BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00022853
         (681 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004134242.1| PREDICTED: DNA-directed RNA polymerase II su...   242   9e-62
gb|ESW10991.1| hypothetical protein PHAVU_009G256100g [Phaseolus...   241   1e-61
ref|XP_002276956.1| PREDICTED: DNA-directed RNA polymerase II su...   240   3e-61
ref|XP_004487774.1| PREDICTED: DNA-directed RNA polymerase II su...   239   6e-61
ref|XP_002976415.1| hypothetical protein SELMODRAFT_232741 [Sela...   239   6e-61
ref|XP_006419407.1| hypothetical protein CICLE_v10006256mg [Citr...   238   1e-60
ref|NP_001235803.1| uncharacterized protein LOC100305979 [Glycin...   238   1e-60
gb|EMJ24706.1| hypothetical protein PRUPE_ppa013594mg [Prunus pe...   236   4e-60
ref|XP_004239877.1| PREDICTED: DNA-directed RNA polymerase II su...   236   5e-60
gb|EOY06688.1| RNA polymerases M/15 Kd subunit [Theobroma cacao]      236   6e-60
ref|XP_003594777.1| DNA-directed RNA polymerase II subunit RPB9 ...   235   8e-60
ref|XP_003546327.1| PREDICTED: DNA-directed RNA polymerases II, ...   233   3e-59
ref|XP_004295094.1| PREDICTED: DNA-directed RNA polymerase II su...   233   5e-59
ref|XP_002962042.1| hypothetical protein SELMODRAFT_77443 [Selag...   232   9e-59
ref|XP_006664099.1| PREDICTED: DNA-directed RNA polymerases II, ...   231   2e-58
ref|XP_002312337.1| DNA-directed RNA polymerase II family protei...   231   2e-58
gb|ABA98929.1| DNA-directed RNA polymerase II 14.5 kDa polypepti...   229   5e-58
ref|NP_001150634.1| LOC100284267 [Zea mays] gi|195640756|gb|ACG3...   227   2e-57
ref|XP_001782379.1| predicted protein [Physcomitrella patens] gi...   227   2e-57
ref|XP_002443356.1| hypothetical protein SORBIDRAFT_08g018130 [S...   227   3e-57

>ref|XP_004134242.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB9-like
           [Cucumis sativus] gi|449517969|ref|XP_004166016.1|
           PREDICTED: DNA-directed RNA polymerase II subunit
           RPB9-like [Cucumis sativus]
          Length = 114

 Score =  242 bits (617), Expect = 9e-62
 Identities = 107/114 (93%), Positives = 111/114 (97%)
 Frame = -3

Query: 556 MSTMKFCRECNNILYPKEDRDQKILLYACRNCDHQEVADNNCVYRNEIHHSAGERTQVLQ 377
           MSTMKFCRECNNILYPKEDRD+KILLYACRNCDHQEVADNNCVYRNEIHH+ GERTQVLQ
Sbjct: 1   MSTMKFCRECNNILYPKEDRDEKILLYACRNCDHQEVADNNCVYRNEIHHAVGERTQVLQ 60

Query: 376 DVAADPTLPRTKSVRCTQCNHGEAVFFQAPSRGEEGMTLFFVCCNPNCGHRWRD 215
           DVAADPTLPRTK+VRC QCNHGEAVFFQA +RGEEGMTLFFVCCNPNCGHRWRD
Sbjct: 61  DVAADPTLPRTKAVRCAQCNHGEAVFFQATARGEEGMTLFFVCCNPNCGHRWRD 114


>gb|ESW10991.1| hypothetical protein PHAVU_009G256100g [Phaseolus vulgaris]
          Length = 114

 Score =  241 bits (616), Expect = 1e-61
 Identities = 109/114 (95%), Positives = 111/114 (97%)
 Frame = -3

Query: 556 MSTMKFCRECNNILYPKEDRDQKILLYACRNCDHQEVADNNCVYRNEIHHSAGERTQVLQ 377
           MSTMKFCRECNNILYPKEDRDQKILLYACRNCDHQEVADN CVYRNEIHHS GERTQVLQ
Sbjct: 1   MSTMKFCRECNNILYPKEDRDQKILLYACRNCDHQEVADNFCVYRNEIHHSVGERTQVLQ 60

