BLASTX nr result

ID: Rheum21_contig00022832 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00022832
         (231 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG40343.1|AF324991_1 AT4g13930 [Arabidopsis thaliana]             160   2e-37
ref|NP_193129.1| serine hydroxymethyltransferase 4 [Arabidopsis ...   160   2e-37
gb|AFR41401.1| serine hydroxymethyltransferase, partial [Populus...   159   3e-37
gb|AFR41398.1| serine hydroxymethyltransferase, partial [Populus...   159   3e-37
gb|AFR41390.1| serine hydroxymethyltransferase, partial [Populus...   159   3e-37
gb|AFR41388.1| serine hydroxymethyltransferase, partial [Populus...   159   3e-37
gb|AFR41387.1| serine hydroxymethyltransferase, partial [Populus...   159   3e-37
gb|AFR41384.1| serine hydroxymethyltransferase, partial [Populus...   159   3e-37
gb|AFR41376.1| serine hydroxymethyltransferase, partial [Populus...   159   3e-37
gb|AFR41373.1| serine hydroxymethyltransferase, partial [Populus...   159   3e-37
gb|AFR41372.1| serine hydroxymethyltransferase, partial [Populus...   159   3e-37
gb|AFR41371.1| serine hydroxymethyltransferase, partial [Populus...   159   3e-37
gb|AFR41370.1| serine hydroxymethyltransferase, partial [Populus...   159   3e-37
gb|AFR41369.1| serine hydroxymethyltransferase, partial [Populus...   159   3e-37
gb|ABO61376.1| serine hydroxymethyltransferase [Populus tremuloi...   159   3e-37
ref|XP_006492539.1| PREDICTED: serine hydroxymethyltransferase 4...   158   6e-37
ref|XP_006421019.1| hypothetical protein CICLE_v10004902mg [Citr...   158   6e-37
gb|EOY05145.1| Serine hydroxymethyltransferase 4 isoform 2 [Theo...   158   6e-37
gb|EOY05144.1| Serine hydroxymethyltransferase 4 isoform 1 [Theo...   158   6e-37
gb|AAM64493.1| hydroxymethyltransferase [Arabidopsis thaliana]        158   6e-37

>gb|AAG40343.1|AF324991_1 AT4g13930 [Arabidopsis thaliana]
          Length = 471

 Score =  160 bits (405), Expect = 2e-37
 Identities = 73/76 (96%), Positives = 75/76 (98%)
 Frame = +3

Query: 3   LDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNFQTGYIDYDRLEEKALDFRPKLII 182
           LDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNF TGYIDYD+LEEKALDFRPKL+I
Sbjct: 127 LDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNFTTGYIDYDKLEEKALDFRPKLLI 186

Query: 183 CGGSAYPRDWDYARFR 230
           CGGSAYPRDWDYARFR
Sbjct: 187 CGGSAYPRDWDYARFR 202


>ref|NP_193129.1| serine hydroxymethyltransferase 4 [Arabidopsis thaliana]
           gi|75318092|sp|O23254.1|GLYC4_ARATH RecName: Full=Serine
           hydroxymethyltransferase 4; Short=AtSHMT4; AltName:
           Full=Glycine hydroxymethyltransferase 4; AltName:
           Full=Serine methylase 4
           gi|13605527|gb|AAK32757.1|AF361589_1 AT4g13930/dl3005c
           [Arabidopsis thaliana] gi|2244749|emb|CAB10172.1|
           hydroxymethyltransferase [Arabidopsis thaliana]
           gi|7268097|emb|CAB78435.1| hydroxymethyltransferase
           [Arabidopsis thaliana] gi|20334774|gb|AAM16248.1|
           AT4g13930/dl3005c [Arabidopsis thaliana]
           gi|332657944|gb|AEE83344.1| serine
           hydroxymethyltransferase 4 [Arabidopsis thaliana]
          Length = 471

 Score =  160 bits (405), Expect = 2e-37
 Identities = 73/76 (96%), Positives = 75/76 (98%)
 Frame = +3

Query: 3   LDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNFQTGYIDYDRLEEKALDFRPKLII 182
           LDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNF TGYIDYD+LEEKALDFRPKL+I
Sbjct: 127 LDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNFTTGYIDYDKLEEKALDFRPKLLI 186

Query: 183 CGGSAYPRDWDYARFR 230
           CGGSAYPRDWDYARFR
Sbjct: 187 CGGSAYPRDWDYARFR 202


>gb|AFR41401.1| serine hydroxymethyltransferase, partial [Populus nigra]
          Length = 141

 Score =  159 bits (403), Expect = 3e-37
 Identities = 74/76 (97%), Positives = 74/76 (97%)
 Frame = +3

