BLASTX nr result
ID: Rheum21_contig00023498
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00023498
(263 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006347515.1| PREDICTED: uncharacterized protein LOC102588... 64 2e-08
gb|EOY23703.1| Plastid transcriptionally active 15 [Theobroma ca... 62 6e-08
ref|XP_004235022.1| PREDICTED: uncharacterized protein LOC101249... 62 6e-08
ref|XP_002515871.1| conserved hypothetical protein [Ricinus comm... 58 2e-06
ref|XP_006280352.1| hypothetical protein CARUB_v10026279mg [Caps... 56 6e-06
ref|XP_006280351.1| hypothetical protein CARUB_v10026279mg [Caps... 56 6e-06
ref|XP_002321365.1| mitochondrial transcription termination fact... 56 6e-06
ref|XP_003634173.1| PREDICTED: uncharacterized protein LOC100853... 55 7e-06
emb|CBI23085.3| unnamed protein product [Vitis vinifera] 55 7e-06
ref|NP_200229.1| plastid transcriptionally active protein 15 [Ar... 55 1e-05
gb|AAM65747.1| unknown [Arabidopsis thaliana] 55 1e-05
>ref|XP_006347515.1| PREDICTED: uncharacterized protein LOC102588461 [Solanum tuberosum]
Length = 518
Score = 63.9 bits (154), Expect = 2e-08
Identities = 33/70 (47%), Positives = 50/70 (71%), Gaps = 1/70 (1%)
Frame = +2
Query: 53 LVYCNGDS-NSAQSTLGVDCFGAVFLLFRELGISEEDTQLLLENNPSLKTSSFESIRSRI 229
L+ CN + N++ + VD +F LFRE+G +E DT+ LL+ +P++ + FESIR+RI
Sbjct: 63 LLKCNALAINNSSTNSFVDSGVMLFSLFREIGFNETDTEALLDAHPAINLTPFESIRTRI 122
Query: 230 HSLQSLGLNG 259
HSLQSLG++G
Sbjct: 123 HSLQSLGVSG 132
>gb|EOY23703.1| Plastid transcriptionally active 15 [Theobroma cacao]
Length = 515
Score = 62.4 bits (150), Expect = 6e-08
Identities = 26/50 (52%), Positives = 42/50 (84%)
Frame = +2
Query: 113 GAVFLLFRELGISEEDTQLLLENNPSLKTSSFESIRSRIHSLQSLGLNGF 262
G +F LFRE+G++E +T LLL+ NP+L+++S + IR+R+ +LQS+G+NGF
Sbjct: 93 GMLFSLFREIGLNENETDLLLDKNPTLRSTSLDKIRARLLALQSVGINGF 142
>ref|XP_004235022.1| PREDICTED: uncharacterized protein LOC101249713 [Solanum
lycopersicum]
Length = 514
Score = 62.4 bits (150), Expect = 6e-08
Identities = 33/70 (47%), Positives = 48/70 (68%), Gaps = 1/70 (1%)
Frame = +2
Query: 53 LVYCNGDS-NSAQSTLGVDCFGAVFLLFRELGISEEDTQLLLENNPSLKTSSFESIRSRI 229
L+ CN + N + + VD +F LFRE+G +E DT+ LL+ +P + + FESIR+RI
Sbjct: 59 LLKCNALAINDSSTNSFVDSGVMLFSLFREIGFNETDTEALLDAHPVISLTPFESIRTRI 118
Query: 230 HSLQSLGLNG 259
HSLQSLG++G
Sbjct: 119 HSLQSLGVSG 128
>ref|XP_002515871.1| conserved hypothetical protein [Ricinus communis]
gi|223545026|gb|EEF46540.1| conserved hypothetical
protein [Ricinus communis]
Length = 454
Score = 57.8 bits (138), Expect = 2e-06
Identities = 27/67 (40%), Positives = 46/67 (68%), Gaps = 5/67 (7%)
Frame = +2
Query: 74 SNSAQSTLGVDCF-----GAVFLLFRELGISEEDTQLLLENNPSLKTSSFESIRSRIHSL 238
S ++ + +G + F G ++ FRE G++E++T+ +LE NPSL ++F+SIRSR+ L
Sbjct: 12 STTSSNAVGYNMFVLCVPGFLYSFFREFGLNEKETEFILEQNPSLTLTAFDSIRSRVFLL 71
Query: 239 QSLGLNG 259
+S+GL G
Sbjct: 72 ESVGLKG 78
>ref|XP_006280352.1| hypothetical protein CARUB_v10026279mg [Capsella rubella]
gi|482549056|gb|EOA13250.1| hypothetical protein
CARUB_v10026279mg [Capsella rubella]
