BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00023936
         (473 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003602939.1| Pentatricopeptide repeat-containing protein ...   118   9e-25
ref|XP_004501623.1| PREDICTED: pentatricopeptide repeat-containi...   117   2e-24
gb|EOY33044.1| Pentatricopeptide repeat superfamily protein isof...   117   2e-24
ref|XP_004301354.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   115   8e-24
ref|XP_002283907.2| PREDICTED: pentatricopeptide repeat-containi...   113   3e-23
emb|CAN80524.1| hypothetical protein VITISV_030537 [Vitis vinifera]   113   3e-23
ref|XP_002532248.1| pentatricopeptide repeat-containing protein,...   112   4e-23
gb|EXC16677.1| hypothetical protein L484_007723 [Morus notabilis]     112   5e-23
ref|XP_004136259.1| PREDICTED: pentatricopeptide repeat-containi...   110   2e-22
ref|XP_002301082.1| hypothetical protein POPTR_0002s10380g [Popu...   109   3e-22
ref|XP_006472504.1| PREDICTED: pentatricopeptide repeat-containi...   108   7e-22
ref|XP_006433856.1| hypothetical protein CICLE_v10000867mg [Citr...   106   3e-21
ref|XP_006338085.1| PREDICTED: pentatricopeptide repeat-containi...   105   8e-21
ref|XP_004237977.1| PREDICTED: pentatricopeptide repeat-containi...   104   1e-20
ref|XP_003527867.1| PREDICTED: pentatricopeptide repeat-containi...   104   1e-20
gb|ESW09636.1| hypothetical protein PHAVU_009G143500g, partial [...   104   1e-20
ref|XP_002873896.1| pentatricopeptide repeat-containing protein ...   103   2e-20
ref|NP_974803.1| pentatricopeptide repeat-containing protein [Ar...   102   7e-20
ref|XP_006841227.1| hypothetical protein AMTR_s00135p00057260 [A...   101   9e-20
ref|XP_006403586.1| hypothetical protein EUTSA_v10010303mg [Eutr...    99   6e-19

>ref|XP_003602939.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355491987|gb|AES73190.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 586

 Score =  118 bits (295), Expect = 9e-25
 Identities = 54/79 (68%), Positives = 64/79 (81%)
 Frame = -1

Query: 239 DEKKKKRYITHEEAINLIKRQKDPQHALDIFNKVAEQKGFNHNNETYGTILYKFAKWRKF 60
           + +KK +YITH+ AINLIKR+KDPQHAL IFN V+EQKGFNHNN TY TIL K A+++KF
Sbjct: 123 ETRKKSKYITHDVAINLIKREKDPQHALKIFNMVSEQKGFNHNNATYATILQKLAQFKKF 182

Query: 59  NAVDGILRQMKYEPCKFQE 3
            AVD +L QM YE CKF E
Sbjct: 183 QAVDRVLHQMTYEACKFHE 201


>ref|XP_004501623.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g18475-like isoform X1 [Cicer arietinum]
           gi|502133024|ref|XP_004501624.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g18475-like isoform X2 [Cicer arietinum]
          Length = 510

 Score =  117 bits (293), Expect = 2e-24
 Identities = 52/85 (61%), Positives = 67/85 (78%)
 Frame = -1

Query: 257 VALKETDEKKKKRYITHEEAINLIKRQKDPQHALDIFNKVAEQKGFNHNNETYGTILYKF 78
           + L   + ++K +YITH+ AINLIKR+KDPQHAL IFN V+EQKGFNHNN TY +IL+K 
Sbjct: 41  ITLPSNETRRKNKYITHDVAINLIKREKDPQHALKIFNMVSEQKGFNHNNATYASILHKL 100

Query: 77  AKWRKFNAVDGILRQMKYEPCKFQE 3
           A+++KF AVD +L QM YE C+F E
Sbjct: 101 AQFKKFQAVDRVLHQMTYETCQFHE 125


>gb|EOY33044.1| Pentatricopeptide repeat superfamily protein isoform 1 [Theobroma
           cacao] gi|508785789|gb|EOY33045.1| Pentatricopeptide
           repeat superfamily protein isoform 1 [Theobroma cacao]
          Length = 530

