BLASTX nr result
ID: Rheum21_contig00022189
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00022189
(466 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI35443.3| unnamed protein product [Vitis vinifera] 86 5e-15
ref|XP_002263595.1| PREDICTED: DNA polymerase V-like [Vitis vini... 86 5e-15
ref|XP_002518323.1| DNA binding protein, putative [Ricinus commu... 86 5e-15
emb|CAN80013.1| hypothetical protein VITISV_030078 [Vitis vinifera] 86 5e-15
ref|XP_003593314.1| DNA polymerase V [Medicago truncatula] gi|35... 80 3e-13
ref|XP_002864901.1| DNA polymerase V family [Arabidopsis lyrata ... 80 3e-13
gb|ABN05723.1| DNA polymerase V [Medicago truncatula] 80 3e-13
ref|XP_006394155.1| hypothetical protein EUTSA_v10003522mg [Eutr... 79 5e-13
ref|XP_002300310.2| hypothetical protein POPTR_0001s29220g [Popu... 79 8e-13
ref|XP_006279898.1| hypothetical protein CARUB_v10025747mg [Caps... 79 8e-13
gb|EXC33021.1| DNA polymerase V [Morus notabilis] 76 4e-12
ref|XP_002313953.2| hypothetical protein POPTR_0009s08340g [Popu... 75 7e-12
ref|XP_003543126.1| PREDICTED: DNA polymerase V-like isoform 1 [... 75 7e-12
ref|NP_201247.1| DNA polymerase V family protein [Arabidopsis th... 75 7e-12
ref|XP_006486780.1| PREDICTED: DNA polymerase V-like isoform X1 ... 74 2e-11
ref|XP_006422655.1| hypothetical protein CICLE_v10027696mg [Citr... 74 2e-11
ref|XP_004292138.1| PREDICTED: DNA polymerase V-like [Fragaria v... 74 2e-11
ref|XP_003547107.1| PREDICTED: DNA polymerase V-like [Glycine max] 74 3e-11
ref|XP_004485631.1| PREDICTED: DNA polymerase V-like [Cicer arie... 72 8e-11
gb|EOX98606.1| DNA polymerase phi subunit [Theobroma cacao] 69 6e-10
>emb|CBI35443.3| unnamed protein product [Vitis vinifera]
Length = 1237
Score = 85.9 bits (211), Expect = 5e-15
Identities = 41/83 (49%), Positives = 59/83 (71%)
Frame = +2
Query: 80 IRLMKTQKKILKTHLAQISDLVKILVKNMPEKQAKRAAVCKFCNKILQIVSSHVMAKTFL 259
++ + KK+LK+HL ++ L+K+LV NMPEKQA+R V KFC K+ Q++S+ + K+FL
Sbjct: 1151 VKGQEASKKMLKSHLPKLGLLIKVLVTNMPEKQARRTHVRKFCGKVFQMISTSNLTKSFL 1210
Query: 260 KTRDKESQKACEA*LGEAFLALK 328
K ++ ACE LGEAFLALK
Sbjct: 1211 KDLPPDAHVACETHLGEAFLALK 1233
>ref|XP_002263595.1| PREDICTED: DNA polymerase V-like [Vitis vinifera]
Length = 1280
Score = 85.9 bits (211), Expect = 5e-15
Identities = 41/83 (49%), Positives = 59/83 (71%)
Frame = +2
Query: 80 IRLMKTQKKILKTHLAQISDLVKILVKNMPEKQAKRAAVCKFCNKILQIVSSHVMAKTFL 259
++ + KK+LK+HL ++ L+K+LV NMPEKQA+R V KFC K+ Q++S+ + K+FL
Sbjct: 1194 VKGQEASKKMLKSHLPKLGLLIKVLVTNMPEKQARRTHVRKFCGKVFQMISTSNLTKSFL 1253
Query: 260 KTRDKESQKACEA*LGEAFLALK 328
K ++ ACE LGEAFLALK
Sbjct: 1254 KDLPPDAHVACETHLGEAFLALK 1276