Query: 376 DVAADPTLPRTKSVRCTQCNHGEAVFFQAPSRGEEGMTLFFVCCNPNCGHRWRD 215
           DVAADPTLPRTKSVRCTQCNHGEAVFFQA +RGEEGMTLFFVCCNPNCG+RWRD
Sbjct: 61  DVAADPTLPRTKSVRCTQCNHGEAVFFQATARGEEGMTLFFVCCNPNCGYRWRD 114


>ref|XP_002276956.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB9 [Vitis
           vinifera] gi|147769002|emb|CAN66735.1| hypothetical
           protein VITISV_024186 [Vitis vinifera]
           gi|296083263|emb|CBI22899.3| unnamed protein product
           [Vitis vinifera]
          Length = 114

 Score =  240 bits (612), Expect = 3e-61
 Identities = 107/114 (93%), Positives = 111/114 (97%)
 Frame = -3

Query: 556 MSTMKFCRECNNILYPKEDRDQKILLYACRNCDHQEVADNNCVYRNEIHHSAGERTQVLQ 377
           MSTMKFCRECNNILYPKEDR+QKILLYACRNCDHQEVA+NNCVYRNEIHHS GERTQVLQ
Sbjct: 1   MSTMKFCRECNNILYPKEDREQKILLYACRNCDHQEVAENNCVYRNEIHHSVGERTQVLQ 60

Query: 376 DVAADPTLPRTKSVRCTQCNHGEAVFFQAPSRGEEGMTLFFVCCNPNCGHRWRD 215
           DVAADPTLPRTKSVRC QCNHGEAVFFQA +RGEEGMTLFFVCCNPNCG+RWRD
Sbjct: 61  DVAADPTLPRTKSVRCAQCNHGEAVFFQATARGEEGMTLFFVCCNPNCGYRWRD 114


>ref|XP_004487774.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB9-like [Cicer
           arietinum]
          Length = 114

 Score =  239 bits (610), Expect = 6e-61
 Identities = 107/114 (93%), Positives = 110/114 (96%)
 Frame = -3

Query: 556 MSTMKFCRECNNILYPKEDRDQKILLYACRNCDHQEVADNNCVYRNEIHHSAGERTQVLQ 377
           MSTMKFCRECNNILYPKEDRDQ+ LLYACRNCDHQEVADN CVYRNEIHHS GERTQVLQ
Sbjct: 1   MSTMKFCRECNNILYPKEDRDQRNLLYACRNCDHQEVADNYCVYRNEIHHSVGERTQVLQ 60

Query: 376 DVAADPTLPRTKSVRCTQCNHGEAVFFQAPSRGEEGMTLFFVCCNPNCGHRWRD 215
           DVAADPTLPRTK+VRCTQCNHGEAVFFQA +RGEEGMTLFFVCCNPNCGHRWRD
Sbjct: 61  DVAADPTLPRTKAVRCTQCNHGEAVFFQATARGEEGMTLFFVCCNPNCGHRWRD 114


>ref|XP_002976415.1| hypothetical protein SELMODRAFT_232741 [Selaginella moellendorffii]
           gi|302811122|ref|XP_002987251.1| hypothetical protein
           SELMODRAFT_125489 [Selaginella moellendorffii]
           gi|300145148|gb|EFJ11827.1| hypothetical protein
           SELMODRAFT_125489 [Selaginella moellendorffii]
           gi|300156045|gb|EFJ22675.1| hypothetical protein
           SELMODRAFT_232741 [Selaginella moellendorffii]
          Length = 115

 Score =  239 bits (610), Expect = 6e-61
 Identities = 106/114 (92%), Positives = 111/114 (97%)
 Frame = -3

Query: 556 MSTMKFCRECNNILYPKEDRDQKILLYACRNCDHQEVADNNCVYRNEIHHSAGERTQVLQ 377
           MSTMKFCRECNNILYPKEDRDQKILLYACRNCDHQEVADNNCVYRNE+HHSAGERTQVLQ
Sbjct: 1   MSTMKFCRECNNILYPKEDRDQKILLYACRNCDHQEVADNNCVYRNEVHHSAGERTQVLQ 60

