BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00021871
         (1187 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAA69272.1| lectin receptor kinase [Arabidopsis thaliana]         396   e-108
emb|CAB75469.1| copia-type reverse transcriptase-like protein [A...   396   e-107
gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi...   395   e-107
emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]         394   e-107
gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thal...   394   e-107
gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana]             390   e-106
gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi...   357   7e-96
gb|ACN78973.1| copia-type polyprotein [Glycine max] gi|225016157...   356   9e-96
gb|AGW47867.1| polyprotein [Phaseolus vulgaris]                       335   3e-89
gb|AGH20679.1| reverse transcriptase, partial [Raphanus sativus]      319   2e-84
gb|AFK88542.1| reverse transcriptase, partial [Arabidopsis halle...   316   1e-83
gb|AGH20681.1| reverse transcriptase, partial [Raphanus sativus]      315   2e-83
gb|AFK88553.1| reverse transcriptase, partial [Arabidopsis halle...   315   2e-83
gb|AFK88544.1| reverse transcriptase, partial [Arabidopsis halle...   315   3e-83
gb|AGH20680.1| reverse transcriptase, partial [Raphanus sativus]      313   7e-83
gb|AFK88543.1| reverse transcriptase, partial [Arabidopsis halle...   313   9e-83
gb|AGH20673.1| reverse transcriptase, partial [Crucihimalaya wal...   313   1e-82
gb|AGH20676.1| reverse transcriptase, partial [Olimarabidopsis c...   312   2e-82
gb|AFK88551.1| reverse transcriptase, partial [Arabidopsis halle...   311   3e-82
gb|AFK88541.1| reverse transcriptase, partial [Arabidopsis halle...   311   3e-82

>emb|CAA69272.1| lectin receptor kinase [Arabidopsis thaliana]
          Length = 623

 Score =  396 bits (1018), Expect = e-108
 Identities = 199/397 (50%), Positives = 267/397 (67%), Gaps = 2/397 (0%)
 Frame = +2

Query: 2    LYDPESKKIIISRDVIFDEEGVWNFNSCRTDYNFFEL--EEQPQSTLHESTLQHYETXXX 175
            LY+P++KK IISR+++FDEEG W++NS   DYNFF    E++P+ T  E   +   T   
Sbjct: 231  LYNPDTKKTIISRNIVFDEEGEWDWNSNEEDYNFFPHFEEDKPEPTREEPPSEEPTTPPT 290

Query: 176  XXXXXXXXXXXXXXXXXXEGALRMRSLEEIYESTEQIEDLTLFCLFADCEPVQFEEAAQD 355
                              E   R RS++E+YE TE  E+LTLFCLFA+CEP+ F+EA + 
Sbjct: 291  SPTSSQIEESSS------ERTPRFRSIQELYEVTENQENLTLFCLFAECEPMDFQEAIEK 344

Query: 356  KKWRKAMDEEIESIEKNNTWELATLPRGHKAIGVKWVYKAKKNAKGEIEKYKARLVAKGY 535
            K WR AMDEEI+SI+KN+TWEL +LP GHKAIGVKWVYKAKKN+KGE+E+YKARLVAKGY
Sbjct: 345  KTWRNAMDEEIKSIQKNDTWELTSLPNGHKAIGVKWVYKAKKNSKGEVERYKARLVAKGY 404

Query: 536  SQRAGVDYDEVFAPVARLETIRLLISMAAQHQWKVHQMDVKSAFLNGILEEEVYVQQPTG 715
            SQRAG+DYDE+FAPVARLET+RL+IS+AAQ++WK+HQMDVKSAFLNG LEEEVY++QP G
Sbjct: 405  SQRAGIDYDEIFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQG 464

Query: 716  YEVSSQESKVLRLKKALYGLKQASRQWHSKLSEALLSQGFSQSPNDYSLFHKKTHDSVIF 895
            Y V  +E KVLRLKK LYGLKQA R W++++ +    + F + P +++L+ K   + ++ 
Sbjct: 465  YIVKGEEDKVLRLKKVLYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKIQKEDILI 524

Query: 896  IAVYVDDILVTGNDLPGITAIKSFLDAQFRIKDLGKLGYFLGIEFLHYAQGIILSQRKFI 1075
              +YVDD++ TGN+       K  +  +F + D+G + Y+LGIE      GI ++Q  + 
Sbjct: 525  ACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGYA 584

Query: 1076 LDVLQDFXXXXXXXXXXXXXXXIKLGLDYKEFLPDPT 1186
             +VL+ F               IKL    +    DPT
Sbjct: 585  KEVLKKFKMDDSNPVCTPMECGIKLSKKEEGEGVDPT 621