 Score =  117 bits (292), Expect = 2e-24
 Identities = 51/80 (63%), Positives = 67/80 (83%)
 Frame = -1

Query: 242 TDEKKKKRYITHEEAINLIKRQKDPQHALDIFNKVAEQKGFNHNNETYGTILYKFAKWRK 63
           T+ ++K R+++HE AINLIKR++DPQ AL+IFN+V+EQKGF+HNN TYGTIL+K  + +K
Sbjct: 51  TESQRKPRFVSHETAINLIKRERDPQRALEIFNRVSEQKGFSHNNATYGTILHKLVQSKK 110

Query: 62  FNAVDGILRQMKYEPCKFQE 3
           F A+D ILRQM YE CKF E
Sbjct: 111 FQAIDSILRQMTYETCKFHE 130


>ref|XP_004301354.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g18475-like [Fragaria vesca subsp. vesca]
          Length = 568

 Score =  115 bits (287), Expect = 8e-24
 Identities = 51/80 (63%), Positives = 65/80 (81%)
 Frame = -1

Query: 242 TDEKKKKRYITHEEAINLIKRQKDPQHALDIFNKVAEQKGFNHNNETYGTILYKFAKWRK 63
           T+ ++K +YI+H  AINLIKR++DPQHAL+IFN V+EQKGFNHNN TY TIL K ++ +K
Sbjct: 103 TEARRKSKYISHNAAINLIKRERDPQHALEIFNMVSEQKGFNHNNATYATILNKLSQSKK 162

Query: 62  FNAVDGILRQMKYEPCKFQE 3
           F AVD +L QMKY+ CKF E
Sbjct: 163 FKAVDAVLYQMKYDTCKFHE 182


>ref|XP_002283907.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g18475-like [Vitis vinifera]
          Length = 513

 Score =  113 bits (282), Expect = 3e-23
 Identities = 50/79 (63%), Positives = 64/79 (81%)
 Frame = -1

Query: 239 DEKKKKRYITHEEAINLIKRQKDPQHALDIFNKVAEQKGFNHNNETYGTILYKFAKWRKF 60
           + +KK ++I+HE AINLIKR+ DPQ AL+IFN+VAEQ+GF+HNN TY TIL+K AK +KF
Sbjct: 50  EPRKKPKFISHESAINLIKRETDPQRALEIFNRVAEQRGFSHNNATYATILHKLAKSKKF 109

Query: 59  NAVDGILRQMKYEPCKFQE 3
            A+D +L QM YE CKF E
Sbjct: 110 QAIDAVLHQMTYETCKFHE 128


>emb|CAN80524.1| hypothetical protein VITISV_030537 [Vitis vinifera]
          Length = 714

 Score =  113 bits (282), Expect = 3e-23
 Identities = 50/79 (63%), Positives = 64/79 (81%)
 Frame = -1

Query: 239 DEKKKKRYITHEEAINLIKRQKDPQHALDIFNKVAEQKGFNHNNETYGTILYKFAKWRKF 60
           + +KK ++I+HE AINLIKR+ DPQ AL+IFN+VAEQ+GF+HNN TY TIL+K AK +KF
Sbjct: 120 EPRKKPKFISHESAINLIKRETDPQRALEIFNRVAEQRGFSHNNATYATILHKLAKSKKF 179

Query: 59  NAVDGILRQMKYEPCKFQE 3
            A+D +L QM YE CKF E
Sbjct: 180 QAIDAVLHQMTYETCKFHE 198


>ref|XP_002532248.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223528066|gb|EEF30142.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 521

 Score =  112 bits (281), Expect = 4e-23
 Identities = 54/87 (62%), Positives = 67/87 (77%)
 Frame = -1

Query: 263 TAVALKETDEKKKKRYITHEEAINLIKRQKDPQHALDIFNKVAEQKGFNHNNETYGTILY 84
           T+  L ET  K K  +I+HE AINLIKR+KDPQHAL+IFN V EQKGFNHN+ TY T+++
Sbjct: 43  TSSTLVETGRKCK--FISHESAINLIKREKDPQHALEIFNMVGEQKGFNHNHATYSTLIH 100

