BLASTX nr result

ID: Rheum21_contig00022233 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00022233
         (318 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003574549.1| PREDICTED: myb-related protein 306-like [Bra...    56   4e-06
gb|AAZ83352.1| myb transcription factor MYB30 [Gossypium hirsutum]     55   9e-06

>ref|XP_003574549.1| PREDICTED: myb-related protein 306-like [Brachypodium distachyon]
          Length = 303

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 43/126 (34%), Positives = 59/126 (46%), Gaps = 20/126 (15%)
 Frame = +1

Query: 1   VQTDINLAKKALMDALSVDT------KVGP---TTXXXXXXXXXENIARLLEGWGTSPEK 153
           +QTDI+ A++AL DALS+DT      K  P   ++         ENIARLLEGW    E 
Sbjct: 153 LQTDIHTARQALRDALSLDTTAPAPPKPAPMERSSKGAVYASSAENIARLLEGWMRPGEG 212

Query: 154 RVKKETFG-------SVFGFESFDSSNSGNLSPEEGSVVQGESRAE----CEGTLCSIEK 300
           +      G       SV   E   +S+SG     EGS V  +++ E           +E 
Sbjct: 213 KASSGGSGSGSRSSASVVSAEGASASHSGTAPTPEGSTVTSKTKDEVAVAAPPAFSMLEN 272

Query: 301 WLFEEG 318
           WLF++G
Sbjct: 273 WLFDDG 278


>gb|AAZ83352.1| myb transcription factor MYB30 [Gossypium hirsutum]
          Length = 307

 Score = 55.1 bits (131), Expect = 9e-06
 Identities = 49/143 (34%), Positives = 64/143 (44%), Gaps = 37/143 (25%)
 Frame = +1

Query: 1   VQTDINLAKKALMDALSVD-----TKVGPTT------XXXXXXXXXENIARLLEGW---- 135
           +QTDI++AKK L DALS +      ++ P                 ENIA+LL+GW    
Sbjct: 148 LQTDIHMAKKDLSDALSPEKSSDLVEMKPFNDHTSYPKPSGYASSTENIAKLLKGWMRNN 207

Query: 136 -------------GTSPEKRVKK-----ETFGSVFGFESFDSSNSG---NLSPEEG-SVV 249
                        GT P K  K      E F S  GFES DSS S    ++SPE   S  
Sbjct: 208 PWKMADSADYSEEGTVPMKEDKNSKEMAEAFQSHLGFESLDSSLSDISPSMSPETSLSQY 267

Query: 250 QGESRAECEGTLCSIEKWLFEEG 318
           + +     +  L  +EKWLF+EG
Sbjct: 268 ESKPHLNAQSQLSLLEKWLFDEG 290


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