BLASTX nr result
ID: Rheum21_contig00023818
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00023818
(293 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003631844.1| PREDICTED: uncharacterized protein LOC100853... 133 3e-29
ref|XP_004304332.1| PREDICTED: uncharacterized protein LOC101304... 117 2e-24
ref|XP_006481328.1| PREDICTED: nibrin-like [Citrus sinensis] 117 2e-24
ref|XP_006429739.1| hypothetical protein CICLE_v10012792mg [Citr... 117 2e-24
ref|XP_004232654.1| PREDICTED: nibrin-like isoform 2 [Solanum ly... 117 2e-24
ref|XP_004232653.1| PREDICTED: nibrin-like isoform 1 [Solanum ly... 117 2e-24
gb|EOY03071.1| Nijmegen breakage syndrome 1, putative isoform 4 ... 115 6e-24
gb|EOY03070.1| Nijmegen breakage syndrome 1, putative isoform 3 ... 115 6e-24
gb|EOY03069.1| Nijmegen breakage syndrome 1, putative isoform 2 ... 115 6e-24
gb|EOY03068.1| Nijmegen breakage syndrome 1, putative isoform 1 ... 115 6e-24
ref|XP_006363212.1| PREDICTED: nibrin-like [Solanum tuberosum] 114 1e-23
ref|XP_002525874.1| Nibrin, putative [Ricinus communis] gi|22353... 114 1e-23
gb|EMJ02895.1| hypothetical protein PRUPE_ppa004302mg [Prunus pe... 112 4e-23
ref|XP_003616106.1| Nibrin [Medicago truncatula] gi|355517441|gb... 112 4e-23
gb|EXB80304.1| hypothetical protein L484_025160 [Morus notabilis] 111 9e-23
ref|XP_004490746.1| PREDICTED: nibrin-like isoform X1 [Cicer ari... 109 3e-22
ref|XP_002322496.2| hypothetical protein POPTR_0015s12710g [Popu... 106 4e-21
ref|XP_003518356.1| PREDICTED: nibrin-like [Glycine max] 106 4e-21
ref|XP_003544952.1| PREDICTED: nibrin-like isoform X1 [Glycine m... 103 3e-20
ref|XP_004145862.1| PREDICTED: nibrin-like [Cucumis sativus] 99 6e-19
>ref|XP_003631844.1| PREDICTED: uncharacterized protein LOC100853048 [Vitis vinifera]
gi|296083807|emb|CBI24024.3| unnamed protein product
[Vitis vinifera]
Length = 595
Score = 133 bits (334), Expect = 3e-29
Identities = 61/96 (63%), Positives = 76/96 (79%)
Frame = -1
Query: 290 VRIRDCSKYGTFVTRVDGSKQKVHESPSKETSLKDGDLISFGTNNAAYRFCFVPFLLYVF 111
VRIRDCSKYGTF+ + GSK+K+HE P+KET+LKDGDL+SFGT NA YRF FVP + +V+
Sbjct: 71 VRIRDCSKYGTFINKDLGSKEKLHEFPNKETTLKDGDLVSFGTGNATYRFGFVPLIFFVY 130