Query: 376 DVAADPTLPRTKSVRCTQCNHGEAVFFQAPSRGEEGMTLFFVCCNPNCGHRWRD 215
           DVA+DPTLPRTKSVRC +C HGEAVFFQA +RGEEGMTLFFVCCNPNCG+RWRD
Sbjct: 61  DVASDPTLPRTKSVRCVRCKHGEAVFFQATTRGEEGMTLFFVCCNPNCGYRWRD 114


>ref|XP_006419407.1| hypothetical protein CICLE_v10006256mg [Citrus clementina]
           gi|568871362|ref|XP_006488857.1| PREDICTED: DNA-directed
           RNA polymerases II, IV and V subunit 9A-like [Citrus
           sinensis] gi|557521280|gb|ESR32647.1| hypothetical
           protein CICLE_v10006256mg [Citrus clementina]
          Length = 114

 Score =  238 bits (608), Expect = 1e-60
 Identities = 105/114 (92%), Positives = 110/114 (96%)
 Frame = -3

Query: 556 MSTMKFCRECNNILYPKEDRDQKILLYACRNCDHQEVADNNCVYRNEIHHSAGERTQVLQ 377
           MSTMKFCRECNNILYPKED+DQKILLYACRNCDHQEVADNNCVYRNE+HHS GERTQVLQ
Sbjct: 1   MSTMKFCRECNNILYPKEDKDQKILLYACRNCDHQEVADNNCVYRNEVHHSVGERTQVLQ 60

Query: 376 DVAADPTLPRTKSVRCTQCNHGEAVFFQAPSRGEEGMTLFFVCCNPNCGHRWRD 215
           DVAADPTLPRTK+VRC +C HGEAVFFQA SRGEEGMTLFFVCCNPNCGHRWR+
Sbjct: 61  DVAADPTLPRTKAVRCVKCQHGEAVFFQATSRGEEGMTLFFVCCNPNCGHRWRE 114


>ref|NP_001235803.1| uncharacterized protein LOC100305979 [Glycine max]
           gi|255627167|gb|ACU13928.1| unknown [Glycine max]
          Length = 114

 Score =  238 bits (608), Expect = 1e-60
 Identities = 106/114 (92%), Positives = 110/114 (96%)
 Frame = -3

Query: 556 MSTMKFCRECNNILYPKEDRDQKILLYACRNCDHQEVADNNCVYRNEIHHSAGERTQVLQ 377
           MS MKFCRECNNILYPKEDRDQK+LL+ACRNCDHQEVADN CVYRNEIHHS GERTQVLQ
Sbjct: 1   MSAMKFCRECNNILYPKEDRDQKVLLFACRNCDHQEVADNFCVYRNEIHHSVGERTQVLQ 60

Query: 376 DVAADPTLPRTKSVRCTQCNHGEAVFFQAPSRGEEGMTLFFVCCNPNCGHRWRD 215
           DVAADPTLPRTKSVRC+QCNHGEAVFFQA +RGEEGMTLFFVCCNPNCGHRWRD
Sbjct: 61  DVAADPTLPRTKSVRCSQCNHGEAVFFQATARGEEGMTLFFVCCNPNCGHRWRD 114


>gb|EMJ24706.1| hypothetical protein PRUPE_ppa013594mg [Prunus persica]
          Length = 114

 Score =  236 bits (603), Expect = 4e-60
 Identities = 103/114 (90%), Positives = 111/114 (97%)
 Frame = -3

Query: 556 MSTMKFCRECNNILYPKEDRDQKILLYACRNCDHQEVADNNCVYRNEIHHSAGERTQVLQ 377
           MSTMKFCRECNNILYPKED+DQKILLYACRNCDHQEVADNNCVYRNEIHH+ GERTQ+LQ
Sbjct: 1   MSTMKFCRECNNILYPKEDKDQKILLYACRNCDHQEVADNNCVYRNEIHHAVGERTQILQ 60