Query: 3   LDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNFQTGYIDYDRLEEKALDFRPKLII 182
           LDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVN QTGYIDYDRLEEKALDFRPKLII
Sbjct: 42  LDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSQTGYIDYDRLEEKALDFRPKLII 101

Query: 183 CGGSAYPRDWDYARFR 230
           CGGSAYPRDWDY RFR
Sbjct: 102 CGGSAYPRDWDYKRFR 117


>gb|AFR41398.1| serine hydroxymethyltransferase, partial [Populus nigra]
          Length = 144

 Score =  159 bits (403), Expect = 3e-37
 Identities = 74/76 (97%), Positives = 74/76 (97%)
 Frame = +3

Query: 3   LDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNFQTGYIDYDRLEEKALDFRPKLII 182
           LDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVN QTGYIDYDRLEEKALDFRPKLII
Sbjct: 45  LDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSQTGYIDYDRLEEKALDFRPKLII 104

Query: 183 CGGSAYPRDWDYARFR 230
           CGGSAYPRDWDY RFR
Sbjct: 105 CGGSAYPRDWDYKRFR 120


>gb|AFR41390.1| serine hydroxymethyltransferase, partial [Populus nigra]
          Length = 138

 Score =  159 bits (403), Expect = 3e-37
 Identities = 74/76 (97%), Positives = 74/76 (97%)
 Frame = +3

Query: 3   LDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNFQTGYIDYDRLEEKALDFRPKLII 182
           LDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVN QTGYIDYDRLEEKALDFRPKLII
Sbjct: 39  LDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSQTGYIDYDRLEEKALDFRPKLII 98

Query: 183 CGGSAYPRDWDYARFR 230
           CGGSAYPRDWDY RFR
Sbjct: 99  CGGSAYPRDWDYKRFR 114


>gb|AFR41388.1| serine hydroxymethyltransferase, partial [Populus nigra]
          Length = 135

 Score =  159 bits (403), Expect = 3e-37
 Identities = 74/76 (97%), Positives = 74/76 (97%)
 Frame = +3

Query: 3   LDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNFQTGYIDYDRLEEKALDFRPKLII 182
           LDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVN QTGYIDYDRLEEKALDFRPKLII
Sbjct: 36  LDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSQTGYIDYDRLEEKALDFRPKLII 95

Query: 183 CGGSAYPRDWDYARFR 230
           CGGSAYPRDWDY RFR
Sbjct: 96  CGGSAYPRDWDYKRFR 111


>gb|AFR41387.1| serine hydroxymethyltransferase, partial [Populus nigra]
           gi|403328038|gb|AFR41392.1| serine
           hydroxymethyltransferase, partial [Populus nigra]
           gi|403328040|gb|AFR41393.1| serine
           hydroxymethyltransferase, partial [Populus nigra]
           gi|403328046|gb|AFR41396.1| serine
           hydroxymethyltransferase, partial [Populus nigra]
           gi|403328052|gb|AFR41399.1| serine
           hydroxymethyltransferase, partial [Populus nigra]
           gi|403328054|gb|AFR41400.1| serine
           hydroxymethyltransferase, partial [Populus nigra]
          Length = 142

 Score =  159 bits (403), Expect = 3e-37
 Identities = 74/76 (97%), Positives = 74/76 (97%)
 Frame = +3

Query: 3   LDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNFQTGYIDYDRLEEKALDFRPKLII 182
           LDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVN QTGYIDYDRLEEKALDFRPKLII
Sbjct: 43  LDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSQTGYIDYDRLEEKALDFRPKLII 102

Query: 183 CGGSAYPRDWDYARFR 230
           CGGSAYPRDWDY RFR
Sbjct: 103 CGGSAYPRDWDYKRFR 118


>gb|AFR41384.1| serine hydroxymethyltransferase, partial [Populus fremontii]
           gi|403328024|gb|AFR41385.1| serine
           hydroxymethyltransferase, partial [Populus fremontii]
          Length = 143

 Score =  159 bits (403), Expect = 3e-37
 Identities = 74/76 (97%), Positives = 74/76 (97%)
 Frame = +3

Query: 3   LDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNFQTGYIDYDRLEEKALDFRPKLII 182
           LDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVN QTGYIDYDRLEEKALDFRPKLII
Sbjct: 44  LDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSQTGYIDYDRLEEKALDFRPKLII 103