Query: 110 HVEGSQGFHSVQDMVLSIGAIVTKKWTDECTHVIVD 3
E Q HS+QD + SIGA VT+ W+ ECTHV+VD
Sbjct: 131 RSEPFQMNHSLQDKISSIGASVTRAWSSECTHVLVD 166
>ref|XP_004304332.1| PREDICTED: uncharacterized protein LOC101304895 [Fragaria vesca
subsp. vesca]
Length = 518
Score = 117 bits (293), Expect = 2e-24
Identities = 54/97 (55%), Positives = 71/97 (73%)
Frame = -1
Query: 293 KVRIRDCSKYGTFVTRVDGSKQKVHESPSKETSLKDGDLISFGTNNAAYRFCFVPFLLYV 114
KVRIRDCSKYGT++ + S +K+H+ P+KETSL+DGDL+SFGT A +RF FVP L+
Sbjct: 70 KVRIRDCSKYGTYINKNLTSMEKIHDLPNKETSLRDGDLVSFGTGTAVFRFSFVPLNLFA 129
Query: 113 FHVEGSQGFHSVQDMVLSIGAIVTKKWTDECTHVIVD 3
E SQ H +Q+ + SIGA +T W+ ECTHV+VD
Sbjct: 130 CCPEKSQVNHPLQEKISSIGACITYHWSQECTHVLVD 166
>ref|XP_006481328.1| PREDICTED: nibrin-like [Citrus sinensis]
Length = 589
Score = 117 bits (292), Expect = 2e-24
Identities = 54/96 (56%), Positives = 72/96 (75%)
Frame = -1
Query: 293 KVRIRDCSKYGTFVTRVDGSKQKVHESPSKETSLKDGDLISFGTNNAAYRFCFVPFLLYV 114
+VRI+DCSKYGTF+ + GSK+KVHE P+KE +LKDGDL+SFGT NA YRFC+ P +L+
Sbjct: 71 RVRIKDCSKYGTFINKNLGSKEKVHEFPNKEATLKDGDLVSFGTGNATYRFCYAPLILF- 129
Query: 113 FHVEGSQGFHSVQDMVLSIGAIVTKKWTDECTHVIV 6
V+ Q +Q+ V SIGA +T K+ ECTH++V
Sbjct: 130 --VDSFQVNAPLQEKVSSIGAFITSKFCQECTHILV 163
>ref|XP_006429739.1| hypothetical protein CICLE_v10012792mg [Citrus clementina]
gi|557531796|gb|ESR42979.1| hypothetical protein
CICLE_v10012792mg [Citrus clementina]
Length = 206
Score = 117 bits (292), Expect = 2e-24
Identities = 54/96 (56%), Positives = 72/96 (75%)
Frame = -1
Query: 293 KVRIRDCSKYGTFVTRVDGSKQKVHESPSKETSLKDGDLISFGTNNAAYRFCFVPFLLYV 114
+VRI+DCSKYGTF+ + GSK+KVHE P+KE +LKDGDL+SFGT NA YRFC+ P +L+
Sbjct: 71 RVRIKDCSKYGTFINKNLGSKEKVHEFPNKEATLKDGDLVSFGTGNATYRFCYAPLILF- 129
Query: 113 FHVEGSQGFHSVQDMVLSIGAIVTKKWTDECTHVIV 6
V+ Q +Q+ V SIGA +T K+ ECTH++V
Sbjct: 130 --VDSFQVNAPLQEKVSSIGAFITSKFCQECTHILV 163
>ref|XP_004232654.1| PREDICTED: nibrin-like isoform 2 [Solanum lycopersicum]
Length = 554
Score = 117 bits (292), Expect = 2e-24
Identities = 54/97 (55%), Positives = 72/97 (74%)
Frame = -1
Query: 293 KVRIRDCSKYGTFVTRVDGSKQKVHESPSKETSLKDGDLISFGTNNAAYRFCFVPFLLYV 114
KVR+RDCSKYGTF+ + SK+KVHE P+KET LKDGDL+SFGT NA YRF +V F+ ++