>emb|CAB75469.1| copia-type reverse transcriptase-like protein [Arabidopsis thaliana]
          Length = 1272

 Score =  396 bits (1017), Expect = e-107
 Identities = 193/367 (52%), Positives = 260/367 (70%), Gaps = 2/367 (0%)
 Frame = +2

Query: 2    LYDPESKKIIISRDVIFDEEGVWNFNSCRTDYNFFEL--EEQPQSTLHESTLQHYETXXX 175
            LY+P++KK IISR+++FDEEG W++NS   DYNFF    E++P+ T  E   +   T   
Sbjct: 734  LYNPDTKKTIISRNIVFDEEGEWDWNSNEEDYNFFPHFEEDKPEPTREEPPSEEPTTPPT 793

Query: 176  XXXXXXXXXXXXXXXXXXEGALRMRSLEEIYESTEQIEDLTLFCLFADCEPVQFEEAAQD 355
                              E   R RS++E+YE TE  E+LTLFCLFA+CEP+ F+EA + 
Sbjct: 794  SPTSSQIEESSS------ERTPRFRSIQELYEVTENQENLTLFCLFAECEPMDFQEAIEK 847

Query: 356  KKWRKAMDEEIESIEKNNTWELATLPRGHKAIGVKWVYKAKKNAKGEIEKYKARLVAKGY 535
            K WR AMDEEI+SI+KN+TWEL +LP GHKAIGVKWVYKAKKN+KGE+E+YKARLVAKGY
Sbjct: 848  KTWRNAMDEEIKSIQKNDTWELTSLPNGHKAIGVKWVYKAKKNSKGEVERYKARLVAKGY 907

Query: 536  SQRAGVDYDEVFAPVARLETIRLLISMAAQHQWKVHQMDVKSAFLNGILEEEVYVQQPTG 715
            SQRAG+DYDE+FAPVARLET+RL+IS+AAQ++WK+HQMDVKSAFLNG LEEEVY++QP G
Sbjct: 908  SQRAGIDYDEIFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQG 967

Query: 716  YEVSSQESKVLRLKKALYGLKQASRQWHSKLSEALLSQGFSQSPNDYSLFHKKTHDSVIF 895
            Y V  +E KVLRLKK LYGLKQA R W++++ +    + F + P +++L+ K   + ++ 
Sbjct: 968  YIVKGEEDKVLRLKKVLYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKIQKEDILI 1027

Query: 896  IAVYVDDILVTGNDLPGITAIKSFLDAQFRIKDLGKLGYFLGIEFLHYAQGIILSQRKFI 1075
              +YVDD++ TGN+       K  +  +F + D+G + Y+LGIE      GI ++Q  + 
Sbjct: 1028 ACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGYA 1087

Query: 1076 LDVLQDF 1096
             +VL+ F
Sbjct: 1088 KEVLKKF 1094


>gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana]
          Length = 1352

 Score =  395 bits (1014), Expect = e-107
 Identities = 199/397 (50%), Positives = 266/397 (67%), Gaps = 2/397 (0%)
 Frame = +2

Query: 2    LYDPESKKIIISRDVIFDEEGVWNFNSCRTDYNFFEL--EEQPQSTLHESTLQHYETXXX 175
            LY+P++KK IISR+++FDEEG W++NS   DYNFF    E++P+ T  E   +   T   
Sbjct: 734  LYNPDTKKTIISRNIVFDEEGEWDWNSNEEDYNFFPHFEEDEPEPTREEPPSEEPTTPPT 793

Query: 176  XXXXXXXXXXXXXXXXXXEGALRMRSLEEIYESTEQIEDLTLFCLFADCEPVQFEEAAQD 355
                              E   R RS++E+YE TE  E+LTLFCLFA+CEP+ F+EA + 
Sbjct: 794  SPTSSQIEESSS------ERTPRFRSIQELYEVTENQENLTLFCLFAECEPMDFQEAIEK 847

Query: 356  KKWRKAMDEEIESIEKNNTWELATLPRGHKAIGVKWVYKAKKNAKGEIEKYKARLVAKGY 535
            K WR AMDEEI+SI+KN+TWEL +LP GHK IGVKWVYKAKKN+KGE+E+YKARLVAKGY
Sbjct: 848  KTWRNAMDEEIKSIQKNDTWELTSLPNGHKTIGVKWVYKAKKNSKGEVERYKARLVAKGY 907

Query: 536  SQRAGVDYDEVFAPVARLETIRLLISMAAQHQWKVHQMDVKSAFLNGILEEEVYVQQPTG 715
             QRAG+DYDEVFAPVARLET+RL+IS+AAQ++WK+HQMDVKSAFLNG LEEEVY++QP G
Sbjct: 908  IQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQG 967