Query: 83  KFAKWRKFNAVDGILRQMKYEPCKFQE 3
           K A+ +KF+AVD +L QM YE CKF E
Sbjct: 101 KLAQTKKFHAVDALLHQMTYETCKFHE 127


>gb|EXC16677.1| hypothetical protein L484_007723 [Morus notabilis]
          Length = 513

 Score =  112 bits (280), Expect = 5e-23
 Identities = 50/77 (64%), Positives = 63/77 (81%)
 Frame = -1

Query: 233 KKKKRYITHEEAINLIKRQKDPQHALDIFNKVAEQKGFNHNNETYGTILYKFAKWRKFNA 54
           ++K +YI+H+ AINLIKR++DPQ AL+IFN V+EQKGFNHN +TY TIL+K A  +KF A
Sbjct: 55  RRKAKYISHDTAINLIKRERDPQRALEIFNSVSEQKGFNHNGDTYSTILHKLALSKKFGA 114

Query: 53  VDGILRQMKYEPCKFQE 3
           +D ILRQM YE CKF E
Sbjct: 115 IDAILRQMMYETCKFHE 131


>ref|XP_004136259.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g18475-like [Cucumis sativus]
           gi|449497032|ref|XP_004160294.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g18475-like [Cucumis sativus]
          Length = 504

 Score =  110 bits (274), Expect = 2e-22
 Identities = 48/82 (58%), Positives = 62/82 (75%)
 Frame = -1

Query: 248 KETDEKKKKRYITHEEAINLIKRQKDPQHALDIFNKVAEQKGFNHNNETYGTILYKFAKW 69
           KE  +K K  YI+HE AI LIK ++DPQHALDIFN V+EQ+GFNHN+ TY +I+   AK+
Sbjct: 37  KEIQKKSKSSYISHETAIKLIKNERDPQHALDIFNMVSEQQGFNHNHATYASIIQNLAKY 96

Query: 68  RKFNAVDGILRQMKYEPCKFQE 3
           +KF A+DG+L QM Y+ CK  E
Sbjct: 97  KKFQAIDGVLHQMTYDTCKVHE 118


>ref|XP_002301082.1| hypothetical protein POPTR_0002s10380g [Populus trichocarpa]
           gi|222842808|gb|EEE80355.1| hypothetical protein
           POPTR_0002s10380g [Populus trichocarpa]
          Length = 509

 Score =  109 bits (273), Expect = 3e-22
 Identities = 48/79 (60%), Positives = 63/79 (79%)
 Frame = -1

Query: 239 DEKKKKRYITHEEAINLIKRQKDPQHALDIFNKVAEQKGFNHNNETYGTILYKFAKWRKF 60
           + ++K ++I+HE A+NLIK ++DPQHAL+IFN V EQKGFNHN+ TY TI+ K A+ +KF
Sbjct: 40  EPRRKPKFISHETAVNLIKHERDPQHALEIFNLVVEQKGFNHNHATYSTIIDKLARAKKF 99

Query: 59  NAVDGILRQMKYEPCKFQE 3
            AVD +LRQM YE CKF E
Sbjct: 100 QAVDALLRQMMYETCKFHE 118


>ref|XP_006472504.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g18475-like isoform X1 [Citrus sinensis]
           gi|568836969|ref|XP_006472505.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g18475-like isoform X2 [Citrus sinensis]
          Length = 521

 Score =  108 bits (270), Expect = 7e-22
 Identities = 50/79 (63%), Positives = 63/79 (79%)
 Frame = -1

Query: 239 DEKKKKRYITHEEAINLIKRQKDPQHALDIFNKVAEQKGFNHNNETYGTILYKFAKWRKF 60
           D +K+ R+I+H  AI+LIK +K+PQ AL+IFN V+EQKGFNHNN TY TIL K A+++KF
Sbjct: 52  DARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKF 111

Query: 59  NAVDGILRQMKYEPCKFQE 3
            AVD +LRQM YE CKF E
Sbjct: 112 EAVDAVLRQMTYETCKFHE 130


>ref|XP_006433856.1| hypothetical protein CICLE_v10000867mg [Citrus clementina]
           gi|567882597|ref|XP_006433857.1| hypothetical protein
           CICLE_v10000867mg [Citrus clementina]
           gi|557535978|gb|ESR47096.1| hypothetical protein
           CICLE_v10000867mg [Citrus clementina]
           gi|557535979|gb|ESR47097.1| hypothetical protein
           CICLE_v10000867mg [Citrus clementina]
          Length = 521