Sbjct: 69 KVRVRDCSKYGTFLNKNLDSKEKVHEFPNKETMLKDGDLVSFGTGNATYRFSYVSFIFFI 128
Query: 113 FHVEGSQGFHSVQDMVLSIGAIVTKKWTDECTHVIVD 3
+ S+ + V SIGA +TKKW+ +C+HV+VD
Sbjct: 129 CSPKHSKTNQLITKKVSSIGASITKKWSLDCSHVLVD 165
>ref|XP_004232653.1| PREDICTED: nibrin-like isoform 1 [Solanum lycopersicum]
Length = 563
Score = 117 bits (292), Expect = 2e-24
Identities = 54/97 (55%), Positives = 72/97 (74%)
Frame = -1
Query: 293 KVRIRDCSKYGTFVTRVDGSKQKVHESPSKETSLKDGDLISFGTNNAAYRFCFVPFLLYV 114
KVR+RDCSKYGTF+ + SK+KVHE P+KET LKDGDL+SFGT NA YRF +V F+ ++
Sbjct: 69 KVRVRDCSKYGTFLNKNLDSKEKVHEFPNKETMLKDGDLVSFGTGNATYRFSYVSFIFFI 128
Query: 113 FHVEGSQGFHSVQDMVLSIGAIVTKKWTDECTHVIVD 3
+ S+ + V SIGA +TKKW+ +C+HV+VD
Sbjct: 129 CSPKHSKTNQLITKKVSSIGASITKKWSLDCSHVLVD 165
>gb|EOY03071.1| Nijmegen breakage syndrome 1, putative isoform 4 [Theobroma cacao]
Length = 526
Score = 115 bits (288), Expect = 6e-24
Identities = 55/97 (56%), Positives = 72/97 (74%)
Frame = -1
Query: 293 KVRIRDCSKYGTFVTRVDGSKQKVHESPSKETSLKDGDLISFGTNNAAYRFCFVPFLLYV 114
+VRI+D SKYGT V + SK+KVHE P+KETSL+DG+L+SFG NA YRFC+VP + Y+
Sbjct: 60 QVRIKDLSKYGTLVKKNLSSKKKVHEFPNKETSLEDGNLLSFGAGNATYRFCYVPLVFYI 119
Query: 113 FHVEGSQGFHSVQDMVLSIGAIVTKKWTDECTHVIVD 3
E SQ H +QD V SIGA +T ++ ECTHV++D
Sbjct: 120 CCAEVSQVNHHLQDKVSSIGARLTHAFSQECTHVLID 156
>gb|EOY03070.1| Nijmegen breakage syndrome 1, putative isoform 3 [Theobroma cacao]
Length = 520
Score = 115 bits (288), Expect = 6e-24
Identities = 55/97 (56%), Positives = 72/97 (74%)
Frame = -1
Query: 293 KVRIRDCSKYGTFVTRVDGSKQKVHESPSKETSLKDGDLISFGTNNAAYRFCFVPFLLYV 114
+VRI+D SKYGT V + SK+KVHE P+KETSL+DG+L+SFG NA YRFC+VP + Y+
Sbjct: 60 QVRIKDLSKYGTLVKKNLSSKKKVHEFPNKETSLEDGNLLSFGAGNATYRFCYVPLVFYI 119
Query: 113 FHVEGSQGFHSVQDMVLSIGAIVTKKWTDECTHVIVD 3
E SQ H +QD V SIGA +T ++ ECTHV++D
Sbjct: 120 CCAEVSQVNHHLQDKVSSIGARLTHAFSQECTHVLID 156
>gb|EOY03069.1| Nijmegen breakage syndrome 1, putative isoform 2 [Theobroma cacao]
Length = 510
Score = 115 bits (288), Expect = 6e-24
Identities = 55/97 (56%), Positives = 72/97 (74%)
Frame = -1
Query: 293 KVRIRDCSKYGTFVTRVDGSKQKVHESPSKETSLKDGDLISFGTNNAAYRFCFVPFLLYV 114