Query: 716  YEVSSQESKVLRLKKALYGLKQASRQWHSKLSEALLSQGFSQSPNDYSLFHKKTHDSVIF 895
            Y V  +E KVLRLKKALYGLKQA R W++++ +    + F + P +++L+ K   + ++ 
Sbjct: 968  YIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKIQKEDILI 1027

Query: 896  IAVYVDDILVTGNDLPGITAIKSFLDAQFRIKDLGKLGYFLGIEFLHYAQGIILSQRKFI 1075
              +YVDD++ TGN+       K  +  +F + D+G + Y+LGIE      GI ++Q  + 
Sbjct: 1028 ACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGYA 1087

Query: 1076 LDVLQDFXXXXXXXXXXXXXXXIKLGLDYKEFLPDPT 1186
             +VL+ F               IKL    +    DPT
Sbjct: 1088 KEVLKKFKMDDSNPVCTPMECGIKLSKKEEGEGVDPT 1124


>emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]
          Length = 1352

 Score =  394 bits (1011), Expect = e-107
 Identities = 198/397 (49%), Positives = 266/397 (67%), Gaps = 2/397 (0%)
 Frame = +2

Query: 2    LYDPESKKIIISRDVIFDEEGVWNFNSCRTDYNFFEL--EEQPQSTLHESTLQHYETXXX 175
            LY+P++KK IISR+++FDEEG W++NS   DYNFF    E++P+ T  E   +   T   
Sbjct: 734  LYNPDTKKTIISRNIVFDEEGEWDWNSNEEDYNFFPHFEEDEPEPTREEPPSEEPTTPPT 793

Query: 176  XXXXXXXXXXXXXXXXXXEGALRMRSLEEIYESTEQIEDLTLFCLFADCEPVQFEEAAQD 355
                              E   R RS++E+YE TE  E+LTLFCLFA+CEP+ F++A + 
Sbjct: 794  SPTSSQIEESSS------ERTPRFRSIQELYEVTENQENLTLFCLFAECEPMDFQKAIEK 847

Query: 356  KKWRKAMDEEIESIEKNNTWELATLPRGHKAIGVKWVYKAKKNAKGEIEKYKARLVAKGY 535
            K WR AMDEEI+SI+KN+TWEL +LP GHKAIGVKWVYKAKKN+KGE+E+YKARLVAKGY
Sbjct: 848  KTWRNAMDEEIKSIQKNDTWELTSLPNGHKAIGVKWVYKAKKNSKGEVERYKARLVAKGY 907

Query: 536  SQRAGVDYDEVFAPVARLETIRLLISMAAQHQWKVHQMDVKSAFLNGILEEEVYVQQPTG 715
            SQR G+DYDEVFAPVARLET+RL+IS+AAQ++WK+HQMDVKSAFLNG LEEEVY++QP G
Sbjct: 908  SQRVGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQG 967

Query: 716  YEVSSQESKVLRLKKALYGLKQASRQWHSKLSEALLSQGFSQSPNDYSLFHKKTHDSVIF 895
            Y V  +E KVLRLKK LYGLKQA R W++++ +    + F + P +++L+ K   + ++ 
Sbjct: 968  YIVKGEEDKVLRLKKVLYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKIQKEDILI 1027

Query: 896  IAVYVDDILVTGNDLPGITAIKSFLDAQFRIKDLGKLGYFLGIEFLHYAQGIILSQRKFI 1075
              +YVDD++ TGN+       K  +  +F + D+G + Y+LGIE      GI ++Q  + 
Sbjct: 1028 ACLYVDDLIFTGNNPSIFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGYA 1087

Query: 1076 LDVLQDFXXXXXXXXXXXXXXXIKLGLDYKEFLPDPT 1186
             +VL+ F               IKL    +    DPT
Sbjct: 1088 KEVLKKFKIDDSNPVCTPMECGIKLSKKEEGEGVDPT 1124


>gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thaliana]
          Length = 1352

 Score =  394 bits (1011), Expect = e-107
 Identities = 198/397 (49%), Positives = 266/397 (67%), Gaps = 2/397 (0%)
 Frame = +2

Query: 2    LYDPESKKIIISRDVIFDEEGVWNFNSCRTDYNFFEL--EEQPQSTLHESTLQHYETXXX 175
            LY+P++KK IISR+++FDEEG W++NS   DYNFF    E++P+ T  E   +   T   
Sbjct: 734  LYNPDTKKTIISRNIVFDEEGEWDWNSNEEDYNFFPHFEEDEPEPTREEPPSEEPTTPPT 793

