BLASTX nr result

ID: Rheum21_contig00023316 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00023316
         (670 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308454.1| hypothetical protein POPTR_0006s22410g [Popu...    63   9e-08
ref|XP_002530516.1| conserved hypothetical protein [Ricinus comm...    58   3e-06
ref|XP_002884853.1| hypothetical protein ARALYDRAFT_897362 [Arab...    57   7e-06

>ref|XP_002308454.1| hypothetical protein POPTR_0006s22410g [Populus trichocarpa]
           gi|222854430|gb|EEE91977.1| hypothetical protein
           POPTR_0006s22410g [Populus trichocarpa]
          Length = 61

 Score = 62.8 bits (151), Expect = 9e-08
 Identities = 33/60 (55%), Positives = 41/60 (68%), Gaps = 9/60 (15%)
 Frame = -2

Query: 450 MLWAYPGTRRQLVSV---------LISFGAQLSLANIAPQQARTKAGSDCVRQQLRKWLD 298
           M+WAYP TR+QL +          L  +GA +SLANIAPQQARTKA SD ++ +LRK LD
Sbjct: 1   MIWAYPPTRKQLAATVGLFLTGASLSVYGAYMSLANIAPQQARTKARSDYIKDRLRKMLD 60


>ref|XP_002530516.1| conserved hypothetical protein [Ricinus communis]
           gi|223529920|gb|EEF31848.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 82

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 29/60 (48%), Positives = 40/60 (66%), Gaps = 9/60 (15%)
 Frame = -2

Query: 450 MLWAYPGTRRQLV---------SVLISFGAQLSLANIAPQQARTKAGSDCVRQQLRKWLD 298
           +LW+YP T+ QL+         + LI++GA LSL N+APQQAR KA  D ++ +LRK LD
Sbjct: 22  VLWSYPPTKNQLLVTVGLAIAGASLIAYGAHLSLVNVAPQQARAKARKDYIKDRLRKMLD 81


>ref|XP_002884853.1| hypothetical protein ARALYDRAFT_897362 [Arabidopsis lyrata subsp.
           lyrata] gi|297330693|gb|EFH61112.1| hypothetical protein
           ARALYDRAFT_897362 [Arabidopsis lyrata subsp. lyrata]
          Length = 63

 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 34/57 (59%), Positives = 39/57 (68%), Gaps = 9/57 (15%)
 Frame = -2

Query: 441 AYPGTRRQL-VSV--------LISFGAQLSLANIAPQQARTKAGSDCVRQQLRKWLD 298
           +YP TRRQL VSV        L   GA LSLANIAPQQAR KA +D V+ ++RKWLD
Sbjct: 6   SYPPTRRQLTVSVGFFAAGVSLFVAGAYLSLANIAPQQARVKARNDFVKDRIRKWLD 62


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