+VRI+D SKYGT V + SK+KVHE P+KETSL+DG+L+SFG NA YRFC+VP + Y+
Sbjct: 50 QVRIKDLSKYGTLVKKNLSSKKKVHEFPNKETSLEDGNLLSFGAGNATYRFCYVPLVFYI 109
Query: 113 FHVEGSQGFHSVQDMVLSIGAIVTKKWTDECTHVIVD 3
E SQ H +QD V SIGA +T ++ ECTHV++D
Sbjct: 110 CCAEVSQVNHHLQDKVSSIGARLTHAFSQECTHVLID 146
>gb|EOY03068.1| Nijmegen breakage syndrome 1, putative isoform 1 [Theobroma cacao]
Length = 524
Score = 115 bits (288), Expect = 6e-24
Identities = 55/97 (56%), Positives = 72/97 (74%)
Frame = -1
Query: 293 KVRIRDCSKYGTFVTRVDGSKQKVHESPSKETSLKDGDLISFGTNNAAYRFCFVPFLLYV 114
+VRI+D SKYGT V + SK+KVHE P+KETSL+DG+L+SFG NA YRFC+VP + Y+
Sbjct: 60 QVRIKDLSKYGTLVKKNLSSKKKVHEFPNKETSLEDGNLLSFGAGNATYRFCYVPLVFYI 119
Query: 113 FHVEGSQGFHSVQDMVLSIGAIVTKKWTDECTHVIVD 3
E SQ H +QD V SIGA +T ++ ECTHV++D
Sbjct: 120 CCAEVSQVNHHLQDKVSSIGARLTHAFSQECTHVLID 156
>ref|XP_006363212.1| PREDICTED: nibrin-like [Solanum tuberosum]
Length = 586
Score = 114 bits (286), Expect = 1e-23
Identities = 52/97 (53%), Positives = 72/97 (74%)
Frame = -1
Query: 293 KVRIRDCSKYGTFVTRVDGSKQKVHESPSKETSLKDGDLISFGTNNAAYRFCFVPFLLYV 114
KVR+RDCSKYGTF+ + SK+KVHE P++ET LKDGDL+SFGT NA YRF ++ F+ ++
Sbjct: 70 KVRVRDCSKYGTFLNKNLDSKEKVHEFPNRETMLKDGDLVSFGTGNATYRFSYLSFIFFI 129
Query: 113 FHVEGSQGFHSVQDMVLSIGAIVTKKWTDECTHVIVD 3
+ S+ + V SIGA +TKKW+ +C+HV+VD
Sbjct: 130 CSPKHSKTNQLITKKVSSIGASITKKWSLDCSHVLVD 166
>ref|XP_002525874.1| Nibrin, putative [Ricinus communis] gi|223534788|gb|EEF36478.1|
Nibrin, putative [Ricinus communis]
Length = 529
Score = 114 bits (285), Expect = 1e-23
Identities = 55/97 (56%), Positives = 71/97 (73%)
Frame = -1
Query: 293 KVRIRDCSKYGTFVTRVDGSKQKVHESPSKETSLKDGDLISFGTNNAAYRFCFVPFLLYV 114
+VRIRDCSKYGTF+ + SK+KVHE P+KET+LKDGD++SFGT NA Y F FVP + +V
Sbjct: 69 RVRIRDCSKYGTFINKNLDSKEKVHEFPNKETTLKDGDMVSFGTGNATYSFSFVPLIFFV 128
Query: 113 FHVEGSQGFHSVQDMVLSIGAIVTKKWTDECTHVIVD 3
Q +QD V SIGA +T + ++ECTHVI+D
Sbjct: 129 CCSGSFQVNDPLQDKVSSIGACITFQLSEECTHVIMD 165
>gb|EMJ02895.1| hypothetical protein PRUPE_ppa004302mg [Prunus persica]
Length = 517
Score = 112 bits (281), Expect = 4e-23
Identities = 52/97 (53%), Positives = 71/97 (73%)
Frame = -1
Query: 293 KVRIRDCSKYGTFVTRVDGSKQKVHESPSKETSLKDGDLISFGTNNAAYRFCFVPFLLYV 114