Query: 176  XXXXXXXXXXXXXXXXXXEGALRMRSLEEIYESTEQIEDLTLFCLFADCEPVQFEEAAQD 355
                              E   R RS++E+YE TE  E+LTLFCLFA+CEP+ F++A + 
Sbjct: 794  SPTSSQIEESSS------ERTPRFRSIQELYEVTENQENLTLFCLFAECEPMDFQKAIEK 847

Query: 356  KKWRKAMDEEIESIEKNNTWELATLPRGHKAIGVKWVYKAKKNAKGEIEKYKARLVAKGY 535
            K WR AMDEEI+SI+KN+TWEL +LP GHKAIGVKWVYKAKKN+KGE+E+YKARLVAKGY
Sbjct: 848  KTWRNAMDEEIKSIQKNDTWELTSLPNGHKAIGVKWVYKAKKNSKGEVERYKARLVAKGY 907

Query: 536  SQRAGVDYDEVFAPVARLETIRLLISMAAQHQWKVHQMDVKSAFLNGILEEEVYVQQPTG 715
            SQR G+DYDEVFAPVARLET+RL+IS+AAQ++WK+HQMDVKSAFLNG LEEEVY++QP G
Sbjct: 908  SQRVGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQG 967

Query: 716  YEVSSQESKVLRLKKALYGLKQASRQWHSKLSEALLSQGFSQSPNDYSLFHKKTHDSVIF 895
            Y V  +E KVLRLKK LYGLKQA R W++++ +    + F + P +++L+ K   + ++ 
Sbjct: 968  YIVKGEEDKVLRLKKVLYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKIQKEDILI 1027

Query: 896  IAVYVDDILVTGNDLPGITAIKSFLDAQFRIKDLGKLGYFLGIEFLHYAQGIILSQRKFI 1075
              +YVDD++ TGN+       K  +  +F + D+G + Y+LGIE      GI ++Q  + 
Sbjct: 1028 ACLYVDDLIFTGNNPSIFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGYA 1087

Query: 1076 LDVLQDFXXXXXXXXXXXXXXXIKLGLDYKEFLPDPT 1186
             +VL+ F               IKL    +    DPT
Sbjct: 1088 KEVLKKFKMDDSNPVCTPMECGIKLSKKEEGEGVDPT 1124


>gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana]
          Length = 1291

 Score =  390 bits (1001), Expect = e-106
 Identities = 197/397 (49%), Positives = 264/397 (66%), Gaps = 2/397 (0%)
 Frame = +2

Query: 2    LYDPESKKIIISRDVIFDEEGVWNFNSCRTDYNFFEL--EEQPQSTLHESTLQHYETXXX 175
            LY+P++KK IISR+++FDEEG W++NS   DYNFF    E++P+ T  E   +   T   
Sbjct: 673  LYNPDTKKTIISRNIVFDEEGEWDWNSNEEDYNFFPHFEEDEPEPTREEPPSEEPTTRPT 732

Query: 176  XXXXXXXXXXXXXXXXXXEGALRMRSLEEIYESTEQIEDLTLFCLFADCEPVQFEEAAQD 355
                              E   R RS++E+YE TE  E+LTLFCLFA+CEP+ F+EA + 
Sbjct: 733  SLTSSQIEESSS------ERTPRFRSIQELYEVTENQENLTLFCLFAECEPMDFQEAIEK 786

Query: 356  KKWRKAMDEEIESIEKNNTWELATLPRGHKAIGVKWVYKAKKNAKGEIEKYKARLVAKGY 535
            K WR AMDEEI+SI+KN+TWEL +LP GHKAIGVKWVYKAKKN+KGE+E+YKARLVAKGY
Sbjct: 787  KTWRNAMDEEIKSIQKNDTWELTSLPNGHKAIGVKWVYKAKKNSKGEVERYKARLVAKGY 846

Query: 536  SQRAGVDYDEVFAPVARLETIRLLISMAAQHQWKVHQMDVKSAFLNGILEEEVYVQQPTG 715
            SQRAG+DYDEVFAPVARLET+RL+IS+AAQ++WK+HQMD K AFLNG  EEEVY++QP G
Sbjct: 847  SQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDFKLAFLNGDFEEEVYIEQPQG 906

Query: 716  YEVSSQESKVLRLKKALYGLKQASRQWHSKLSEALLSQGFSQSPNDYSLFHKKTHDSVIF 895
            Y V  +E KVLRLKKALYGLKQA R W++++ +    + F + P +++L+ K   + ++ 
Sbjct: 907  YIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKIQKEDILI 966

Query: 896  IAVYVDDILVTGNDLPGITAIKSFLDAQFRIKDLGKLGYFLGIEFLHYAQGIILSQRKFI 1075
              +YVDD++ TGN+       K  +  +F + D+G + Y+LGIE       I ++Q  + 
Sbjct: 967  ACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNRIFITQEGYA 1026