>ref|XP_002518323.1| DNA binding protein, putative [Ricinus communis]
gi|223542543|gb|EEF44083.1| DNA binding protein, putative
[Ricinus communis]
Length = 1229
Score = 85.9 bits (211), Expect = 5e-15
Identities = 46/76 (60%), Positives = 56/76 (73%)
Frame = +2
Query: 101 KKILKTHLAQISDLVKILVKNMPEKQAKRAAVCKFCNKILQIVSSHVMAKTFLKTRDKES 280
KKILK HL ++S LVK LV NMPE +++RA V KFC KI QI+S+H AK+FLK E+
Sbjct: 1146 KKILKPHLQKLSYLVKELVMNMPENKSRRAEVRKFCIKIFQIMSTHDTAKSFLKDLTPET 1205
Query: 281 QKACEA*LGEAFLALK 328
Q ACE+ LGE FL LK
Sbjct: 1206 QAACESQLGELFLNLK 1221
>emb|CAN80013.1| hypothetical protein VITISV_030078 [Vitis vinifera]
Length = 1395
Score = 85.9 bits (211), Expect = 5e-15
Identities = 41/83 (49%), Positives = 59/83 (71%)
Frame = +2
Query: 80 IRLMKTQKKILKTHLAQISDLVKILVKNMPEKQAKRAAVCKFCNKILQIVSSHVMAKTFL 259
++ + KK+LK+HL ++ L+K+LV NMPEKQA+R V KFC K+ Q++S+ + K+FL
Sbjct: 1309 VKGQEASKKMLKSHLPKLGLLIKVLVTNMPEKQARRTHVRKFCGKVFQMISTSNLTKSFL 1368
Query: 260 KTRDKESQKACEA*LGEAFLALK 328
K ++ ACE LGEAFLALK
Sbjct: 1369 KDLPPDAHVACETHLGEAFLALK 1391
>ref|XP_003593314.1| DNA polymerase V [Medicago truncatula] gi|355482362|gb|AES63565.1|
DNA polymerase V [Medicago truncatula]
Length = 1258
Score = 80.1 bits (196), Expect = 3e-13
Identities = 47/107 (43%), Positives = 66/107 (61%), Gaps = 8/107 (7%)
Frame = +2
Query: 32 KSDIQLTTLVSLLEKNIRLMKTQ--------KKILKTHLAQISDLVKILVKNMPEKQAKR 187
KSD + + L+ + ++ + T+ KKI+K++L +IS +K LV NMP KQA+R
Sbjct: 1148 KSDFRRVEALELVMEILKSLATESGEGKNSSKKIVKSNLDKISHAMKELVTNMPSKQARR 1207
Query: 188 AAVCKFCNKILQIVSSHVMAKTFLKTRDKESQKACEA*LGEAFLALK 328
A V KFC K+ +I+S H + K LKT E+Q A EA LGE FL LK
Sbjct: 1208 AEVRKFCVKVFEILSKHSLTKYLLKTLAPEAQAALEAQLGEKFLCLK 1254
>ref|XP_002864901.1| DNA polymerase V family [Arabidopsis lyrata subsp. lyrata]
gi|297310736|gb|EFH41160.1| DNA polymerase V family
[Arabidopsis lyrata subsp. lyrata]
Length = 1301
Score = 80.1 bits (196), Expect = 3e-13
Identities = 44/99 (44%), Positives = 60/99 (60%)
Frame = +2
Query: 38 DIQLTTLVSLLEKNIRLMKTQKKILKTHLAQISDLVKILVKNMPEKQAKRAAVCKFCNKI 217
D+ TL SL+ N + KK +KTHL ++ L+K LV NMPE + +RA V KFC +I
Sbjct: 1201 DLITETLRSLVPINENTQEDSKKTMKTHLKKLIHLIKELVANMPEAKVRRAQVRKFCGRI 1260
Query: 218 LQIVSSHVMAKTFLKTRDKESQKACEA*LGEAFLALKMT 334
Q+VSS + + LK + Q ACE+ LG+ FL LK T
Sbjct: 1261 FQMVSSLKLTNSLLKGLGPDGQSACESALGDLFLNLKNT 1299
>gb|ABN05723.1| DNA polymerase V [Medicago truncatula]
Length = 1268
Score = 80.1 bits (196), Expect = 3e-13
Identities = 47/107 (43%), Positives = 66/107 (61%), Gaps = 8/107 (7%)
Frame = +2
Query: 32 KSDIQLTTLVSLLEKNIRLMKTQ--------KKILKTHLAQISDLVKILVKNMPEKQAKR 187
