GLY + P+T+ I +  AL  V+ +++ WH RL HP   I+R+
Sbjct: 354 LLKGRCHKGLYPI-PATSTIKN--ALGAVKPSMSRWHNRLGHPSSFIVRQ 400


>gb|AAP94600.1| putative copia-like retrotransposon Hopscotch polyprotein [Zea
           mays]
          Length = 969

 Score = 67.4 bits (163), Expect(2) = 1e-14
 Identities = 32/88 (36%), Positives = 47/88 (53%)
 Frame = -1

Query: 427 CQLCNKPGHEAINCWQRANQTDYPSRRPNPRDQSRQANIANYGSPSTVMDPSWYFDTGAT 248
           CQ+C K GH A  CW R  +   P  +           +A   + S  +D +WY DTGAT
Sbjct: 254 CQVCFKKGHTAARCWHRFEEDFVPDEK-----------LAGAATNSYHVDTNWYTDTGAT 302

Query: 247 DHVSPDIGKLSITEPYSGDDKLQVGNDS 164
           DH++ ++ KLSI E Y+G D++   + S
Sbjct: 303 DHITGELEKLSIREKYAGGDQIHTASGS 330



 Score = 37.7 bits (86), Expect(2) = 1e-14
 Identities = 19/50 (38%), Positives = 30/50 (60%)
 Frame = -2

Query: 150 ILHGHVENGLYRLSPSTNKISSTMALSGVRTTLTGWHQRLAHPHESILRR 1
           +L G    GLY + P+T+ I +  AL  V+ +++ WH RL HP   I+R+
Sbjct: 354 LLKGRCHKGLYPI-PATSTIKN--ALGAVKPSMSRWHNRLGHPSSFIVRQ 400


>ref|XP_004252705.1| PREDICTED: uncharacterized protein LOC101266915 [Solanum
           lycopersicum]
          Length = 544

 Score = 84.3 bits (207), Expect = 2e-14
 Identities = 38/88 (43%), Positives = 55/88 (62%), Gaps = 2/88 (2%)
 Frame = -1

Query: 427 CQLCNKPGHEAINCWQRANQTDYPSRRPNPRDQSRQANIANYG--SPSTVMDPSWYFDTG 254
           CQ+C KP H A NC+ R N   YP  R + R Q+     +     SPS ++D SW+ D+G
Sbjct: 289 CQICEKPNHHARNCYNRNNMDTYPPTRSSNRPQANMVTPSTNSMMSPSAIIDNSWFADSG 348

Query: 253 ATDHVSPDIGKLSITEPYSGDDKLQVGN 170
           AT+HV+ D+ +LSI   Y+G+D+L +GN
Sbjct: 349 ATNHVTSDLSQLSIHMDYNGEDQLALGN 376


>ref|XP_004248587.1| PREDICTED: uncharacterized protein LOC101255439 [Solanum
           lycopersicum]
          Length = 318

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 43/88 (48%), Positives = 53/88 (60%)
 Frame = -1

Query: 427 CQLCNKPGHEAINCWQRANQTDYPSRRPNPRDQSRQANIANYGSPSTVMDPSWYFDTGAT 248
           CQ+C K  H A NC+ R N    P+  P P     QAN+A   S S  +DPSW  D+GAT
Sbjct: 214 CQICEKLDHLAKNCYNRYNDQYPPTNTPRP-----QANVAT--SSSAFLDPSWCLDSGAT 266

Query: 247 DHVSPDIGKLSITEPYSGDDKLQVGNDS 164
           +HV+ D+G LSI   YSG+D L VGN S
Sbjct: 267 NHVTADVGNLSIASDYSGNDSLAVGNGS 294


>emb|CAN63649.1| hypothetical protein VITISV_037657 [Vitis vinifera]
          Length = 1131

 Score = 82.0 bits (201), Expect = 8e-14
 Identities = 40/87 (45%), Positives = 54/87 (62%)
 Frame = -1