Query: 1076 LDVLQDFXXXXXXXXXXXXXXXIKLGLDYKEFLPDPT 1186
             +VL+ F               IKL    +    DPT
Sbjct: 1027 KEVLKKFKMDDSNPVCTPMECGIKLSKKEEGEGVDPT 1063


>gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana]
            gi|12321387|gb|AAG50765.1|AC079131_10 copia-type
            polyprotein, putative [Arabidopsis thaliana]
          Length = 1320

 Score =  357 bits (915), Expect = 7e-96
 Identities = 186/397 (46%), Positives = 251/397 (63%), Gaps = 2/397 (0%)
 Frame = +2

Query: 2    LYDPESKKIIISRDVIFDEEGVWNFNSCRTDYNFFEL--EEQPQSTLHESTLQHYETXXX 175
            LY+P++KK IISR+++FDEEG W++NS   DYNFF    E++P+ T  E   +   T   
Sbjct: 734  LYNPDTKKTIISRNIVFDEEGEWDWNSNEEDYNFFPHFEEDKPEPTREEPPSEEPTTPPT 793

Query: 176  XXXXXXXXXXXXXXXXXXEGALRMRSLEEIYESTEQIEDLTLFCLFADCEPVQFEEAAQD 355
                                            ++ QIE+         CEP+ F+EA + 
Sbjct: 794  SP------------------------------TSSQIEE--------KCEPMDFQEAIEK 815

Query: 356  KKWRKAMDEEIESIEKNNTWELATLPRGHKAIGVKWVYKAKKNAKGEIEKYKARLVAKGY 535
            K WR AMDEEI+SI+KN+TWEL +LP GHKAIGVKWVYKAKKN+KGE+E+YKARLVAKGY
Sbjct: 816  KTWRNAMDEEIKSIQKNDTWELTSLPNGHKAIGVKWVYKAKKNSKGEVERYKARLVAKGY 875

Query: 536  SQRAGVDYDEVFAPVARLETIRLLISMAAQHQWKVHQMDVKSAFLNGILEEEVYVQQPTG 715
            SQRAG+DYDEVFAPVARLET+RL+IS+AAQ++WK+HQMDVKSAFLNG LEEEVY++QP G
Sbjct: 876  SQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQG 935

Query: 716  YEVSSQESKVLRLKKALYGLKQASRQWHSKLSEALLSQGFSQSPNDYSLFHKKTHDSVIF 895
            Y V  +E KVLRLKKALYGLKQA R W++++ +    + F + P +++L+ K   + ++ 
Sbjct: 936  YIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKIQKEDILI 995

Query: 896  IAVYVDDILVTGNDLPGITAIKSFLDAQFRIKDLGKLGYFLGIEFLHYAQGIILSQRKFI 1075
              +YVDD++ TGN+       K  +  +F + D+G + Y+LGIE      GI ++Q  + 
Sbjct: 996  ACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGYA 1055

Query: 1076 LDVLQDFXXXXXXXXXXXXXXXIKLGLDYKEFLPDPT 1186
             +VL+ F               IKL    +    DPT
Sbjct: 1056 KEVLKKFKMDDSNPVCTPMECGIKLSKKEEGEGVDPT 1092


>gb|ACN78973.1| copia-type polyprotein [Glycine max] gi|225016157|gb|ACN78980.1|
            copia-type polyprotein [Glycine max]
          Length = 1042

 Score =  356 bits (914), Expect = 9e-96
 Identities = 180/366 (49%), Positives = 246/366 (67%), Gaps = 1/366 (0%)
 Frame = +2

Query: 2    LYDPESKKIIISRDVIFDEEGVWNFNSCRTDYNFFELEEQPQSTLHESTLQHYETXXXXX 181
            LY+P + K I+SRDV F EEG WN+      Y+FF   E+      E+   +  T     
Sbjct: 425  LYNPNNGKTIVSRDVEFYEEGTWNWEEKEDTYDFFPYFEEIDE---EALTPNDSTPALSP 481

Query: 182  XXXXXXXXXXXXXXXXEGALRMRSLEEIYESTEQIEDLTLFCLFADCEPVQFEEAAQDKK 361
                            E   RMR+++E+Y+ TE I DL  FCLF D +P+ F+EA +DK+
Sbjct: 482  TPSTNEASSSSEGSSSERPRRMRNIQELYDETEVINDL--FCLFVDSKPLNFDEAMKDKR 539

Query: 362  WRKAMDEEIESIEKNNTWELATLPRGHKAIGVKWVYKAKKNAKGEIEKYKARLVAKGYSQ 541
            WR+AM+EEI++IEKNNTWEL++LP+GH+AIGVKWV+K KKNAKGE+E++KARLVAKGY Q
Sbjct: 540  WRQAMEEEIKAIEKNNTWELSSLPKGHEAIGVKWVFKIKKNAKGEVERHKARLVAKGYKQ 599

