BLASTX nr result
ID: Rheum21_contig00021960
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00021960
(462 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002277599.2| PREDICTED: cytochrome c6, chloroplastic isof... 108 1e-21
ref|XP_002865286.1| electron transporter protein [Arabidopsis ly... 108 1e-21
ref|XP_003631239.1| PREDICTED: cytochrome c6, chloroplastic isof... 108 1e-21
ref|XP_004958058.1| PREDICTED: cytochrome c6, chloroplastic-like... 106 4e-21
emb|CAN61634.1| hypothetical protein VITISV_008455 [Vitis vinifera] 105 5e-21
gb|EOY27551.1| Cytochrome c [Theobroma cacao] 105 8e-21
ref|XP_002463042.1| hypothetical protein SORBIDRAFT_02g036670 [S... 105 8e-21
ref|NP_001168633.1| cytochrome c6 [Zea mays] gi|223949699|gb|ACN... 105 8e-21
gb|ACG37082.1| cytochrome c6 [Zea mays] 105 8e-21
gb|EMT19430.1| Cytochrome c6, chloroplastic [Aegilops tauschii] 104 1e-20
ref|XP_004166980.1| PREDICTED: cytochrome c6, chloroplastic-like... 104 1e-20
ref|XP_004134523.1| PREDICTED: cytochrome c6, chloroplastic-like... 104 1e-20
ref|XP_003607878.1| Cytochrome c6 [Medicago truncatula] gi|12435... 103 2e-20
gb|EMJ13429.1| hypothetical protein PRUPE_ppa013384mg [Prunus pe... 103 3e-20
gb|EAZ04378.1| hypothetical protein OsI_26520 [Oryza sativa Indi... 103 3e-20
ref|XP_006582859.1| PREDICTED: uncharacterized protein LOC100500... 102 5e-20
ref|XP_003560070.1| PREDICTED: cytochrome c6, chloroplastic-like... 102 5e-20
ref|XP_002863535.1| cytochrome c6 [Arabidopsis lyrata subsp. lyr... 102 5e-20
ref|NP_001238380.1| uncharacterized protein LOC100500456 [Glycin... 102 5e-20
ref|XP_006468459.1| PREDICTED: cytochrome c6, chloroplastic-like... 102 7e-20
>ref|XP_002277599.2| PREDICTED: cytochrome c6, chloroplastic isoform 1 [Vitis vinifera]
Length = 167
Score = 108 bits (269), Expect = 1e-21
Identities = 53/87 (60%), Positives = 64/87 (73%)
Frame = -1
Query: 261 AQQLVATVLAFSLLLCSAANGQEDGVRSRGGALFGQACIGCHDAGGNVIQPGSTLFAGDL 82
A L+A V+A S + + + + RG ALFG+ACIGCHDAGGN+IQPG+TLF DL
Sbjct: 39 APPLMAAVVALSPICNTPVSLAQTTDIQRGAALFGRACIGCHDAGGNIIQPGATLFLKDL 98
Query: 81 ERNGVATEEEIYEITCSGKGRMPGFGE 1
+RNGV TEEEIY +T GKGRMPGFGE
Sbjct: 99 QRNGVDTEEEIYRVTYYGKGRMPGFGE 125
>ref|XP_002865286.1| electron transporter protein [Arabidopsis lyrata subsp. lyrata]
gi|297311121|gb|EFH41545.1| electron transporter protein
[Arabidopsis lyrata subsp. lyrata]
Length = 176
Score = 108 bits (269), Expect = 1e-21
Identities = 55/89 (61%), Positives = 64/89 (71%), Gaps = 2/89 (2%)
Frame = -1
Query: 261 AQQLVATVLAFSLLLCSAAN--GQEDGVRSRGGALFGQACIGCHDAGGNVIQPGSTLFAG 88