Length = 498
Score = 55.8 bits (133), Expect = 6e-06
Identities = 23/49 (46%), Positives = 39/49 (79%)
Frame = +2
Query: 116 AVFLLFRELGISEEDTQLLLENNPSLKTSSFESIRSRIHSLQSLGLNGF 262
++F LFR++G SEE+T+++L NP +K++ ++I +R+ SLQSL +NGF
Sbjct: 78 SLFSLFRDIGFSEEETEMILAKNPDIKSAPLDTIGARVASLQSLKINGF 126
>ref|XP_006280351.1| hypothetical protein CARUB_v10026279mg [Capsella rubella]
gi|482549055|gb|EOA13249.1| hypothetical protein
CARUB_v10026279mg [Capsella rubella]
Length = 469
Score = 55.8 bits (133), Expect = 6e-06
Identities = 23/49 (46%), Positives = 39/49 (79%)
Frame = +2
Query: 116 AVFLLFRELGISEEDTQLLLENNPSLKTSSFESIRSRIHSLQSLGLNGF 262
++F LFR++G SEE+T+++L NP +K++ ++I +R+ SLQSL +NGF
Sbjct: 78 SLFSLFRDIGFSEEETEMILAKNPDIKSAPLDTIGARVASLQSLKINGF 126
>ref|XP_002321365.1| mitochondrial transcription termination factor-related family
protein [Populus trichocarpa]
gi|222868361|gb|EEF05492.1| mitochondrial transcription
termination factor-related family protein [Populus
trichocarpa]
Length = 517
Score = 55.8 bits (133), Expect = 6e-06
Identities = 24/50 (48%), Positives = 38/50 (76%)
Frame = +2
Query: 110 FGAVFLLFRELGISEEDTQLLLENNPSLKTSSFESIRSRIHSLQSLGLNG 259
FG ++ F E+G +E++T LLLE NP+LK++SF+SIR + L+S+G+ G
Sbjct: 84 FGLIYSFFAEMGFNEKETGLLLEQNPALKSASFDSIRVHVLLLESVGIKG 133
>ref|XP_003634173.1| PREDICTED: uncharacterized protein LOC100853133 [Vitis vinifera]
Length = 985
Score = 55.5 bits (132), Expect = 7e-06
Identities = 23/49 (46%), Positives = 37/49 (75%)
Frame = +2
Query: 113 GAVFLLFRELGISEEDTQLLLENNPSLKTSSFESIRSRIHSLQSLGLNG 259
G++F LF+ LG+ E + +LLL NP+L+ +SF+ + R+ SL+SLG+NG
Sbjct: 555 GSLFSLFQGLGVDEREVELLLNKNPALRLASFDCVHERVCSLESLGING 603
>emb|CBI23085.3| unnamed protein product [Vitis vinifera]
Length = 1884
Score = 55.5 bits (132), Expect = 7e-06
Identities = 23/49 (46%), Positives = 37/49 (75%)
Frame = +2
Query: 113 GAVFLLFRELGISEEDTQLLLENNPSLKTSSFESIRSRIHSLQSLGLNG 259
G++F LF+ LG+ E + +LLL NP+L+ +SF+ + R+ SL+SLG+NG
Sbjct: 88 GSLFSLFQGLGVDEREVELLLNKNPALRLASFDCVHERVCSLESLGING 136
>ref|NP_200229.1| plastid transcriptionally active protein 15 [Arabidopsis thaliana]
gi|10178167|dbj|BAB11580.1| unnamed protein product
[Arabidopsis thaliana] gi|19698993|gb|AAL91232.1|
unknown protein [Arabidopsis thaliana]
gi|23198092|gb|AAN15573.1| unknown protein [Arabidopsis
thaliana] gi|332009080|gb|AED96463.1| transcriptionally
active protein 15 [Arabidopsis thaliana]
Length = 500
Score = 55.1 bits (131), Expect = 1e-05
Identities = 23/49 (46%), Positives = 38/49 (77%)
Frame = +2
Query: 116 AVFLLFRELGISEEDTQLLLENNPSLKTSSFESIRSRIHSLQSLGLNGF 262
++F LFR++G EE+T+++L NP +K++S + I +R+ SLQSL +NGF
Sbjct: 80 SLFSLFRDIGFIEEETEMILAKNPDIKSTSLDKIGARVASLQSLKINGF 128
>gb|AAM65747.1| unknown [Arabidopsis thaliana]
Length = 500
Score = 55.1 bits (131), Expect = 1e-05
Identities = 23/49 (46%), Positives = 38/49 (77%)
Frame = +2
Query: 116 AVFLLFRELGISEEDTQLLLENNPSLKTSSFESIRSRIHSLQSLGLNGF 262
++F LFR++G EE+T+++L NP +K++S + I +R+ SLQSL +NGF
Sbjct: 80 SLFSLFRDIGFIEEETEMILAKNPDIKSTSLDKIGARVASLQSLKINGF 128