Query: 430 QCQLCNKPGHEAINCWQRANQTDYPSRRPNPRDQSRQANIANYGSPSTVMDPSWYFDTGA 251
           QCQ+C K GH AINC+ R +QT  P+   +          A   +PSTV D SWY DTGA
Sbjct: 255 QCQVCGKYGHIAINCYHRFDQTYQPTMNNHLA--------AMVATPSTVGDESWYMDTGA 306

Query: 250 TDHVSPDIGKLSITEPYSGDDKLQVGN 170
           T H++P++ KL+   P++G DK+ VGN
Sbjct: 307 THHLTPNLNKLNSHTPFAGSDKVMVGN 333


>gb|ABF96081.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1180

 Score = 72.4 bits (176), Expect(2) = 6e-13
 Identities = 34/87 (39%), Positives = 50/87 (57%)
 Frame = -1

Query: 430 QCQLCNKPGHEAINCWQRANQTDYPSRRPNPRDQSRQANIANYGSPSTVMDPSWYFDTGA 251
           +CQLC K GH  I+CW R ++   P       D+      A+YG     +D +WY DTGA
Sbjct: 276 KCQLCYKRGHTVIDCWYRYDEDFVP-------DEKYAGTAASYG-----VDSNWYVDTGA 323

Query: 250 TDHVSPDIGKLSITEPYSGDDKLQVGN 170
           TDH++ ++ KL+I + Y G D++Q  N
Sbjct: 324 TDHITGELEKLTIRDKYKGQDQVQAAN 350



 Score = 26.9 bits (58), Expect(2) = 6e-13
 Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
 Frame = -2

Query: 150 ILHGHVENGLYRL-SPSTNKISSTMALSGVRTTLTGWHQRLAHPHESILRR 1
           +L G     L+ L S S +      AL+    +L  WH RL HP  +I  +
Sbjct: 360 LLRGRCRGRLFPLPSSSPSAHQDKEALAATTPSLERWHCRLGHPSYAIAEK 410


>emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera]
          Length = 1449

 Score = 79.0 bits (193), Expect = 7e-13
 Identities = 40/96 (41%), Positives = 54/96 (56%), Gaps = 9/96 (9%)
 Frame = -1

Query: 430 QCQLCNKPGHEAINCWQR---------ANQTDYPSRRPNPRDQSRQANIANYGSPSTVMD 278
           QCQLC K GH  + C+ R          N     + +PN ++Q +    A   SPST+ D
Sbjct: 320 QCQLCGKFGHTVVRCYHRFDINFQGYNPNMDTVQTNKPNAKNQVQ----AMMASPSTISD 375

Query: 277 PSWYFDTGATDHVSPDIGKLSITEPYSGDDKLQVGN 170
            +W+FDTGAT H+S  I  LS  +PY G+DK+ VGN
Sbjct: 376 EAWFFDTGATHHLSQSIDPLSDVQPYMGNDKVIVGN 411


>emb|CAN67403.1| hypothetical protein VITISV_025614 [Vitis vinifera]
          Length = 1271

 Score = 79.0 bits (193), Expect = 7e-13
 Identities = 40/96 (41%), Positives = 54/96 (56%), Gaps = 9/96 (9%)
 Frame = -1

Query: 430 QCQLCNKPGHEAINCWQR---------ANQTDYPSRRPNPRDQSRQANIANYGSPSTVMD 278
           QCQLC K GH  + C+ R          N     + +PN ++Q +    A   SPST+ D
Sbjct: 370 QCQLCGKFGHTVVRCYHRFDINFQGYNPNMDTVQTNKPNAKNQVQ----AMMASPSTISD 425

Query: 277 PSWYFDTGATDHVSPDIGKLSITEPYSGDDKLQVGN 170
            +W+FDTGAT H+S  I  LS  +PY G+DK+ VGN
Sbjct: 426 EAWFFDTGATHHLSQSIDPLSDVQPYMGNDKVIVGN 461