AQ L A +LA S ++C GQ ++ RG LF +ACIGCHD GGN+IQPG+TLF
Sbjct: 49 AQPLTAVLLAVSPIICFPPESLGQTLDIQ-RGATLFNRACIGCHDTGGNIIQPGATLFTK 107
Query: 87 DLERNGVATEEEIYEITCSGKGRMPGFGE 1
DLERNGV TEEEIY +T GKGRMPGFGE
Sbjct: 108 DLERNGVDTEEEIYRVTYFGKGRMPGFGE 136
>ref|XP_003631239.1| PREDICTED: cytochrome c6, chloroplastic isoform 2 [Vitis vinifera]
gi|297737964|emb|CBI27165.3| unnamed protein product
[Vitis vinifera]
Length = 173
Score = 108 bits (269), Expect = 1e-21
Identities = 53/87 (60%), Positives = 64/87 (73%)
Frame = -1
Query: 261 AQQLVATVLAFSLLLCSAANGQEDGVRSRGGALFGQACIGCHDAGGNVIQPGSTLFAGDL 82
A L+A V+A S + + + + RG ALFG+ACIGCHDAGGN+IQPG+TLF DL
Sbjct: 45 APPLMAAVVALSPICNTPVSLAQTTDIQRGAALFGRACIGCHDAGGNIIQPGATLFLKDL 104
Query: 81 ERNGVATEEEIYEITCSGKGRMPGFGE 1
+RNGV TEEEIY +T GKGRMPGFGE
Sbjct: 105 QRNGVDTEEEIYRVTYYGKGRMPGFGE 131
>ref|XP_004958058.1| PREDICTED: cytochrome c6, chloroplastic-like [Setaria italica]
Length = 186
Score = 106 bits (264), Expect = 4e-21
Identities = 56/106 (52%), Positives = 69/106 (65%), Gaps = 7/106 (6%)
Frame = -1
Query: 297 EESRDSNGAVLTAQQLVATVLAFSLLLCSAANGQEDGVR-------SRGGALFGQACIGC 139
+++R S A + A +LA +LLL +A G + S G ALF +ACIGC
Sbjct: 39 KQARPSAVAAAVTGRAAAPLLAAALLLAAAPYGLPATIPPAFAQPVSEGAALFRKACIGC 98
Query: 138 HDAGGNVIQPGSTLFAGDLERNGVATEEEIYEITCSGKGRMPGFGE 1
HD GGN++QPG+TLF DLERNGV TEEE+Y IT GKGRMPGFGE
Sbjct: 99 HDMGGNILQPGATLFLKDLERNGVVTEEELYNITYYGKGRMPGFGE 144
>emb|CAN61634.1| hypothetical protein VITISV_008455 [Vitis vinifera]
Length = 125
Score = 105 bits (263), Expect = 5e-21
Identities = 51/83 (61%), Positives = 62/83 (74%)
Frame = -1
Query: 249 VATVLAFSLLLCSAANGQEDGVRSRGGALFGQACIGCHDAGGNVIQPGSTLFAGDLERNG 70
+A V+A S + + + + RG ALFG+ACIGCHDAGGN+IQPG+TLF DL+RNG
Sbjct: 1 MAAVVALSPICNTPVSLAQTTDIQRGAALFGRACIGCHDAGGNIIQPGATLFLKDLQRNG 60
Query: 69 VATEEEIYEITCSGKGRMPGFGE 1
V TEEEIY +T GKGRMPGFGE
Sbjct: 61 VDTEEEIYRVTYYGKGRMPGFGE 83
>gb|EOY27551.1| Cytochrome c [Theobroma cacao]
Length = 172
Score = 105 bits (261), Expect = 8e-21
Identities = 52/87 (59%), Positives = 62/87 (71%)
Frame = -1
Query: 261 AQQLVATVLAFSLLLCSAANGQEDGVRSRGGALFGQACIGCHDAGGNVIQPGSTLFAGDL 82
A L+A +A S + + A Q ++ RG LF QACIGCHD GGN+IQPG+TLF DL
Sbjct: 45 APPLIAAFVALSPICSTPALAQTVDIQ-RGATLFRQACIGCHDGGGNIIQPGATLFTKDL 103
Query: 81 ERNGVATEEEIYEITCSGKGRMPGFGE 1
+RNGV TEEEIY +T GKGRMPGFGE
Sbjct: 104 QRNGVDTEEEIYRVTYFGKGRMPGFGE 130
>ref|XP_002463042.1| hypothetical protein SORBIDRAFT_02g036670 [Sorghum bicolor]
gi|241926419|gb|EER99563.1| hypothetical protein