Query: 376 DVAADPTLPRTKSVRCTQCNHGEAVFFQAPSRGEEGMTLFFVCCNPNCGHRWRD 215
           DVAADPTLPRTK+VRC++C HGEAVFFQA +RGEEGMTLFFVCCNP+CGHRWRD
Sbjct: 61  DVAADPTLPRTKAVRCSECKHGEAVFFQATARGEEGMTLFFVCCNPSCGHRWRD 114


>ref|XP_004239877.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB9-like
           [Solanum lycopersicum] gi|565378585|ref|XP_006355736.1|
           PREDICTED: DNA-directed RNA polymerases II, IV and V
           subunit 9A-like [Solanum tuberosum]
          Length = 114

 Score =  236 bits (602), Expect = 5e-60
 Identities = 105/114 (92%), Positives = 110/114 (96%)
 Frame = -3

Query: 556 MSTMKFCRECNNILYPKEDRDQKILLYACRNCDHQEVADNNCVYRNEIHHSAGERTQVLQ 377
           MSTMKFCRECNNILYPKED++QKILLYACRNCDHQE A+NNCVYRNEIHHSA ERTQVLQ
Sbjct: 1   MSTMKFCRECNNILYPKEDKEQKILLYACRNCDHQEPAENNCVYRNEIHHSAAERTQVLQ 60

Query: 376 DVAADPTLPRTKSVRCTQCNHGEAVFFQAPSRGEEGMTLFFVCCNPNCGHRWRD 215
           DVAADPTLPRTKSVRC+QC HGEAVFFQA +RGEEGMTLFFVCCNPNCGHRWRD
Sbjct: 61  DVAADPTLPRTKSVRCSQCGHGEAVFFQATARGEEGMTLFFVCCNPNCGHRWRD 114


>gb|EOY06688.1| RNA polymerases M/15 Kd subunit [Theobroma cacao]
          Length = 114

 Score =  236 bits (601), Expect = 6e-60
 Identities = 104/114 (91%), Positives = 109/114 (95%)
 Frame = -3

Query: 556 MSTMKFCRECNNILYPKEDRDQKILLYACRNCDHQEVADNNCVYRNEIHHSAGERTQVLQ 377
           MSTMKFCRECNNILYPKEDR+QKILLYACRNCDHQEVA+NNCVYRNE+HHSAGERTQ+LQ
Sbjct: 1   MSTMKFCRECNNILYPKEDREQKILLYACRNCDHQEVAENNCVYRNEVHHSAGERTQILQ 60

Query: 376 DVAADPTLPRTKSVRCTQCNHGEAVFFQAPSRGEEGMTLFFVCCNPNCGHRWRD 215
           DVAADPTLPRTKSV C  C HGEAVFFQA +RGEEGMTLFFVCCNPNCGHRWRD
Sbjct: 61  DVAADPTLPRTKSVICANCKHGEAVFFQATARGEEGMTLFFVCCNPNCGHRWRD 114


>ref|XP_003594777.1| DNA-directed RNA polymerase II subunit RPB9 [Medicago truncatula]
           gi|87240462|gb|ABD32320.1| DNA-directed RNA polymerase,
           subunit C11/M/9 [Medicago truncatula]
           gi|217075262|gb|ACJ85991.1| unknown [Medicago
           truncatula] gi|355483825|gb|AES65028.1| DNA-directed RNA
           polymerase II subunit RPB9 [Medicago truncatula]
           gi|388497558|gb|AFK36845.1| unknown [Medicago
           truncatula]
          Length = 114

 Score =  235 bits (600), Expect = 8e-60
 Identities = 105/114 (92%), Positives = 108/114 (94%)
 Frame = -3

Query: 556 MSTMKFCRECNNILYPKEDRDQKILLYACRNCDHQEVADNNCVYRNEIHHSAGERTQVLQ 377
           MSTMKFCRECNNILYPKEDR+QKILLYACRNCDHQE ADN CVYRNEIHHS  ERTQVLQ
Sbjct: 1   MSTMKFCRECNNILYPKEDREQKILLYACRNCDHQEAADNFCVYRNEIHHSVAERTQVLQ 60