KVRIRDCSKYGTF+ + S +K+HE P+KETSL++GDL+SFGT NA YRF FVP + +
Sbjct: 69 KVRIRDCSKYGTFINKNLTSMEKIHELPNKETSLREGDLVSFGTGNAIYRFSFVPLIFFA 128
Query: 113 FHVEGSQGFHSVQDMVLSIGAIVTKKWTDECTHVIVD 3
+ +Q H+++D + S GA +T + ECTHV+VD
Sbjct: 129 CCSDPTQVNHALEDKLSSFGAHITYHLSQECTHVLVD 165
>ref|XP_003616106.1| Nibrin [Medicago truncatula] gi|355517441|gb|AES99064.1| Nibrin
[Medicago truncatula]
Length = 571
Score = 112 bits (281), Expect = 4e-23
Identities = 52/96 (54%), Positives = 74/96 (77%)
Frame = -1
Query: 290 VRIRDCSKYGTFVTRVDGSKQKVHESPSKETSLKDGDLISFGTNNAAYRFCFVPFLLYVF 111
V+IRDCSKYGTFV++ GSK+KVHE P+KET+L+DGDL+SFGT +A Y+FC VP +L++
Sbjct: 71 VQIRDCSKYGTFVSKNIGSKKKVHELPNKETALQDGDLVSFGTGSATYKFCHVPLILFI- 129
Query: 110 HVEGSQGFHSVQDMVLSIGAIVTKKWTDECTHVIVD 3
+Q S+++ + SIGA ++ +ECTHV+VD
Sbjct: 130 -CSSNQVDRSLEEKISSIGASISHTLNEECTHVLVD 164
>gb|EXB80304.1| hypothetical protein L484_025160 [Morus notabilis]
Length = 397
Score = 111 bits (278), Expect = 9e-23
Identities = 49/97 (50%), Positives = 74/97 (76%)
Frame = -1
Query: 293 KVRIRDCSKYGTFVTRVDGSKQKVHESPSKETSLKDGDLISFGTNNAAYRFCFVPFLLYV 114
K+RI+D SKYGTF+ + GS +KVHE P+KET+L DG+L+SFGT NA+Y+ F+P + +V
Sbjct: 42 KIRIKDLSKYGTFINKNLGSMEKVHEFPNKETTLADGNLLSFGTGNASYKLSFIPLVFWV 101
Query: 113 FHVEGSQGFHSVQDMVLSIGAIVTKKWTDECTHVIVD 3
+ +E +Q H +QD + SIGA +T ++ ECTHV+++
Sbjct: 102 YTLEPNQVNHPLQDKLSSIGAHITYNFSQECTHVLIE 138
>ref|XP_004490746.1| PREDICTED: nibrin-like isoform X1 [Cicer arietinum]
gi|502096470|ref|XP_004490747.1| PREDICTED: nibrin-like
isoform X2 [Cicer arietinum]
Length = 547
Score = 109 bits (273), Expect = 3e-22
Identities = 50/96 (52%), Positives = 71/96 (73%)
Frame = -1
Query: 290 VRIRDCSKYGTFVTRVDGSKQKVHESPSKETSLKDGDLISFGTNNAAYRFCFVPFLLYVF 111
++IRDCSKYGTFV++ G K+KVHE P+KET L+DGDL+SFGT +A Y+FC VP + ++
Sbjct: 63 IQIRDCSKYGTFVSKNVGPKKKVHELPNKETELQDGDLVSFGTGSATYKFCHVPLIFFI- 121
Query: 110 HVEGSQGFHSVQDMVLSIGAIVTKKWTDECTHVIVD 3
+Q S+++ + SIGA + T+ECTHV+VD
Sbjct: 122 -CPSNQVDRSLEEKISSIGASIAHTLTEECTHVLVD 156
>ref|XP_002322496.2| hypothetical protein POPTR_0015s12710g [Populus trichocarpa]
gi|550322593|gb|EEF06623.2| hypothetical protein
POPTR_0015s12710g [Populus trichocarpa]
Length = 517
