BLASTX nr result
ID: Rheum21_contig00023760
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Rheum21_contig00023760 (919 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ADL36768.1| MYB domain class transcription factor [Malus dome... 60 9e-07 ref|XP_002276091.1| PREDICTED: uncharacterized protein LOC100240... 60 9e-07 emb|CAN62191.1| hypothetical protein VITISV_020114 [Vitis vinifera] 60 9e-07 ref|XP_002319449.1| hypothetical protein POPTR_0013s00290g [Popu... 57 7e-06 >gb|ADL36768.1| MYB domain class transcription factor [Malus domestica] Length = 414 Score = 60.5 bits (145), Expect = 9e-07 Identities = 40/107 (37%), Positives = 52/107 (48%), Gaps = 16/107 (14%) Frame = -2 Query: 531 GCYDQSFSWGWRPSGKEAQIHVQDEINKWSSQFHHTPLLPGSSIPNQCPQESAYDEIKPE 352 G +D S ++ W P EA E KWS H+T L G+ +Q Q + Y EIKPE Sbjct: 311 GYFDSSAAFSWWPP--EAVKSDDPEEIKWSEYLHNTSFLMGT---HQASQPATYSEIKPE 365 Query: 351 ISPYVTSEP--STTWHHQTQQQ--------------DLQRLAEAFGQ 259 ++ S +T+WHHQ QQ DLQRLA +FGQ Sbjct: 366 SQSHILSNSLSATSWHHQNHQQQQQQALQASEMYTKDLQRLAVSFGQ 412 >ref|XP_002276091.1| PREDICTED: uncharacterized protein LOC100240910 [Vitis vinifera] Length = 439 Score = 60.5 bits (145), Expect = 9e-07 Identities = 46/117 (39%), Positives = 62/117 (52%), Gaps = 18/117 (15%) Frame = -2 Query: 552 IDVQTSQGCYDQSF-SWGWRPSGK---EAQIHVQD---EINKWSSQFHHTPLLPGSSIPN 394 I++Q++ ++ +F S G GK E QIH+ + E KWS ++ HTP L G+++ N Sbjct: 325 IELQSNSAFFENNFFSLGLADCGKSDKENQIHMLEGDPEDIKWS-EYLHTPFLLGTTLQN 383 Query: 393 QCPQESAYDEIKPEISPYVTSEPSTTWHHQTQQQ-----------DLQRLAEAFGQI 256 Q PQ Y E KP I + T ST WH Q+Q DLQRL AFGQI Sbjct: 384 QSPQP-IYSETKPGIH-FTTDGSSTGWHQNQQEQPIQASADIYTKDLQRLGVAFGQI 438 >emb|CAN62191.1| hypothetical protein VITISV_020114 [Vitis vinifera] Length = 439 Score = 60.5 bits (145), Expect = 9e-07 Identities = 46/117 (39%), Positives = 62/117 (52%), Gaps = 18/117 (15%) Frame = -2 Query: 552 IDVQTSQGCYDQSF-SWGWRPSGK---EAQIHVQD---EINKWSSQFHHTPLLPGSSIPN 394 I++Q++ ++ +F S G GK E QIH+ + E KWS ++ HTP L G+++ N Sbjct: 325 IELQSNSAFFENNFFSLGLADCGKSDKENQIHMLEGDPEDIKWS-EYLHTPFLLGTTLQN 383 Query: 393 QCPQESAYDEIKPEISPYVTSEPSTTWHHQTQQQ-----------DLQRLAEAFGQI 256 Q PQ Y E KP I + T ST WH Q+Q DLQRL AFGQI Sbjct: 384 QSPQP-IYSETKPGIH-FTTDGSSTGWHQNQQEQPIQASADIYTKDLQRLGVAFGQI 438 >ref|XP_002319449.1| hypothetical protein POPTR_0013s00290g [Populus trichocarpa] gi|222857825|gb|EEE95372.1| hypothetical protein POPTR_0013s00290g [Populus trichocarpa] Length = 446 Score = 57.4 bits (137), Expect = 7e-06 Identities = 43/116 (37%), Positives = 62/116 (53%), Gaps = 18/116 (15%) Frame = -2 Query: 552 IDVQTSQGCYDQS-FSWGWRPSGKEA-QIHVQDEIN------KWSSQFHHTPLLPGSSIP 397 I++Q++ ++ S FSWG GK + + H++ N KWS ++ TP GS+I Sbjct: 332 IELQSNTNFFESSAFSWGLADCGKSSDEAHLRSLANETVEDIKWS-EYLSTPFFLGSTIQ 390 Query: 396 NQCPQESAYDEIKPEISPYVTSEPSTTW----HHQTQQ------QDLQRLAEAFGQ 259 NQ Q Y E+KPE + ++ ST+W H Q Q +DLQRLA AFGQ Sbjct: 391 NQTSQH-VYSEVKPE-THFIAQGSSTSWLKNQHQQASQPADIYTKDLQRLAVAFGQ 444