 Score =  106 bits (265), Expect = 3e-21
 Identities = 48/79 (60%), Positives = 62/79 (78%)
 Frame = -1

Query: 239 DEKKKKRYITHEEAINLIKRQKDPQHALDIFNKVAEQKGFNHNNETYGTILYKFAKWRKF 60
           D +K+ ++I+H  AI+LIK +K+PQ AL+IFN V+EQKGFNHNN TY TIL K  +++KF
Sbjct: 52  DARKRSKFISHGAAISLIKCEKEPQRALEIFNTVSEQKGFNHNNGTYATILDKLVRYKKF 111

Query: 59  NAVDGILRQMKYEPCKFQE 3
            AVD +LRQM YE CKF E
Sbjct: 112 QAVDAVLRQMTYETCKFHE 130


>ref|XP_006338085.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g18475-like [Solanum tuberosum]
          Length = 511

 Score =  105 bits (261), Expect = 8e-21
 Identities = 44/76 (57%), Positives = 61/76 (80%)
 Frame = -1

Query: 230 KKKRYITHEEAINLIKRQKDPQHALDIFNKVAEQKGFNHNNETYGTILYKFAKWRKFNAV 51
           +K++YI+HE A+NLIK+++D + AL+IFNKV++QKGFNHNN TY  +L++ A  +KF  V
Sbjct: 53  RKRKYISHESAVNLIKQERDARRALEIFNKVSDQKGFNHNNSTYAVLLHRLAVCKKFETV 112

Query: 50  DGILRQMKYEPCKFQE 3
           D I+ QMKYE CKF E
Sbjct: 113 DAIIHQMKYETCKFHE 128


>ref|XP_004237977.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g18475-like [Solanum lycopersicum]
          Length = 511

 Score =  104 bits (260), Expect = 1e-20
 Identities = 44/76 (57%), Positives = 61/76 (80%)
 Frame = -1

Query: 230 KKKRYITHEEAINLIKRQKDPQHALDIFNKVAEQKGFNHNNETYGTILYKFAKWRKFNAV 51
           +K++YI+HE A+NLIK++KD + AL+IFNKV++QKGFNHNN TY  +L++ A  +KF  V
Sbjct: 53  RKRKYISHESAVNLIKQEKDARRALEIFNKVSDQKGFNHNNSTYAVLLHRLAVCKKFETV 112

Query: 50  DGILRQMKYEPCKFQE 3
           + I+ QMKYE CKF E
Sbjct: 113 EAIIHQMKYETCKFHE 128


>ref|XP_003527867.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g18475-like [Glycine max]
          Length = 546

 Score =  104 bits (260), Expect = 1e-20
 Identities = 47/76 (61%), Positives = 60/76 (78%)
 Frame = -1

Query: 230 KKKRYITHEEAINLIKRQKDPQHALDIFNKVAEQKGFNHNNETYGTILYKFAKWRKFNAV 51
           +K+++I+H+ AI+LIKR+KDPQHAL+IFN V+EQ GF HNN TY TIL K A+   F+AV
Sbjct: 86  RKRKHISHDSAIDLIKREKDPQHALNIFNMVSEQNGFQHNNATYATILDKLARCNNFHAV 145

Query: 50  DGILRQMKYEPCKFQE 3
           D +L QM YE CKF E
Sbjct: 146 DRVLHQMTYETCKFHE 161


>gb|ESW09636.1| hypothetical protein PHAVU_009G143500g, partial [Phaseolus
           vulgaris]
          Length = 742

 Score =  104 bits (259), Expect = 1e-20
 Identities = 48/76 (63%), Positives = 60/76 (78%)
 Frame = -1

Query: 230 KKKRYITHEEAINLIKRQKDPQHALDIFNKVAEQKGFNHNNETYGTILYKFAKWRKFNAV 51
           +K+++I+H+ AINLIKR+KDPQ AL IFN V++QKGF HNN TY TIL K A+  KF+AV
Sbjct: 57  RKRKFISHDGAINLIKREKDPQLALKIFNMVSQQKGFQHNNATYATILEKLARCNKFHAV 116