Score = 106 bits (264), Expect = 4e-21
Identities = 51/97 (52%), Positives = 69/97 (71%)
Frame = -1
Query: 293 KVRIRDCSKYGTFVTRVDGSKQKVHESPSKETSLKDGDLISFGTNNAAYRFCFVPFLLYV 114
+V IRDCSKYGT++ +K+KVH+ +KETSLKDGD++SFGT A YRFCFVP + +V
Sbjct: 70 RVLIRDCSKYGTYI-----NKEKVHKFLNKETSLKDGDVVSFGTGTAVYRFCFVPLVFFV 124
Query: 113 FHVEGSQGFHSVQDMVLSIGAIVTKKWTDECTHVIVD 3
+ E Q ++D V SIGA +T ++ECTHV+ D
Sbjct: 125 YCSESFQVDQLLRDKVSSIGACITYNLSEECTHVLAD 161
>ref|XP_003518356.1| PREDICTED: nibrin-like [Glycine max]
Length = 526
Score = 106 bits (264), Expect = 4e-21
Identities = 47/96 (48%), Positives = 71/96 (73%)
Frame = -1
Query: 290 VRIRDCSKYGTFVTRVDGSKQKVHESPSKETSLKDGDLISFGTNNAAYRFCFVPFLLYVF 111
+ IRDCSKYGTF+++ DG+K+KVHE P+K+T+L+DGDL+SFGT A Y+FC VP + ++
Sbjct: 45 IHIRDCSKYGTFISKNDGAKKKVHELPNKDTALEDGDLVSFGTGTATYKFCHVPLVFFI- 103
Query: 110 HVEGSQGFHSVQDMVLSIGAIVTKKWTDECTHVIVD 3
++ S+++ + SIGA +T + CTHV+VD
Sbjct: 104 -CSSNKVDRSLEEKISSIGAGITHTLGEGCTHVLVD 138
>ref|XP_003544952.1| PREDICTED: nibrin-like isoform X1 [Glycine max]
gi|571511887|ref|XP_006596489.1| PREDICTED: nibrin-like
isoform X2 [Glycine max]
gi|571511894|ref|XP_006596490.1| PREDICTED: nibrin-like
isoform X3 [Glycine max]
Length = 555
Score = 103 bits (256), Expect = 3e-20
Identities = 46/96 (47%), Positives = 69/96 (71%)
Frame = -1
Query: 290 VRIRDCSKYGTFVTRVDGSKQKVHESPSKETSLKDGDLISFGTNNAAYRFCFVPFLLYVF 111
+ IRDCSKYGTF+ + G+K+KVHE P+KET+L++GDL+SFGT A Y+FC VP + ++
Sbjct: 71 IHIRDCSKYGTFINKNGGAKKKVHELPNKETALENGDLVSFGTGTATYKFCHVPLVFFI- 129
Query: 110 HVEGSQGFHSVQDMVLSIGAIVTKKWTDECTHVIVD 3
++ S+++ + SIGA +T + CTHV+VD
Sbjct: 130 -CSSNKVDQSLEEKISSIGASITHTLGEGCTHVLVD 164
>ref|XP_004145862.1| PREDICTED: nibrin-like [Cucumis sativus]
Length = 523
Score = 99.0 bits (245), Expect = 6e-19
Identities = 54/97 (55%), Positives = 63/97 (64%)
Frame = -1
Query: 293 KVRIRDCSKYGTFVTRVDGSKQKVHESPSKETSLKDGDLISFGTNNAAYRFCFVPFLLYV 114
KVRI DCSKYGTFV R G K+K+HE P KE SL DGD++SFG+ NA YRF V L YV
Sbjct: 70 KVRISDCSKYGTFVRRNSGLKEKLHELPRKEASLYDGDVVSFGSGNATYRFSLVQLLFYV 129
Query: 113 FHVEGSQGFHSVQDMVLSIGAIVTKKWTDECTHVIVD 3
E Q ++D V SIGA T ECTHV+V+
Sbjct: 130 NRSESFQS-QLLRDKVSSIGA-CTSHDIQECTHVLVE 164