Query: 376 DVAADPTLPRTKSVRCTQCNHGEAVFFQAPSRGEEGMTLFFVCCNPNCGHRWRD 215
           DVAADPTLPRTK+VRC QCNHGEAVFFQA +RGEEGMTLFFVCCNPNCGHRWRD
Sbjct: 61  DVAADPTLPRTKAVRCVQCNHGEAVFFQATARGEEGMTLFFVCCNPNCGHRWRD 114


>ref|XP_003546327.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
           9A-like [Glycine max]
          Length = 114

 Score =  233 bits (595), Expect = 3e-59
 Identities = 104/114 (91%), Positives = 108/114 (94%)
 Frame = -3

Query: 556 MSTMKFCRECNNILYPKEDRDQKILLYACRNCDHQEVADNNCVYRNEIHHSAGERTQVLQ 377
           MS MKFCRECNNILYPKEDR+QK+LL+ACRNCDHQEVADN CVYRNEI H  GERTQVLQ
Sbjct: 1   MSAMKFCRECNNILYPKEDREQKVLLFACRNCDHQEVADNFCVYRNEIQHPVGERTQVLQ 60

Query: 376 DVAADPTLPRTKSVRCTQCNHGEAVFFQAPSRGEEGMTLFFVCCNPNCGHRWRD 215
           DVAADPTLPRTKSVRCTQCNHGEAVFFQA +RGEEGMTLFFVCCNPNCGHRWRD
Sbjct: 61  DVAADPTLPRTKSVRCTQCNHGEAVFFQATARGEEGMTLFFVCCNPNCGHRWRD 114


>ref|XP_004295094.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB9-like
           [Fragaria vesca subsp. vesca]
          Length = 114

 Score =  233 bits (593), Expect = 5e-59
 Identities = 102/114 (89%), Positives = 109/114 (95%)
 Frame = -3

Query: 556 MSTMKFCRECNNILYPKEDRDQKILLYACRNCDHQEVADNNCVYRNEIHHSAGERTQVLQ 377
           MSTMKFCRECNNILYPKE+++ KILLYACRNCDHQEVADNNCVYRNEIHHS GERTQ+LQ
Sbjct: 1   MSTMKFCRECNNILYPKENKEDKILLYACRNCDHQEVADNNCVYRNEIHHSVGERTQILQ 60

Query: 376 DVAADPTLPRTKSVRCTQCNHGEAVFFQAPSRGEEGMTLFFVCCNPNCGHRWRD 215
           DVAADPTLPRTK+VRC QC HGEAVFFQA +RGEEGMTLFFVCCNPNCG+RWRD
Sbjct: 61  DVAADPTLPRTKAVRCAQCKHGEAVFFQATARGEEGMTLFFVCCNPNCGYRWRD 114


>ref|XP_002962042.1| hypothetical protein SELMODRAFT_77443 [Selaginella moellendorffii]
           gi|302775260|ref|XP_002971047.1| hypothetical protein
           SELMODRAFT_95006 [Selaginella moellendorffii]
           gi|300161029|gb|EFJ27645.1| hypothetical protein
           SELMODRAFT_95006 [Selaginella moellendorffii]
           gi|300170701|gb|EFJ37302.1| hypothetical protein
           SELMODRAFT_77443 [Selaginella moellendorffii]
          Length = 114

 Score =  232 bits (591), Expect = 9e-59
 Identities = 101/114 (88%), Positives = 109/114 (95%)
 Frame = -3

Query: 556 MSTMKFCRECNNILYPKEDRDQKILLYACRNCDHQEVADNNCVYRNEIHHSAGERTQVLQ 377
           MSTMKFCRECNNILYPKEDRDQK+LLYACRNCDHQE ADNNCVYRNE+HH+A ERTQVLQ
Sbjct: 1   MSTMKFCRECNNILYPKEDRDQKLLLYACRNCDHQEAADNNCVYRNEVHHTADERTQVLQ 60