Query: 50  DGILRQMKYEPCKFQE 3
           D +L QM YE CKF E
Sbjct: 117 DRVLHQMTYETCKFHE 132


>ref|XP_002873896.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297319733|gb|EFH50155.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 507

 Score =  103 bits (257), Expect = 2e-20
 Identities = 47/87 (54%), Positives = 65/87 (74%)
 Frame = -1

Query: 263 TAVALKETDEKKKKRYITHEEAINLIKRQKDPQHALDIFNKVAEQKGFNHNNETYGTILY 84
           ++++  ET+ K K  +I+HE  ++L+KR++DPQ ALDIFNK ++QKGFNHNN TY  +L 
Sbjct: 41  SSISTMETNPKTK--FISHESTVSLMKRERDPQRALDIFNKASQQKGFNHNNATYSVLLD 98

Query: 83  KFAKWRKFNAVDGILRQMKYEPCKFQE 3
              + +KF AVD IL QMKYE C+FQE
Sbjct: 99  NLVRHKKFLAVDAILHQMKYETCRFQE 125


>ref|NP_974803.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|122214363|sp|Q3E9F0.1|PP392_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g18475 gi|110737103|dbj|BAF00503.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|332005185|gb|AED92568.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 506

 Score =  102 bits (253), Expect = 7e-20
 Identities = 44/84 (52%), Positives = 61/84 (72%)
 Frame = -1

Query: 254 ALKETDEKKKKRYITHEEAINLIKRQKDPQHALDIFNKVAEQKGFNHNNETYGTILYKFA 75
           ++   +   K ++I+HE A++L+KR++DPQ  LDIFNK ++QKGFNHNN TY  +L    
Sbjct: 41  SISPVETNPKTKFISHESAVSLMKRERDPQGVLDIFNKASQQKGFNHNNATYSVLLDNLV 100

Query: 74  KWRKFNAVDGILRQMKYEPCKFQE 3
           + +KF AVD IL QMKYE C+FQE
Sbjct: 101 RHKKFLAVDAILHQMKYETCRFQE 124


>ref|XP_006841227.1| hypothetical protein AMTR_s00135p00057260 [Amborella trichopoda]
           gi|548843143|gb|ERN02902.1| hypothetical protein
           AMTR_s00135p00057260 [Amborella trichopoda]
          Length = 514

 Score =  101 bits (252), Expect = 9e-20
 Identities = 46/76 (60%), Positives = 58/76 (76%)
 Frame = -1

Query: 230 KKKRYITHEEAINLIKRQKDPQHALDIFNKVAEQKGFNHNNETYGTILYKFAKWRKFNAV 51
           K  +++ HE AI LIK Q+DPQ ALDIFN+   Q+GF HN++TY TIL+  AK RKF+AV
Sbjct: 41  KPPKFVNHETAIELIKNQRDPQRALDIFNRAKAQRGFYHNHQTYSTILHVLAKARKFDAV 100

Query: 50  DGILRQMKYEPCKFQE 3
           +GILRQM  EPC+F E
Sbjct: 101 EGILRQMSLEPCRFYE 116


>ref|XP_006403586.1| hypothetical protein EUTSA_v10010303mg [Eutrema salsugineum]
           gi|557104705|gb|ESQ45039.1| hypothetical protein
           EUTSA_v10010303mg [Eutrema salsugineum]
          Length = 505

 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 43/84 (51%), Positives = 60/84 (71%)
 Frame = -1

Query: 254 ALKETDEKKKKRYITHEEAINLIKRQKDPQHALDIFNKVAEQKGFNHNNETYGTILYKFA 75
           ++   +   K ++I+HE A+NLIK ++DPQ ALD+FN ++ QKGFNHN+ TY  +L    
Sbjct: 40  SISHVETNPKTKFISHESAVNLIKCERDPQCALDVFNILSRQKGFNHNSATYSVLLDNLV 99

Query: 74  KWRKFNAVDGILRQMKYEPCKFQE 3
           + +KF AVD IL QMKYE C+FQE
Sbjct: 100 RHKKFQAVDAILNQMKYETCRFQE 123