SORBIDRAFT_02g036670 [Sorghum bicolor]
Length = 190
Score = 105 bits (261), Expect = 8e-21
Identities = 54/89 (60%), Positives = 63/89 (70%), Gaps = 7/89 (7%)
Frame = -1
Query: 246 ATVLAFSLLLCSAANGQEDGVR-------SRGGALFGQACIGCHDAGGNVIQPGSTLFAG 88
A +LA +LLL +A G + S G ALF +ACIGCHD GGN++QPG+TLF
Sbjct: 60 APLLAAALLLVAAPLGLPAAISPAFAQPVSEGAALFRKACIGCHDMGGNILQPGATLFLK 119
Query: 87 DLERNGVATEEEIYEITCSGKGRMPGFGE 1
DLERNGVATEEE+Y IT GKGRMPGFGE
Sbjct: 120 DLERNGVATEEELYNITYYGKGRMPGFGE 148
>ref|NP_001168633.1| cytochrome c6 [Zea mays] gi|223949699|gb|ACN28933.1| unknown [Zea
mays] gi|414887165|tpg|DAA63179.1| TPA: cytochrome c6
[Zea mays]
Length = 185
Score = 105 bits (261), Expect = 8e-21
Identities = 54/94 (57%), Positives = 65/94 (69%), Gaps = 7/94 (7%)
Frame = -1
Query: 261 AQQLVATVLAFSLLLCSAANGQEDGVR-------SRGGALFGQACIGCHDAGGNVIQPGS 103
A + A +LA +L+L +A G + S G ALF +ACIGCHD GGN++QPG+
Sbjct: 50 AARQAAPLLAAALVLVAAPPGLPAAISPAFAQPVSEGAALFRKACIGCHDMGGNILQPGA 109
Query: 102 TLFAGDLERNGVATEEEIYEITCSGKGRMPGFGE 1
TLF DLERNGVATEEE+Y IT GKGRMPGFGE
Sbjct: 110 TLFLKDLERNGVATEEELYNITYYGKGRMPGFGE 143
>gb|ACG37082.1| cytochrome c6 [Zea mays]
Length = 185
Score = 105 bits (261), Expect = 8e-21
Identities = 54/94 (57%), Positives = 65/94 (69%), Gaps = 7/94 (7%)
Frame = -1
Query: 261 AQQLVATVLAFSLLLCSAANGQEDGVR-------SRGGALFGQACIGCHDAGGNVIQPGS 103
A + A +LA +L+L +A G + S G ALF +ACIGCHD GGN++QPG+
Sbjct: 50 AARQAAPLLAAALVLVAAPPGLPAAISPAFAQPVSEGAALFRKACIGCHDMGGNILQPGA 109
Query: 102 TLFAGDLERNGVATEEEIYEITCSGKGRMPGFGE 1
TLF DLERNGVATEEE+Y IT GKGRMPGFGE
Sbjct: 110 TLFLKDLERNGVATEEELYNITYYGKGRMPGFGE 143
>gb|EMT19430.1| Cytochrome c6, chloroplastic [Aegilops tauschii]
Length = 176
Score = 104 bits (260), Expect = 1e-20
Identities = 56/99 (56%), Positives = 66/99 (66%), Gaps = 8/99 (8%)
Frame = -1
Query: 273 AVLTAQQLVATVLAFSLLLCSAANGQEDG--------VRSRGGALFGQACIGCHDAGGNV 118
AV + A +LA SLLL +AA +S+G ALF +ACIGCHD GGN+
Sbjct: 36 AVAARRCAAAPLLAASLLLAAAAASPGHSCPVLHPAFAQSQGAALFRKACIGCHDTGGNI 95
Query: 117 IQPGSTLFAGDLERNGVATEEEIYEITCSGKGRMPGFGE 1
+QPG+TL DLERNGVATEEEIY IT GKGRMPG+GE
Sbjct: 96 LQPGATLSMKDLERNGVATEEEIYNITYYGKGRMPGYGE 134
>ref|XP_004166980.1| PREDICTED: cytochrome c6, chloroplastic-like, partial [Cucumis
sativus]
Length = 146
Score = 104 bits (259), Expect = 1e-20
Identities = 46/59 (77%), Positives = 50/59 (84%)
Frame = -1
Query: 177 RGGALFGQACIGCHDAGGNVIQPGSTLFAGDLERNGVATEEEIYEITCSGKGRMPGFGE 1
RGGALF Q+CIGCHD GGN+IQPG+TLF+ DLERNG EEEIY IT GKGRMPGFGE
Sbjct: 51 RGGALFNQSCIGCHDGGGNIIQPGATLFSSDLERNGADAEEEIYRITYDGKGRMPGFGE 109