>emb|CDH30699.1| putative Ty1-copia-like retrotransposon [Cercis chinensis]
          Length = 646

 Score = 75.9 bits (185), Expect = 6e-12
 Identities = 38/88 (43%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
 Frame = -1

Query: 430 QCQLCNKPGHEAINCWQRA-NQTDYPSRRPNPRDQSRQANIANYGSPSTVMDPSWYFDTG 254
           QCQ+C K GH A  CW R  NQ    +   N    S Q   A   +P  + +  W+ DTG
Sbjct: 313 QCQICCKIGHVATECWHRFDNQFQPKASHSNQFSSSAQDPQALMAAPGLLGETPWFLDTG 372

Query: 253 ATDHVSPDIGKLSITEPYSGDDKLQVGN 170
           AT HV+ D+  LS+  P+SGDDK+ VGN
Sbjct: 373 ATHHVTSDLANLSLHNPFSGDDKVIVGN 400


>emb|CAN79381.1| hypothetical protein VITISV_010747 [Vitis vinifera]
          Length = 185

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 38/93 (40%), Positives = 54/93 (58%), Gaps = 8/93 (8%)
 Frame = -1

Query: 424 QLCNKPGHEAINCWQRANQTDYPSRRPNPRDQSRQANIANYG--------SPSTVMDPSW 269
           QLC K GH  ++C+ R    D   +  NP+  S Q N +N+         SPST+   +W
Sbjct: 66  QLCEKFGHTVVSCYHRF---DINFQGYNPKSDSTQVNKSNHNNQMQAMLASPSTINYEAW 122

Query: 268 YFDTGATDHVSPDIGKLSITEPYSGDDKLQVGN 170
           +FDTGAT H+S D+  LS  +PY G++K+ VGN
Sbjct: 123 FFDTGATHHLSQDVDPLSDVQPYKGNEKVIVGN 155


>ref|XP_004240274.1| PREDICTED: uncharacterized protein LOC101246433 [Solanum
           lycopersicum]
          Length = 446

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 46/123 (37%), Positives = 59/123 (47%), Gaps = 3/123 (2%)
 Frame = -1

Query: 427 CQLCNKPGHEAINCWQRANQTDYPSRRPNPRDQSRQANIANYGSPSTVMDPSWYFDTGAT 248
           CQ+C K GH A NC+ R N    P+  P P     QAN++   S S  +DPSW  D+GAT
Sbjct: 274 CQICEKIGHVAKNCYNRYNYQYPPTNTPLP-----QANVST--SSSAFLDPSWCLDSGAT 326

Query: 247 DHVSPDIGKLSITEPYSGDDKLQVGNDSTGQTNPPRTR*KWPLP---PVSLHK*NLLYHG 77
           +HV  D+G LSI   YS +D L   N S+    P   +     P       H+ N L   
Sbjct: 327 NHVIADVGNLSIASNYSRNDSL--ANTSSPHMEPQNCKQASSSPKWCEAMSHEFNALIRN 384

Query: 76  SLW 68
             W
Sbjct: 385 DTW 387


>ref|XP_002449872.1| hypothetical protein SORBIDRAFT_05g024695 [Sorghum bicolor]
           gi|241935715|gb|EES08860.1| hypothetical protein
           SORBIDRAFT_05g024695 [Sorghum bicolor]
          Length = 438

 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 33/97 (34%), Positives = 55/97 (56%)
 Frame = -1

Query: 433 MQCQLCNKPGHEAINCWQRANQTDYPSRRPNPRDQSRQANIANYGSPSTVMDPSWYFDTG 254
           M CQ+C K GH A +C++R + +  P     P+  +  A  ++YG     +D +WY DTG
Sbjct: 286 MFCQICTKEGHSAFDCFKRHDASYTP-----PQKSASAATSSHYG-----VDSNWYMDTG 335