KSD + + L+ + ++ + T+ KKI+K++L +IS +K LV NMP KQA+R
Sbjct: 1158 KSDFRRVEALELVMEILKSLATESGEGKNSSKKIVKSNLDKISHAMKELVTNMPSKQARR 1217
Query: 188 AAVCKFCNKILQIVSSHVMAKTFLKTRDKESQKACEA*LGEAFLALK 328
A V KFC K+ +I+S H + K LKT E+Q A EA LGE FL LK
Sbjct: 1218 AEVRKFCVKVFEILSKHSLTKYLLKTLAPEAQAALEAQLGEKFLCLK 1264
>ref|XP_006394155.1| hypothetical protein EUTSA_v10003522mg [Eutrema salsugineum]
gi|557090794|gb|ESQ31441.1| hypothetical protein
EUTSA_v10003522mg [Eutrema salsugineum]
Length = 1302
Score = 79.3 bits (194), Expect = 5e-13
Identities = 48/101 (47%), Positives = 61/101 (60%), Gaps = 2/101 (1%)
Frame = +2
Query: 38 DIQLTTLVSLLEKNIRLMKTQKKILKTHLAQISDLVKILVKNMPE--KQAKRAAVCKFCN 211
D+ TL SL+ + + KK +KTHL ++S L+K LV MPE KQAKRA V K C
Sbjct: 1200 DLITETLRSLVPISEETQEDSKKTMKTHLKKLSHLIKELVAKMPEEKKQAKRAKVRKSCG 1259
Query: 212 KILQIVSSHVMAKTFLKTRDKESQKACEA*LGEAFLALKMT 334
KI ++VSS + K+ LK E Q ACE LG+ FL LK T
Sbjct: 1260 KIFRMVSSLKLTKSLLKALGPEGQTACETALGDLFLNLKNT 1300
>ref|XP_002300310.2| hypothetical protein POPTR_0001s29220g [Populus trichocarpa]
gi|550348455|gb|EEE85115.2| hypothetical protein
POPTR_0001s29220g [Populus trichocarpa]
Length = 1283
Score = 78.6 bits (192), Expect = 8e-13
Identities = 39/76 (51%), Positives = 53/76 (69%)
Frame = +2
Query: 101 KKILKTHLAQISDLVKILVKNMPEKQAKRAAVCKFCNKILQIVSSHVMAKTFLKTRDKES 280
KKILK HL ++S L+K LV MPEKQ++RA V KFC K+ + VS++ + K FLK E+
Sbjct: 1204 KKILKNHLQKLSHLIKELVTKMPEKQSRRAEVRKFCGKVFRYVSTYDLTKCFLKYLGPEA 1263
Query: 281 QKACEA*LGEAFLALK 328
+ ACE+ LGE +L K
Sbjct: 1264 EAACESQLGELYLNFK 1279
>ref|XP_006279898.1| hypothetical protein CARUB_v10025747mg [Capsella rubella]
gi|482548602|gb|EOA12796.1| hypothetical protein
CARUB_v10025747mg [Capsella rubella]
Length = 1306
Score = 78.6 bits (192), Expect = 8e-13
Identities = 43/94 (45%), Positives = 59/94 (62%)
Frame = +2
Query: 53 TLVSLLEKNIRLMKTQKKILKTHLAQISDLVKILVKNMPEKQAKRAAVCKFCNKILQIVS 232
TL SL+ N + KK +KTHL ++S L+K LV +PE +A+RA V KFC +I Q+VS
Sbjct: 1211 TLRSLVPINENTQEGSKKTMKTHLKKLSHLIKELVAKIPENKARRAQVRKFCGRIFQMVS 1270
Query: 233 SHVMAKTFLKTRDKESQKACEA*LGEAFLALKMT 334
S + + LK + Q ACE+ LG+ FL LK T
Sbjct: 1271 SLKLTNSLLKGLGPDGQTACESALGDLFLNLKNT 1304
>gb|EXC33021.1| DNA polymerase V [Morus notabilis]
Length = 1269
Score = 76.3 bits (186), Expect = 4e-12
Identities = 38/76 (50%), Positives = 54/76 (71%)
Frame = +2
Query: 101 KKILKTHLAQISDLVKILVKNMPEKQAKRAAVCKFCNKILQIVSSHVMAKTFLKTRDKES 280
K+ILK+HL+++ L+++LV N EKQ++RA V KFC KI Q VS+ +AK FLK+ D+
Sbjct: 1191 KEILKSHLSKLCHLIEVLVTNKAEKQSRRAEVRKFCGKIFQTVSTVKLAKAFLKSLDQNV 1250
Query: 281 QKACEA*LGEAFLALK 328
CE+ LG+ FL LK