Query: 542  RAGVDYDEVFAPVARLETIRLLISMAAQHQWKVHQMDVKSAFLNGILEEEVYVQQPTGYE 721
            +  VDYDEVFAPVAR+ETIRLLIS+AAQ +W++ Q DVKSAFLNG LEE+VYV+QP G+ 
Sbjct: 600  QYEVDYDEVFAPVARMETIRLLISLAAQMKWRIFQFDVKSAFLNGYLEEDVYVEQPMGFV 659

Query: 722  VSSQESKVLRLKKALYGLKQASRQWHSKLSEALLSQGFSQSPNDYSLFHKK-THDSVIFI 898
            +  QE KVL+L KALYGLKQA R W++ + +     GF    N+Y+L+ K   +  V+FI
Sbjct: 660  IEGQEGKVLKLNKALYGLKQAPRAWNTHIDKYFQDNGFVHCQNEYALYVKTFNNGDVLFI 719

Query: 899  AVYVDDILVTGNDLPGITAIKSFLDAQFRIKDLGKLGYFLGIEFLHYAQGIILSQRKFIL 1078
             +YVDD++ TGN+       K  +  +F + D+G + Y+LG+E      GI +SQ ++  
Sbjct: 720  CLYVDDLIFTGNNPNLFEDFKESMSREFDMTDMGLMSYYLGMEVKQTQNGIFVSQERYTK 779

Query: 1079 DVLQDF 1096
            +VL+ F
Sbjct: 780  EVLKKF 785


>gb|AGW47867.1| polyprotein [Phaseolus vulgaris]
          Length = 1471

 Score =  335 bits (858), Expect = 3e-89
 Identities = 168/365 (46%), Positives = 237/365 (64%)
 Frame = +2

Query: 2    LYDPESKKIIISRDVIFDEEGVWNFNSCRTDYNFFELEEQPQSTLHESTLQHYETXXXXX 181
            L DP SKK+ +SRDV  +E   W++N+  +     E+ E   ++++  T    +      
Sbjct: 755  LLDPISKKVTVSRDVQINEASEWDWNN--SSEVMIEVGESSPTSINSETTDDEDEPRQP- 811

Query: 182  XXXXXXXXXXXXXXXXEGALRMRSLEEIYESTEQIEDLTLFCLFADCEPVQFEEAAQDKK 361
                                ++RSL ++Y+ST ++    L CL AD E + FEEA +DKK
Sbjct: 812  --------------------KIRSLHDLYDSTNEVH---LVCLLADAENISFEEAVRDKK 848

Query: 362  WRKAMDEEIESIEKNNTWELATLPRGHKAIGVKWVYKAKKNAKGEIEKYKARLVAKGYSQ 541
            W+ AMDEEI++I++NNTWEL  LP G + IGVKW++K K NA+GEIE+YKARLVAKGY Q
Sbjct: 849  WQTAMDEEIKAIDRNNTWELTELPEGSQPIGVKWIFKKKMNAQGEIERYKARLVAKGYKQ 908

Query: 542  RAGVDYDEVFAPVARLETIRLLISMAAQHQWKVHQMDVKSAFLNGILEEEVYVQQPTGYE 721
            + G+DYDEVFAPV R+ETIRLLIS AAQ +W + QMDVKSAFLNG+LEEEVY++QP GY 
Sbjct: 909  KEGIDYDEVFAPVVRMETIRLLISQAAQFKWPIFQMDVKSAFLNGVLEEEVYIEQPPGYM 968

Query: 722  VSSQESKVLRLKKALYGLKQASRQWHSKLSEALLSQGFSQSPNDYSLFHKKTHDSVIFIA 901
               +E KVL+LKKALYGLKQA R W++++       GF Q P +++L+ K    ++IF+A
Sbjct: 969  KIGEEKKVLKLKKALYGLKQAPRAWNTRIDTYFKENGFKQCPYEHALYAKNNGGNMIFVA 1028

Query: 902  VYVDDILVTGNDLPGITAIKSFLDAQFRIKDLGKLGYFLGIEFLHYAQGIILSQRKFILD 1081
            +YVDD++  GN+   I   K  +  +F + DLG + +FLG+E      GI +SQ K+  +
Sbjct: 1029 LYVDDLIFMGNNNDMIEEFKGTMRREFEMTDLGLMKFFLGLEVRQKETGIFVSQEKYAKE 1088

Query: 1082 VLQDF 1096
            +L+ +
Sbjct: 1089 ILKKY 1093


>gb|AGH20679.1| reverse transcriptase, partial [Raphanus sativus]
          Length = 315