Query: 376 DVAADPTLPRTKSVRCTQCNHGEAVFFQAPSRGEEGMTLFFVCCNPNCGHRWRD 215
           DVA+DPTLPRTK VRC++C HGEAVFFQA +RGEEGMTLFFVCCNPNCG+RWRD
Sbjct: 61  DVASDPTLPRTKDVRCSRCKHGEAVFFQATARGEEGMTLFFVCCNPNCGYRWRD 114


>ref|XP_006664099.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
           9B-like [Oryza brachyantha]
          Length = 114

 Score =  231 bits (588), Expect = 2e-58
 Identities = 103/114 (90%), Positives = 107/114 (93%)
 Frame = -3

Query: 556 MSTMKFCRECNNILYPKEDRDQKILLYACRNCDHQEVADNNCVYRNEIHHSAGERTQVLQ 377
           MSTMKFCRECNNILYPKEDRDQKILLYACRNCDHQEVADNNCVYRN +HHSAGE TQVLQ
Sbjct: 1   MSTMKFCRECNNILYPKEDRDQKILLYACRNCDHQEVADNNCVYRNVVHHSAGEFTQVLQ 60

Query: 376 DVAADPTLPRTKSVRCTQCNHGEAVFFQAPSRGEEGMTLFFVCCNPNCGHRWRD 215
           DVA DPTLPRTKSVRC  C HGEAVFFQA +RGEEGMTLFFVCCNP+CGHRWR+
Sbjct: 61  DVAGDPTLPRTKSVRCAVCGHGEAVFFQATARGEEGMTLFFVCCNPSCGHRWRE 114


>ref|XP_002312337.1| DNA-directed RNA polymerase II family protein [Populus trichocarpa]
           gi|222852157|gb|EEE89704.1| DNA-directed RNA polymerase
           II family protein [Populus trichocarpa]
          Length = 114

 Score =  231 bits (588), Expect = 2e-58
 Identities = 102/114 (89%), Positives = 107/114 (93%)
 Frame = -3

Query: 556 MSTMKFCRECNNILYPKEDRDQKILLYACRNCDHQEVADNNCVYRNEIHHSAGERTQVLQ 377
           MSTMKFCRECNNILYP+EDRDQKILLYACRNCDHQE+AD+NCVYRNE+HHS  ERTQVLQ
Sbjct: 1   MSTMKFCRECNNILYPREDRDQKILLYACRNCDHQEIADDNCVYRNEVHHSVAERTQVLQ 60

Query: 376 DVAADPTLPRTKSVRCTQCNHGEAVFFQAPSRGEEGMTLFFVCCNPNCGHRWRD 215
           DVAADPTLPRTK+V CT C H EAVFFQA SRGEEGMTLFFVCCNPNCGHRWRD
Sbjct: 61  DVAADPTLPRTKAVTCTVCKHPEAVFFQATSRGEEGMTLFFVCCNPNCGHRWRD 114


>gb|ABA98929.1| DNA-directed RNA polymerase II 14.5 kDa polypeptide, putative,
           expressed [Oryza sativa Japonica Group]
           gi|125537020|gb|EAY83508.1| hypothetical protein
           OsI_38722 [Oryza sativa Indica Group]
           gi|125579719|gb|EAZ20865.1| hypothetical protein
           OsJ_36504 [Oryza sativa Japonica Group]
          Length = 114

 Score =  229 bits (585), Expect = 5e-58
 Identities = 102/114 (89%), Positives = 107/114 (93%)
 Frame = -3

Query: 556 MSTMKFCRECNNILYPKEDRDQKILLYACRNCDHQEVADNNCVYRNEIHHSAGERTQVLQ 377
           MSTMKFCRECNNILYPKEDRDQKILLYACRNCDHQEVADNNCVYRN +HHSAGE TQVLQ
Sbjct: 1   MSTMKFCRECNNILYPKEDRDQKILLYACRNCDHQEVADNNCVYRNVVHHSAGEFTQVLQ 60

Query: 376 DVAADPTLPRTKSVRCTQCNHGEAVFFQAPSRGEEGMTLFFVCCNPNCGHRWRD 215
           DVA DPTLPRTK+VRC  C HGEAVFFQA +RGEEGMTLFFVCCNP+CGHRWR+
Sbjct: 61  DVAGDPTLPRTKAVRCAVCGHGEAVFFQATARGEEGMTLFFVCCNPSCGHRWRE 114