>ref|XP_004134523.1| PREDICTED: cytochrome c6, chloroplastic-like [Cucumis sativus]
Length = 170
Score = 104 bits (259), Expect = 1e-20
Identities = 46/59 (77%), Positives = 50/59 (84%)
Frame = -1
Query: 177 RGGALFGQACIGCHDAGGNVIQPGSTLFAGDLERNGVATEEEIYEITCSGKGRMPGFGE 1
RGGALF Q+CIGCHD GGN+IQPG+TLF+ DLERNG EEEIY IT GKGRMPGFGE
Sbjct: 75 RGGALFNQSCIGCHDGGGNIIQPGATLFSSDLERNGADAEEEIYRITYDGKGRMPGFGE 133
>ref|XP_003607878.1| Cytochrome c6 [Medicago truncatula] gi|124359658|gb|ABN06030.1|
Cytochrome c, monohaem [Medicago truncatula]
gi|355508933|gb|AES90075.1| Cytochrome c6 [Medicago
truncatula]
Length = 173
Score = 103 bits (258), Expect = 2e-20
Identities = 51/87 (58%), Positives = 59/87 (67%)
Frame = -1
Query: 261 AQQLVATVLAFSLLLCSAANGQEDGVRSRGGALFGQACIGCHDAGGNVIQPGSTLFAGDL 82
A L A L FS + + + + RG LF Q CIGCHDAGGN+IQPGSTLF DL
Sbjct: 45 APPLAAAFLLFSPICATPVSIAQTIDIQRGATLFSQTCIGCHDAGGNIIQPGSTLFTKDL 104
Query: 81 ERNGVATEEEIYEITCSGKGRMPGFGE 1
+RNGV TEEEIY +T GKGRMPGFG+
Sbjct: 105 QRNGVDTEEEIYRVTYYGKGRMPGFGK 131
>gb|EMJ13429.1| hypothetical protein PRUPE_ppa013384mg [Prunus persica]
Length = 126
Score = 103 bits (256), Expect = 3e-20
Identities = 49/84 (58%), Positives = 60/84 (71%)
Frame = -1
Query: 252 LVATVLAFSLLLCSAANGQEDGVRSRGGALFGQACIGCHDAGGNVIQPGSTLFAGDLERN 73
+ A VLA S + + + + +G ALF + CIGCHDAGGN+IQPG+TLF DL+RN
Sbjct: 1 MAAAVLALSPICITPVSDAQTLDVQKGAALFRKTCIGCHDAGGNIIQPGATLFTRDLQRN 60
Query: 72 GVATEEEIYEITCSGKGRMPGFGE 1
GV TEEEIY +T GKGRMPGFGE
Sbjct: 61 GVDTEEEIYRVTYFGKGRMPGFGE 84
>gb|EAZ04378.1| hypothetical protein OsI_26520 [Oryza sativa Indica Group]
gi|125600761|gb|EAZ40337.1| hypothetical protein
OsJ_24784 [Oryza sativa Japonica Group]
Length = 188
Score = 103 bits (256), Expect = 3e-20
Identities = 53/97 (54%), Positives = 66/97 (68%), Gaps = 6/97 (6%)
Frame = -1
Query: 273 AVLTAQQLVATVLAFSLLLCSAANG------QEDGVRSRGGALFGQACIGCHDAGGNVIQ 112
A A++ +LA + LL SAA+ +S G ALF +ACIGCHD GGN++Q
Sbjct: 50 ASAAAERAATPLLAAAALLLSAASPGFLASTPSAFAQSEGAALFRKACIGCHDMGGNILQ 109
Query: 111 PGSTLFAGDLERNGVATEEEIYEITCSGKGRMPGFGE 1
PG+TL+ DLERNGVATE+E+Y IT GKGRMPGFGE
Sbjct: 110 PGATLYMKDLERNGVATEDELYNITYYGKGRMPGFGE 146
>ref|XP_006582859.1| PREDICTED: uncharacterized protein LOC100500456 isoform X1 [Glycine
max]
Length = 172
Score = 102 bits (254), Expect = 5e-20
Identities = 51/87 (58%), Positives = 60/87 (68%)
Frame = -1
Query: 261 AQQLVATVLAFSLLLCSAANGQEDGVRSRGGALFGQACIGCHDAGGNVIQPGSTLFAGDL 82
A LVA L S + + + + RG LF QACIGCHDAGGN+IQPG+TLFA DL