Query: 253 ATDHVSPDIGKLSITEPYSGDDKLQVGNDSTGQTNPP 143
            TDH++ ++ KL++ + Y G D++   N S   + PP
Sbjct: 336 VTDHITSELDKLTVRDKYHGGDQVHTANGSAVTSEPP 372


>emb|CAN68496.1| hypothetical protein VITISV_010947 [Vitis vinifera]
          Length = 1539

 Score = 60.5 bits (145), Expect(2) = 5e-11
 Identities = 31/87 (35%), Positives = 45/87 (51%)
 Frame = -1

Query: 430 QCQLCNKPGHEAINCWQRANQTDYPSRRPNPRDQSRQANIANYGSPSTVMDPSWYFDTGA 251
           QCQLC K GH  + C+ R + T   +   +    S         +P+     SW+FDTGA
Sbjct: 553 QCQLCGKFGHTVVKCYHRFDITYQGTNGVSSSQDSSPLQAMLAATPNH--QDSWFFDTGA 610

Query: 250 TDHVSPDIGKLSITEPYSGDDKLQVGN 170
           T H+S     LS  +PYSG D++ +G+
Sbjct: 611 THHLSHSAQTLSHVQPYSGADQVTIGD 637



 Score = 32.3 bits (72), Expect(2) = 5e-11
 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
 Frame = -2

Query: 150 ILHGHVENGLYRLSPSTNKISSTMALSGVRTTLTG--WHQRLAHPHESILRR 1
           +L G + +GLY   PS++   + ++ S V     G  WH RL HP   IL +
Sbjct: 654 LLKGWLRDGLYEF-PSSSSTHAFVSTSSVPALTPGAIWHSRLGHPXXPILSK 704


>gb|AAT69582.1| putative polyprotein [Oryza sativa Japonica Group]
           gi|52353546|gb|AAU44112.1| putative polyprotein [Oryza
           sativa Japonica Group]
          Length = 1256

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 34/87 (39%), Positives = 49/87 (56%)
 Frame = -1

Query: 430 QCQLCNKPGHEAINCWQRANQTDYPSRRPNPRDQSRQANIANYGSPSTVMDPSWYFDTGA 251
           +CQLC K GH  I+CW R ++   P       D+      A+YG     +D +WY DTG 
Sbjct: 273 KCQLCYKRGHTVIDCWYRYDEDFVP-------DEKYAGTTASYG-----VDSNWYVDTGT 320

Query: 250 TDHVSPDIGKLSITEPYSGDDKLQVGN 170
           TDHV+ ++ KL+I + Y G D++Q  N
Sbjct: 321 TDHVTGELEKLTIRDKYKGQDQVQTAN 347


>gb|ABA94311.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 339

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 36/88 (40%), Positives = 49/88 (55%)
 Frame = -1

Query: 427 CQLCNKPGHEAINCWQRANQTDYPSRRPNPRDQSRQANIANYGSPSTVMDPSWYFDTGAT 248
           CQLC K GH  I CW R +QT  P  +      +  A  + YG     +D +WY D GAT
Sbjct: 249 CQLCGKTGHTVIKCWYRFDQTYQPEEKV-----AAAATNSAYG-----VDTNWYVDCGAT 298

Query: 247 DHVSPDIGKLSITEPYSGDDKLQVGNDS 164
           DH++ ++ KLSI E Y+G D++   N S
Sbjct: 299 DHITGELDKLSIREKYNGLDQVHATNGS 326


>gb|ACN32036.1| unknown [Zea mays]
          Length = 376

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 33/86 (38%), Positives = 48/86 (55%)
 Frame = -1