Query: 183 CGGSAYPRDWDYARFR 230
           CGGSAYPRDWDY RFR
Sbjct: 104 CGGSAYPRDWDYKRFR 119


>gb|AFR41376.1| serine hydroxymethyltransferase, partial [Populus fremontii]
           gi|403328008|gb|AFR41377.1| serine
           hydroxymethyltransferase, partial [Populus fremontii]
           gi|403328010|gb|AFR41378.1| serine
           hydroxymethyltransferase, partial [Populus fremontii]
           gi|403328016|gb|AFR41381.1| serine
           hydroxymethyltransferase, partial [Populus fremontii]
           gi|403328026|gb|AFR41386.1| serine
           hydroxymethyltransferase, partial [Populus fremontii]
          Length = 142

 Score =  159 bits (403), Expect = 3e-37
 Identities = 74/76 (97%), Positives = 74/76 (97%)
 Frame = +3

Query: 3   LDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNFQTGYIDYDRLEEKALDFRPKLII 182
           LDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVN QTGYIDYDRLEEKALDFRPKLII
Sbjct: 43  LDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSQTGYIDYDRLEEKALDFRPKLII 102

Query: 183 CGGSAYPRDWDYARFR 230
           CGGSAYPRDWDY RFR
Sbjct: 103 CGGSAYPRDWDYKRFR 118


>gb|AFR41373.1| serine hydroxymethyltransferase, partial [Populus fremontii]
           gi|403328012|gb|AFR41379.1| serine
           hydroxymethyltransferase, partial [Populus fremontii]
          Length = 144

 Score =  159 bits (403), Expect = 3e-37
 Identities = 74/76 (97%), Positives = 74/76 (97%)
 Frame = +3

Query: 3   LDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNFQTGYIDYDRLEEKALDFRPKLII 182
           LDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVN QTGYIDYDRLEEKALDFRPKLII
Sbjct: 45  LDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSQTGYIDYDRLEEKALDFRPKLII 104

Query: 183 CGGSAYPRDWDYARFR 230
           CGGSAYPRDWDY RFR
Sbjct: 105 CGGSAYPRDWDYKRFR 120


>gb|AFR41372.1| serine hydroxymethyltransferase, partial [Populus fremontii]
           gi|403328002|gb|AFR41374.1| serine
           hydroxymethyltransferase, partial [Populus fremontii]
           gi|403328004|gb|AFR41375.1| serine
           hydroxymethyltransferase, partial [Populus fremontii]
           gi|403328014|gb|AFR41380.1| serine
           hydroxymethyltransferase, partial [Populus fremontii]
           gi|403328018|gb|AFR41382.1| serine
           hydroxymethyltransferase, partial [Populus fremontii]
           gi|403328020|gb|AFR41383.1| serine
           hydroxymethyltransferase, partial [Populus fremontii]
          Length = 144

 Score =  159 bits (403), Expect = 3e-37
 Identities = 74/76 (97%), Positives = 74/76 (97%)
 Frame = +3

Query: 3   LDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNFQTGYIDYDRLEEKALDFRPKLII 182
           LDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVN QTGYIDYDRLEEKALDFRPKLII
Sbjct: 45  LDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSQTGYIDYDRLEEKALDFRPKLII 104

Query: 183 CGGSAYPRDWDYARFR 230
           CGGSAYPRDWDY RFR
Sbjct: 105 CGGSAYPRDWDYKRFR 120


>gb|AFR41371.1| serine hydroxymethyltransferase, partial [Populus alba]
          Length = 135

 Score =  159 bits (403), Expect = 3e-37
 Identities = 74/76 (97%), Positives = 74/76 (97%)
 Frame = +3

Query: 3   LDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNFQTGYIDYDRLEEKALDFRPKLII 182
           LDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVN QTGYIDYDRLEEKALDFRPKLII
Sbjct: 45  LDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSQTGYIDYDRLEEKALDFRPKLII 104

Query: 183 CGGSAYPRDWDYARFR 230
           CGGSAYPRDWDY RFR
Sbjct: 105 CGGSAYPRDWDYKRFR 120


>gb|AFR41370.1| serine hydroxymethyltransferase, partial [Populus alba]
          Length = 138

 Score =  159 bits (403), Expect = 3e-37
 Identities = 74/76 (97%), Positives = 74/76 (97%)
 Frame = +3

Query: 3   LDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNFQTGYIDYDRLEEKALDFRPKLII 182
           LDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVN QTGYIDYDRLEEKALDFRPKLII
Sbjct: 45  LDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSQTGYIDYDRLEEKALDFRPKLII 104

Query: 183 CGGSAYPRDWDYARFR 230
           CGGSAYPRDWDY RFR
Sbjct: 105 CGGSAYPRDWDYKRFR 120


>gb|AFR41369.1| serine hydroxymethyltransferase, partial [Populus alba]
          Length = 133

 Score =  159 bits (403), Expect = 3e-37
 Identities = 74/76 (97%), Positives = 74/76 (97%)
 Frame = +3