 Score =  319 bits (817), Expect = 2e-84
 Identities = 154/284 (54%), Positives = 204/284 (71%)
 Frame = +2

Query: 335  FEEAAQDKKWRKAMDEEIESIEKNNTWELATLPRGHKAIGVKWVYKAKKNAKGEIEKYKA 514
            FEEA + K WR AMDEEI+SI+KN+TWELA+LP GHKAIGVKWVYKAKKN+KGE+E+YKA
Sbjct: 2    FEEAQEKKSWRSAMDEEIKSIQKNDTWELASLPNGHKAIGVKWVYKAKKNSKGEVERYKA 61

Query: 515  RLVAKGYSQRAGVDYDEVFAPVARLETIRLLISMAAQHQWKVHQMDVKSAFLNGILEEEV 694
            RLVAKGYSQRAG+DYDEVFAPVARLET+RL+IS+AAQ  W++HQMDVKSAFLNG LEEEV
Sbjct: 62   RLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQKSWRIHQMDVKSAFLNGDLEEEV 121

Query: 695  YVQQPTGYEVSSQESKVLRLKKALYGLKQASRQWHSKLSEALLSQGFSQSPNDYSLFHKK 874
            Y++QP GY V  +E KVLRLKKALYGLKQA R W++++ +    +GF + P +++L+ K 
Sbjct: 122  YIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFNEKGFIKCPYEHALYIKT 181

Query: 875  THDSVIFIAVYVDDILVTGNDLPGITAIKSFLDAQFRIKDLGKLGYFLGIEFLHYAQGII 1054
             ++ ++   +YVDD++ TGN+       K  +  +F + D+G + Y+LGIE      GI 
Sbjct: 182  QNNDILIACLYVDDLIFTGNNPIMFEDFKKEMTKEFEMTDIGLMSYYLGIEVKQEENGIF 241

Query: 1055 LSQRKFILDVLQDFXXXXXXXXXXXXXXXIKLGLDYKEFLPDPT 1186
            ++Q  +  +VL+ F               +KL  + +    DPT
Sbjct: 242  ITQEGYAKEVLKKFKMDDSNPVCTPMECGVKLSKEEEGESVDPT 285


>gb|AFK88542.1| reverse transcriptase, partial [Arabidopsis halleri subsp. gemmifera]
            gi|389595484|gb|AFK88545.1| reverse transcriptase,
            partial [Arabidopsis halleri subsp. gemmifera]
          Length = 315

 Score =  316 bits (810), Expect = 1e-83
 Identities = 154/284 (54%), Positives = 204/284 (71%)
 Frame = +2

Query: 335  FEEAAQDKKWRKAMDEEIESIEKNNTWELATLPRGHKAIGVKWVYKAKKNAKGEIEKYKA 514
            F+EA + K WR AMDEEI++I+KN+TWELA+LP GHKAIGVKWVYKAKKN+KGE+E+YKA
Sbjct: 2    FQEAIEKKTWRNAMDEEIKAIKKNDTWELASLPNGHKAIGVKWVYKAKKNSKGEVERYKA 61

Query: 515  RLVAKGYSQRAGVDYDEVFAPVARLETIRLLISMAAQHQWKVHQMDVKSAFLNGILEEEV 694
            RLVAKGYSQRAG+DYDEVFAPVARLET+RL+IS+AAQ++WK+HQMDVKSAFLNG LEEEV
Sbjct: 62   RLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEV 121

Query: 695  YVQQPTGYEVSSQESKVLRLKKALYGLKQASRQWHSKLSEALLSQGFSQSPNDYSLFHKK 874
            Y++QP GY V  +E KVLRLKKALYGLKQA R W++++ +    + F + P +++L+ K 
Sbjct: 122  YIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKI 181

Query: 875  THDSVIFIAVYVDDILVTGNDLPGITAIKSFLDAQFRIKDLGKLGYFLGIEFLHYAQGII 1054
              D ++   +YVDD++ TGN+       K  +  +F + D+G + Y+LGIE      GI 
Sbjct: 182  QKDDILIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIF 241

Query: 1055 LSQRKFILDVLQDFXXXXXXXXXXXXXXXIKLGLDYKEFLPDPT 1186
            ++Q  +  +VL+ F               IKL  + +    DPT
Sbjct: 242  ITQEGYAKEVLKKFKMDDSNPVTTPMECGIKLSKNEEGEGVDPT 285


>gb|AGH20681.1| reverse transcriptase, partial [Raphanus sativus]
          Length = 315

 Score =  315 bits (808), Expect = 2e-83
 Identities = 153/284 (53%), Positives = 203/284 (71%)
 Frame = +2