Sbjct: 1251 HVLCESQLGDQFLNLK 1266
>ref|XP_002313953.2| hypothetical protein POPTR_0009s08340g [Populus trichocarpa]
gi|550331298|gb|EEE87908.2| hypothetical protein
POPTR_0009s08340g [Populus trichocarpa]
Length = 1298
Score = 75.5 bits (184), Expect = 7e-12
Identities = 36/76 (47%), Positives = 52/76 (68%)
Frame = +2
Query: 101 KKILKTHLAQISDLVKILVKNMPEKQAKRAAVCKFCNKILQIVSSHVMAKTFLKTRDKES 280
KK+LK HL ++S L+K L NMPEK ++RA KFC K+ + VS++ + K+FLK E+
Sbjct: 1219 KKVLKNHLQKLSHLIKELATNMPEKPSRRAEARKFCGKVFRYVSTYDLTKSFLKYLAPEA 1278
Query: 281 QKACEA*LGEAFLALK 328
+ ACE+ LGE +L K
Sbjct: 1279 EAACESQLGELYLNFK 1294
>ref|XP_003543126.1| PREDICTED: DNA polymerase V-like isoform 1 [Glycine max]
Length = 1250
Score = 75.5 bits (184), Expect = 7e-12
Identities = 42/97 (43%), Positives = 57/97 (58%)
Frame = +2
Query: 38 DIQLTTLVSLLEKNIRLMKTQKKILKTHLAQISDLVKILVKNMPEKQAKRAAVCKFCNKI 217
++ + L SL N KKILK ++S L+K LV NMP K A+R V KFC K
Sbjct: 1150 ELVMEILKSLTSGNNDEQNASKKILKNSFDKLSRLMKELVTNMPSKPARRTEVLKFCVKA 1209
Query: 218 LQIVSSHVMAKTFLKTRDKESQKACEA*LGEAFLALK 328
L+I+S H + K F+KT ++Q A E LGE F++LK
Sbjct: 1210 LEILSKHNLTKNFVKTLAPDTQAALEVQLGEQFISLK 1246
>ref|NP_201247.1| DNA polymerase V family protein [Arabidopsis thaliana]
gi|10178223|dbj|BAB11603.1| unnamed protein product
[Arabidopsis thaliana] gi|332010508|gb|AED97891.1| DNA
polymerase phi subunit [Arabidopsis thaliana]
Length = 1306
Score = 75.5 bits (184), Expect = 7e-12
Identities = 42/99 (42%), Positives = 59/99 (59%)
Frame = +2
Query: 38 DIQLTTLVSLLEKNIRLMKTQKKILKTHLAQISDLVKILVKNMPEKQAKRAAVCKFCNKI 217
D+ TL SL+ N +K + THL ++ L+K LV NMPE + +RA V KFC +I
Sbjct: 1206 DLITETLRSLIPINENTQADSRKTMTTHLKELILLIKELVGNMPEAKVRRAQVRKFCGRI 1265
Query: 218 LQIVSSHVMAKTFLKTRDKESQKACEA*LGEAFLALKMT 334
Q+VSS + K+FLK ++ + ACE G+ FL LK T
Sbjct: 1266 FQMVSSLKLTKSFLKGLGQDGRTACEDAFGDLFLNLKNT 1304
>ref|XP_006486780.1| PREDICTED: DNA polymerase V-like isoform X1 [Citrus sinensis]
gi|568866893|ref|XP_006486781.1| PREDICTED: DNA
polymerase V-like isoform X2 [Citrus sinensis]
Length = 1294
Score = 74.3 bits (181), Expect = 2e-11
Identities = 42/99 (42%), Positives = 61/99 (61%), Gaps = 2/99 (2%)
Frame = +2
Query: 38 DIQLTTLVSL--LEKNIRLMKTQKKILKTHLAQISDLVKILVKNMPEKQAKRAAVCKFCN 211
D+ + L SL L + K+ LK+HL +S ++K LV NMPEKQ++RA V KFC
Sbjct: 1193 DLVMEILKSLVPLSSDEATRDASKRKLKSHLRNLSHVIKQLVTNMPEKQSRRAEVRKFCA 1252
Query: 212 KILQIVSSHVMAKTFLKTRDKESQKACEA*LGEAFLALK 328
K+ Q++S+ + K FLK ++ ACE+ LG+ FL LK
Sbjct: 1253 KMFQMLSTLNLTKPFLKDLPSDAHAACESQLGDMFLNLK 1291
>ref|XP_006422655.1| hypothetical protein CICLE_v10027696mg [Citrus clementina]
gi|557524589|gb|ESR35895.1| hypothetical protein