Query: 3   LDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNFQTGYIDYDRLEEKALDFRPKLII 182
           LDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVN QTGYIDYDRLEEKALDFRPKLII
Sbjct: 45  LDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSQTGYIDYDRLEEKALDFRPKLII 104

Query: 183 CGGSAYPRDWDYARFR 230
           CGGSAYPRDWDY RFR
Sbjct: 105 CGGSAYPRDWDYKRFR 120


>gb|ABO61376.1| serine hydroxymethyltransferase [Populus tremuloides]
          Length = 471

 Score =  159 bits (403), Expect = 3e-37
 Identities = 74/76 (97%), Positives = 74/76 (97%)
 Frame = +3

Query: 3   LDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNFQTGYIDYDRLEEKALDFRPKLII 182
           LDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVN QTGYIDYDRLEEKALDFRPKLII
Sbjct: 127 LDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSQTGYIDYDRLEEKALDFRPKLII 186

Query: 183 CGGSAYPRDWDYARFR 230
           CGGSAYPRDWDY RFR
Sbjct: 187 CGGSAYPRDWDYKRFR 202


>ref|XP_006492539.1| PREDICTED: serine hydroxymethyltransferase 4-like [Citrus sinensis]
          Length = 471

 Score =  158 bits (400), Expect = 6e-37
 Identities = 73/76 (96%), Positives = 74/76 (97%)
 Frame = +3

Query: 3   LDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNFQTGYIDYDRLEEKALDFRPKLII 182
           LDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVN  TGYIDYD+LEEKALDFRPKLII
Sbjct: 127 LDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLII 186

Query: 183 CGGSAYPRDWDYARFR 230
           CGGSAYPRDWDYARFR
Sbjct: 187 CGGSAYPRDWDYARFR 202


>ref|XP_006421019.1| hypothetical protein CICLE_v10004902mg [Citrus clementina]
           gi|557522892|gb|ESR34259.1| hypothetical protein
           CICLE_v10004902mg [Citrus clementina]
          Length = 471

 Score =  158 bits (400), Expect = 6e-37
 Identities = 73/76 (96%), Positives = 74/76 (97%)
 Frame = +3

Query: 3   LDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNFQTGYIDYDRLEEKALDFRPKLII 182
           LDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVN  TGYIDYD+LEEKALDFRPKLII
Sbjct: 127 LDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLII 186

Query: 183 CGGSAYPRDWDYARFR 230
           CGGSAYPRDWDYARFR
Sbjct: 187 CGGSAYPRDWDYARFR 202


>gb|EOY05145.1| Serine hydroxymethyltransferase 4 isoform 2 [Theobroma cacao]
          Length = 412

 Score =  158 bits (400), Expect = 6e-37
 Identities = 73/76 (96%), Positives = 74/76 (97%)
 Frame = +3

Query: 3   LDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNFQTGYIDYDRLEEKALDFRPKLII 182
           LDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVN  TGYIDYD+LEEKALDFRPKLII
Sbjct: 65  LDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLII 124

Query: 183 CGGSAYPRDWDYARFR 230
           CGGSAYPRDWDYARFR
Sbjct: 125 CGGSAYPRDWDYARFR 140


>gb|EOY05144.1| Serine hydroxymethyltransferase 4 isoform 1 [Theobroma cacao]
          Length = 471

 Score =  158 bits (400), Expect = 6e-37
 Identities = 73/76 (96%), Positives = 74/76 (97%)
 Frame = +3

Query: 3   LDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNFQTGYIDYDRLEEKALDFRPKLII 182
           LDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVN  TGYIDYD+LEEKALDFRPKLII
Sbjct: 127 LDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLII 186

Query: 183 CGGSAYPRDWDYARFR 230
           CGGSAYPRDWDYARFR
Sbjct: 187 CGGSAYPRDWDYARFR 202


>gb|AAM64493.1| hydroxymethyltransferase [Arabidopsis thaliana]
          Length = 471

 Score =  158 bits (400), Expect = 6e-37
 Identities = 72/76 (94%), Positives = 74/76 (97%)
 Frame = +3

Query: 3   LDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNFQTGYIDYDRLEEKALDFRPKLII 182
           LDLPSGGHLTHGYYTSGGKK SATSIYFESLPYKVNF TGYIDYD+LEEKALDFRPKL+I
Sbjct: 127 LDLPSGGHLTHGYYTSGGKKTSATSIYFESLPYKVNFTTGYIDYDKLEEKALDFRPKLLI 186

Query: 183 CGGSAYPRDWDYARFR 230
           CGGSAYPRDWDYARFR
Sbjct: 187 CGGSAYPRDWDYARFR 202


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