>ref|NP_001150634.1| LOC100284267 [Zea mays] gi|195640756|gb|ACG39846.1| DNA-directed
           RNA polymerase II 14.5 kDa polypeptide [Zea mays]
           gi|414878124|tpg|DAA55255.1| TPA: DNA-directed RNA
           polymerase subunit [Zea mays]
          Length = 114

 Score =  227 bits (579), Expect = 2e-57
 Identities = 100/114 (87%), Positives = 108/114 (94%)
 Frame = -3

Query: 556 MSTMKFCRECNNILYPKEDRDQKILLYACRNCDHQEVADNNCVYRNEIHHSAGERTQVLQ 377
           MSTMKFCRECNNILYPKEDR+QK+LLYACRNCDHQEVADNNCVYRN +HHSAGE TQVLQ
Sbjct: 1   MSTMKFCRECNNILYPKEDREQKVLLYACRNCDHQEVADNNCVYRNVVHHSAGEFTQVLQ 60

Query: 376 DVAADPTLPRTKSVRCTQCNHGEAVFFQAPSRGEEGMTLFFVCCNPNCGHRWRD 215
           DVA DPTLPRTKSVRC+ C HGEAVFFQA +RGEEGMTLFFVCCNP+CG+RWR+
Sbjct: 61  DVAGDPTLPRTKSVRCSSCGHGEAVFFQATARGEEGMTLFFVCCNPSCGNRWRE 114


>ref|XP_001782379.1| predicted protein [Physcomitrella patens]
           gi|162666171|gb|EDQ52833.1| predicted protein
           [Physcomitrella patens]
          Length = 114

 Score =  227 bits (579), Expect = 2e-57
 Identities = 99/114 (86%), Positives = 108/114 (94%)
 Frame = -3

Query: 556 MSTMKFCRECNNILYPKEDRDQKILLYACRNCDHQEVADNNCVYRNEIHHSAGERTQVLQ 377
           MSTMKFCRECNNILYP+EDRD+K+LLYACRNCDHQEVADNNCVYRNE+ HSA ERTQVLQ
Sbjct: 1   MSTMKFCRECNNILYPREDRDKKVLLYACRNCDHQEVADNNCVYRNEVLHSADERTQVLQ 60

Query: 376 DVAADPTLPRTKSVRCTQCNHGEAVFFQAPSRGEEGMTLFFVCCNPNCGHRWRD 215
           D+A+DPTLPRTK+VRC  C HGEAVFFQA +RGEEGMTLFFVCCNPNCG+RWRD
Sbjct: 61  DIASDPTLPRTKNVRCANCQHGEAVFFQATARGEEGMTLFFVCCNPNCGYRWRD 114


>ref|XP_002443356.1| hypothetical protein SORBIDRAFT_08g018130 [Sorghum bicolor]
           gi|241944049|gb|EES17194.1| hypothetical protein
           SORBIDRAFT_08g018130 [Sorghum bicolor]
          Length = 114

 Score =  227 bits (578), Expect = 3e-57
 Identities = 100/114 (87%), Positives = 107/114 (93%)
 Frame = -3

Query: 556 MSTMKFCRECNNILYPKEDRDQKILLYACRNCDHQEVADNNCVYRNEIHHSAGERTQVLQ 377
           MSTMKFCRECNNILYPKEDR+QK+LLYACRNCDHQEVADNNCVYRN +HHSAGE TQVLQ
Sbjct: 1   MSTMKFCRECNNILYPKEDREQKVLLYACRNCDHQEVADNNCVYRNVVHHSAGEFTQVLQ 60

Query: 376 DVAADPTLPRTKSVRCTQCNHGEAVFFQAPSRGEEGMTLFFVCCNPNCGHRWRD 215
           DVA DPTLPRTKSVRC  C HGEAVFFQA +RGEEGMTLFFVCCNP+CG+RWR+
Sbjct: 61  DVAGDPTLPRTKSVRCASCGHGEAVFFQATARGEEGMTLFFVCCNPSCGNRWRE 114