CICLE_v10027696mg [Citrus clementina]
Length = 1222
Score = 74.3 bits (181), Expect = 2e-11
Identities = 42/99 (42%), Positives = 61/99 (61%), Gaps = 2/99 (2%)
Frame = +2
Query: 38 DIQLTTLVSL--LEKNIRLMKTQKKILKTHLAQISDLVKILVKNMPEKQAKRAAVCKFCN 211
D+ + L SL L + K+ LK+HL +S ++K LV NMPEKQ++RA V KFC
Sbjct: 1121 DLVMEILKSLVPLSSDEATRDASKRKLKSHLRNLSHVIKQLVTNMPEKQSRRAEVRKFCA 1180
Query: 212 KILQIVSSHVMAKTFLKTRDKESQKACEA*LGEAFLALK 328
K+ Q++S+ + K FLK ++ ACE+ LG+ FL LK
Sbjct: 1181 KMFQMLSTLNLTKPFLKDLPSDAHAACESQLGDMFLNLK 1219
>ref|XP_004292138.1| PREDICTED: DNA polymerase V-like [Fragaria vesca subsp. vesca]
Length = 1254
Score = 74.3 bits (181), Expect = 2e-11
Identities = 35/79 (44%), Positives = 56/79 (70%)
Frame = +2
Query: 92 KTQKKILKTHLAQISDLVKILVKNMPEKQAKRAAVCKFCNKILQIVSSHVMAKTFLKTRD 271
+T KKI+K+HL ++ L++ L+ NMPEKQ++RA V KFC KI Q++++ ++K+FLK
Sbjct: 1170 ETLKKIMKSHLEKLCQLIEQLLTNMPEKQSRRAEVRKFCGKIFQMIATLKLSKSFLKNLA 1229
Query: 272 KESQKACEA*LGEAFLALK 328
++ CE+ LG+ F LK
Sbjct: 1230 PDAHAKCESQLGDQFKNLK 1248
>ref|XP_003547107.1| PREDICTED: DNA polymerase V-like [Glycine max]
Length = 1262
Score = 73.6 bits (179), Expect = 3e-11
Identities = 43/97 (44%), Positives = 58/97 (59%)
Frame = +2
Query: 38 DIQLTTLVSLLEKNIRLMKTQKKILKTHLAQISDLVKILVKNMPEKQAKRAAVCKFCNKI 217
++ + L SL N KKILK L ++S L+K LV NMP K A+R V KFC K
Sbjct: 1162 ELVMEILKSLSTGNSDEQNASKKILKNSLDKLSHLLKELVTNMPSKPARRTEVQKFCVKA 1221
Query: 218 LQIVSSHVMAKTFLKTRDKESQKACEA*LGEAFLALK 328
L+I+S + K F+KT ++Q A EA LGE F++LK
Sbjct: 1222 LEILSKLNLTKNFVKTLAPDTQAALEAQLGEQFISLK 1258
>ref|XP_004485631.1| PREDICTED: DNA polymerase V-like [Cicer arietinum]
Length = 1257
Score = 72.0 bits (175), Expect = 8e-11
Identities = 40/107 (37%), Positives = 65/107 (60%), Gaps = 8/107 (7%)
Frame = +2
Query: 32 KSDIQLTTLVSLLEKNIRLMKTQ--------KKILKTHLAQISDLVKILVKNMPEKQAKR 187
KSD + + L+ + ++ + T KKI+K +L ++S ++K LV NMP K A++
Sbjct: 1147 KSDFRRVKALDLVMEILKTLATGSGEGQNPLKKIVKNNLDKLSHVMKELVTNMPSKPARK 1206
Query: 188 AAVCKFCNKILQIVSSHVMAKTFLKTRDKESQKACEA*LGEAFLALK 328
V KFC K+ +I+S H + K LKT + ++Q A EA LG+ F++LK
Sbjct: 1207 TEVHKFCVKVFEILSKHKLTKYLLKTLEPDTQAALEAQLGDKFVSLK 1253
>gb|EOX98606.1| DNA polymerase phi subunit [Theobroma cacao]
Length = 1278
Score = 68.9 bits (167), Expect = 6e-10
Identities = 33/76 (43%), Positives = 52/76 (68%)
Frame = +2
Query: 101 KKILKTHLAQISDLVKILVKNMPEKQAKRAAVCKFCNKILQIVSSHVMAKTFLKTRDKES 280
KKILK+HL +S L++ LV MPEK+ ++ V KFC+KI Q++S+ + + FL+ ++
Sbjct: 1200 KKILKSHLQSLSHLIERLVTRMPEKKLRKTEVHKFCDKIFQMISTLDLTEAFLRCLGPDA 1259
Query: 281 QKACEA*LGEAFLALK 328
+ +CE+ LG FL LK
Sbjct: 1260 RPSCESQLGPLFLKLK 1275