BLASTX nr result

ID: Rheum21_contig00023760 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00023760
         (919 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADL36768.1| MYB domain class transcription factor [Malus dome...    60   9e-07
ref|XP_002276091.1| PREDICTED: uncharacterized protein LOC100240...    60   9e-07
emb|CAN62191.1| hypothetical protein VITISV_020114 [Vitis vinifera]    60   9e-07
ref|XP_002319449.1| hypothetical protein POPTR_0013s00290g [Popu...    57   7e-06

>gb|ADL36768.1| MYB domain class transcription factor [Malus domestica]
          Length = 414

 Score = 60.5 bits (145), Expect = 9e-07
 Identities = 40/107 (37%), Positives = 52/107 (48%), Gaps = 16/107 (14%)
 Frame = -2

Query: 531 GCYDQSFSWGWRPSGKEAQIHVQDEINKWSSQFHHTPLLPGSSIPNQCPQESAYDEIKPE 352
           G +D S ++ W P   EA      E  KWS   H+T  L G+   +Q  Q + Y EIKPE
Sbjct: 311 GYFDSSAAFSWWPP--EAVKSDDPEEIKWSEYLHNTSFLMGT---HQASQPATYSEIKPE 365

Query: 351 ISPYVTSEP--STTWHHQTQQQ--------------DLQRLAEAFGQ 259
              ++ S    +T+WHHQ  QQ              DLQRLA +FGQ
Sbjct: 366 SQSHILSNSLSATSWHHQNHQQQQQQALQASEMYTKDLQRLAVSFGQ 412


>ref|XP_002276091.1| PREDICTED: uncharacterized protein LOC100240910 [Vitis vinifera]
          Length = 439

 Score = 60.5 bits (145), Expect = 9e-07
 Identities = 46/117 (39%), Positives = 62/117 (52%), Gaps = 18/117 (15%)
 Frame = -2

Query: 552 IDVQTSQGCYDQSF-SWGWRPSGK---EAQIHVQD---EINKWSSQFHHTPLLPGSSIPN 394
           I++Q++   ++ +F S G    GK   E QIH+ +   E  KWS ++ HTP L G+++ N
Sbjct: 325 IELQSNSAFFENNFFSLGLADCGKSDKENQIHMLEGDPEDIKWS-EYLHTPFLLGTTLQN 383

Query: 393 QCPQESAYDEIKPEISPYVTSEPSTTWHHQTQQQ-----------DLQRLAEAFGQI 256
           Q PQ   Y E KP I  + T   ST WH   Q+Q           DLQRL  AFGQI
Sbjct: 384 QSPQP-IYSETKPGIH-FTTDGSSTGWHQNQQEQPIQASADIYTKDLQRLGVAFGQI 438


>emb|CAN62191.1| hypothetical protein VITISV_020114 [Vitis vinifera]
          Length = 439

 Score = 60.5 bits (145), Expect = 9e-07
 Identities = 46/117 (39%), Positives = 62/117 (52%), Gaps = 18/117 (15%)
 Frame = -2

Query: 552 IDVQTSQGCYDQSF-SWGWRPSGK---EAQIHVQD---EINKWSSQFHHTPLLPGSSIPN 394
           I++Q++   ++ +F S G    GK   E QIH+ +   E  KWS ++ HTP L G+++ N
Sbjct: 325 IELQSNSAFFENNFFSLGLADCGKSDKENQIHMLEGDPEDIKWS-EYLHTPFLLGTTLQN 383

Query: 393 QCPQESAYDEIKPEISPYVTSEPSTTWHHQTQQQ-----------DLQRLAEAFGQI 256
           Q PQ   Y E KP I  + T   ST WH   Q+Q           DLQRL  AFGQI
Sbjct: 384 QSPQP-IYSETKPGIH-FTTDGSSTGWHQNQQEQPIQASADIYTKDLQRLGVAFGQI 438


>ref|XP_002319449.1| hypothetical protein POPTR_0013s00290g [Populus trichocarpa]
           gi|222857825|gb|EEE95372.1| hypothetical protein
           POPTR_0013s00290g [Populus trichocarpa]
          Length = 446

 Score = 57.4 bits (137), Expect = 7e-06
 Identities = 43/116 (37%), Positives = 62/116 (53%), Gaps = 18/116 (15%)
 Frame = -2

Query: 552 IDVQTSQGCYDQS-FSWGWRPSGKEA-QIHVQDEIN------KWSSQFHHTPLLPGSSIP 397
           I++Q++   ++ S FSWG    GK + + H++   N      KWS ++  TP   GS+I 
Sbjct: 332 IELQSNTNFFESSAFSWGLADCGKSSDEAHLRSLANETVEDIKWS-EYLSTPFFLGSTIQ 390

Query: 396 NQCPQESAYDEIKPEISPYVTSEPSTTW----HHQTQQ------QDLQRLAEAFGQ 259
           NQ  Q   Y E+KPE + ++    ST+W    H Q  Q      +DLQRLA AFGQ
Sbjct: 391 NQTSQH-VYSEVKPE-THFIAQGSSTSWLKNQHQQASQPADIYTKDLQRLAVAFGQ 444


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