Sbjct: 44 APPLVAAFLVLSPICSTPVSSAQTVDIQRGTTLFRQACIGCHDAGGNIIQPGATLFAKDL 103
Query: 81 ERNGVATEEEIYEITCSGKGRMPGFGE 1
+RNGV TEE IY +T GKGRMPGFG+
Sbjct: 104 QRNGVDTEEAIYGVTYYGKGRMPGFGK 130
>ref|XP_003560070.1| PREDICTED: cytochrome c6, chloroplastic-like [Brachypodium
distachyon]
Length = 178
Score = 102 bits (254), Expect = 5e-20
Identities = 58/106 (54%), Positives = 69/106 (65%), Gaps = 3/106 (2%)
Frame = -1
Query: 309 NNLEEESRDSNGAVLTAQQLVATVLAFSLLLCSA---ANGQEDGVRSRGGALFGQACIGC 139
N+L + +R A L A L+ A S + +A A Q G G ALF +ACIGC
Sbjct: 35 NSLADAARRCAAAPLLAASLLLGAAAASPGIPAATPPAIAQPGG----GAALFRKACIGC 90
Query: 138 HDAGGNVIQPGSTLFAGDLERNGVATEEEIYEITCSGKGRMPGFGE 1
HD GGN++QPG+TLF DLERNGVATEEEIY IT GKGRMPG+GE
Sbjct: 91 HDTGGNILQPGATLFMKDLERNGVATEEEIYNITYYGKGRMPGYGE 136
>ref|XP_002863535.1| cytochrome c6 [Arabidopsis lyrata subsp. lyrata]
gi|297309370|gb|EFH39794.1| cytochrome c6 [Arabidopsis
lyrata subsp. lyrata]
Length = 176
Score = 102 bits (254), Expect = 5e-20
Identities = 53/89 (59%), Positives = 62/89 (69%), Gaps = 2/89 (2%)
Frame = -1
Query: 261 AQQLVATVLAFSLLLCSAAN--GQEDGVRSRGGALFGQACIGCHDAGGNVIQPGSTLFAG 88
A L A +LA S ++C GQ ++ RG LF +ACIGCHD GGN+IQP +TLF
Sbjct: 49 APPLTAVLLAVSPIICFPPESLGQTLDIQ-RGATLFNRACIGCHDTGGNIIQPVATLFTK 107
Query: 87 DLERNGVATEEEIYEITCSGKGRMPGFGE 1
DLERNGV TEEEIY +T GKGRMPGFGE
Sbjct: 108 DLERNGVDTEEEIYRVTYFGKGRMPGFGE 136
>ref|NP_001238380.1| uncharacterized protein LOC100500456 [Glycine max]
gi|255630373|gb|ACU15543.1| unknown [Glycine max]
Length = 136
Score = 102 bits (254), Expect = 5e-20
Identities = 51/87 (58%), Positives = 60/87 (68%)
Frame = -1
Query: 261 AQQLVATVLAFSLLLCSAANGQEDGVRSRGGALFGQACIGCHDAGGNVIQPGSTLFAGDL 82
A LVA L S + + + + RG LF QACIGCHDAGGN+IQPG+TLFA DL
Sbjct: 44 APPLVAAFLVLSPICSTPVSSAQTVDIQRGTTLFRQACIGCHDAGGNIIQPGATLFAKDL 103
Query: 81 ERNGVATEEEIYEITCSGKGRMPGFGE 1
+RNGV TEE IY +T GKGRMPGFG+
Sbjct: 104 QRNGVDTEEAIYGVTYYGKGRMPGFGK 130
>ref|XP_006468459.1| PREDICTED: cytochrome c6, chloroplastic-like isoform X1 [Citrus
sinensis]
Length = 174
Score = 102 bits (253), Expect = 7e-20
Identities = 58/126 (46%), Positives = 76/126 (60%)
Frame = -1
Query: 378 PDIRLSKKSPN*NSRENKKMRNANNLEEESRDSNGAVLTAQQLVATVLAFSLLLCSAANG 199
P +RLS K +R+ +M+N L+ S+ A +A +L S + +
Sbjct: 13 PKLRLSTKG----NRKEAEMQNPAPLQ--SKQVKFVKSLAPPFMAAMLVLSPICHDPVSL 66
Query: 198 QEDGVRSRGGALFGQACIGCHDAGGNVIQPGSTLFAGDLERNGVATEEEIYEITCSGKGR 19
+ +G +LF QACIGCHD GGNVIQPG+TLF DL+RNGV TE+EIY +T GKGR
Sbjct: 67 AQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGR 126
Query: 18 MPGFGE 1
MPGFGE
Sbjct: 127 MPGFGE 132