Query: 427 CQLCNKPGHEAINCWQRANQTDYPSRRPNPRDQSRQANIANYGSPSTVMDPSWYFDTGAT 248
           CQ+C K  H A+ CW R +Q              +QA  A +      +DP+WY D+GAT
Sbjct: 285 CQICGKGNHNALQCWHRFDQAY------QAESTVKQAAAATH---EYAVDPNWYMDSGAT 335

Query: 247 DHVSPDIGKLSITEPYSGDDKLQVGN 170
           DH++ D+ +L+  E Y+G DK+QV N
Sbjct: 336 DHITSDLERLTTRERYTGGDKIQVAN 361


>gb|ACL54615.1| unknown [Zea mays]
          Length = 376

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 33/86 (38%), Positives = 48/86 (55%)
 Frame = -1

Query: 427 CQLCNKPGHEAINCWQRANQTDYPSRRPNPRDQSRQANIANYGSPSTVMDPSWYFDTGAT 248
           CQ+C K  H A+ CW R +Q              +QA  A +      +DP+WY D+GAT
Sbjct: 285 CQICGKGNHNALQCWHRFDQAY------QAESTVKQAAAATH---EYAVDPNWYMDSGAT 335

Query: 247 DHVSPDIGKLSITEPYSGDDKLQVGN 170
           DH++ D+ +L+  E Y+G DK+QV N
Sbjct: 336 DHITSDLERLTTRERYTGGDKIQVAN 361


>emb|CAN62182.1| hypothetical protein VITISV_044400 [Vitis vinifera]
          Length = 920

 Score = 64.7 bits (156), Expect(2) = 2e-10
 Identities = 35/94 (37%), Positives = 53/94 (56%), Gaps = 7/94 (7%)
 Frame = -1

Query: 430 QCQLCNKPGHEAINCWQRAN-------QTDYPSRRPNPRDQSRQANIANYGSPSTVMDPS 272
           QCQLC K GH A  C+ R +        T  PS   N    +  A +A++ + S   D S
Sbjct: 138 QCQLCGKFGHTAQICYHRFDISFQGGXTTTSPSLN-NGNQNNILAMVASFSNSSA--DES 194

Query: 271 WYFDTGATDHVSPDIGKLSITEPYSGDDKLQVGN 170
           WY D+GA+ H++ ++G L+ T PY+G D++ +GN
Sbjct: 195 WYLDSGASHHLTQNLGNLTSTSPYTGTDRVTIGN 228



 Score = 26.2 bits (56), Expect(2) = 2e-10
 Identities = 16/60 (26%), Positives = 26/60 (43%), Gaps = 10/60 (16%)
 Frame = -2

Query: 150 ILHGHVENGLYRLSPSTNK-----ISSTMAL-----SGVRTTLTGWHQRLAHPHESILRR 1
           +  G +ENGLY+    +NK     +++  A      S +      WH RL H    I+ +
Sbjct: 261 LAQGKLENGLYKFPVFSNKKPYSSVNNASAFHSHFSSTIENKAELWHNRLGHVASDIVSK 320


>emb|CAN77126.1| hypothetical protein VITISV_013628 [Vitis vinifera]
          Length = 678

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 35/94 (37%), Positives = 53/94 (56%), Gaps = 7/94 (7%)
 Frame = -1

Query: 430 QCQLCNKPGHEAINCWQRAN---QTDYPSRRPNPRDQSRQANIANYGSPSTV----MDPS 272
           QCQ+C K GH A+NC+ RAN   Q  +P+ +P P+  +  A +    +  T+     D  
Sbjct: 242 QCQICGKFGHMALNCYHRANLNYQPQFPNSQPKPQPPNPIAAMLTTSTSPTMPFNNCDTP 301

Query: 271 WYFDTGATDHVSPDIGKLSITEPYSGDDKLQVGN 170
           WY D+GAT H +P+ G L+     +GD++  VGN
Sbjct: 302 WYMDSGATHHFTPEFGNLTDPCVLTGDEQAMVGN 335