Query: 335  FEEAAQDKKWRKAMDEEIESIEKNNTWELATLPRGHKAIGVKWVYKAKKNAKGEIEKYKA 514
            FEEA + K WR AMDEEI+SI+KN+TWELA+LP GHKAIGVKWVYKAKKN+KGE+E+YKA
Sbjct: 2    FEEAQEKKSWRSAMDEEIKSIQKNDTWELASLPNGHKAIGVKWVYKAKKNSKGEVERYKA 61

Query: 515  RLVAKGYSQRAGVDYDEVFAPVARLETIRLLISMAAQHQWKVHQMDVKSAFLNGILEEEV 694
            RLVAKGYSQRAG+DYDEVFAPVARLET+RL+IS+AAQ  WK+HQMDVKSAFLNG LEEEV
Sbjct: 62   RLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQKSWKIHQMDVKSAFLNGDLEEEV 121

Query: 695  YVQQPTGYEVSSQESKVLRLKKALYGLKQASRQWHSKLSEALLSQGFSQSPNDYSLFHKK 874
            Y++QP GY V  +E KVLRLKKALYGLKQA R W++++++    + F + P +++L+ K 
Sbjct: 122  YIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRINKYFKDKSFIKCPYEHALYIKT 181

Query: 875  THDSVIFIAVYVDDILVTGNDLPGITAIKSFLDAQFRIKDLGKLGYFLGIEFLHYAQGII 1054
             ++ ++   +YVDD++ TGN+       K  +  +F + D+G + Y LGI+      GI 
Sbjct: 182  QNNDILIACLYVDDLIFTGNNPIMFEDFKKEMTKEFEMTDIGLMSYHLGIKVKQEENGIF 241

Query: 1055 LSQRKFILDVLQDFXXXXXXXXXXXXXXXIKLGLDYKEFLPDPT 1186
            ++Q  +  +VL+ F               +KL  + +    DPT
Sbjct: 242  ITQEGYAKEVLKKFKMDDSNPVCTPMECGVKLSKEEEGESVDPT 285


>gb|AFK88553.1| reverse transcriptase, partial [Arabidopsis halleri subsp. gemmifera]
          Length = 315

 Score =  315 bits (808), Expect = 2e-83
 Identities = 154/284 (54%), Positives = 204/284 (71%)
 Frame = +2

Query: 335  FEEAAQDKKWRKAMDEEIESIEKNNTWELATLPRGHKAIGVKWVYKAKKNAKGEIEKYKA 514
            F+EA + K WR A DEEI++I+KN+TWELA+LP GHKAIGVKWVYKAKKN+KGE+E+YKA
Sbjct: 2    FQEAIEKKTWRNATDEEIKAIKKNDTWELASLPNGHKAIGVKWVYKAKKNSKGEVERYKA 61

Query: 515  RLVAKGYSQRAGVDYDEVFAPVARLETIRLLISMAAQHQWKVHQMDVKSAFLNGILEEEV 694
            RLVAKGYSQRAG+DYDEVFAPVARLET+RL+IS+AAQ++WK+HQMDVKSAFLNG LEEEV
Sbjct: 62   RLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEV 121

Query: 695  YVQQPTGYEVSSQESKVLRLKKALYGLKQASRQWHSKLSEALLSQGFSQSPNDYSLFHKK 874
            Y++QP GY V  +E KVLRLKKALYGLKQA R W++++++    + F + P +++L+ K 
Sbjct: 122  YIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRINKYFKKKDFIKCPYEHALYIKI 181

Query: 875  THDSVIFIAVYVDDILVTGNDLPGITAIKSFLDAQFRIKDLGKLGYFLGIEFLHYAQGII 1054
              D ++   +YVDD++ TGN+       K  +  +F + D+G + Y+LGIE      GI 
Sbjct: 182  QKDDILIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIF 241

Query: 1055 LSQRKFILDVLQDFXXXXXXXXXXXXXXXIKLGLDYKEFLPDPT 1186
            +SQ  +  +VL+ F               IKL  + +    DPT
Sbjct: 242  ISQEGYAKEVLKKFKMDDSNPVTTPMECGIKLSKNEEGEGVDPT 285


>gb|AFK88544.1| reverse transcriptase, partial [Arabidopsis halleri subsp. gemmifera]
          Length = 315

 Score =  315 bits (806), Expect = 3e-83
 Identities = 153/284 (53%), Positives = 203/284 (71%)
 Frame = +2

Query: 335  FEEAAQDKKWRKAMDEEIESIEKNNTWELATLPRGHKAIGVKWVYKAKKNAKGEIEKYKA 514
            F+EA +   WR AMDEEI++I+KN+TWELA+LP GHKAIGVKWVYKAKKN+KGE+E+YKA
Sbjct: 2    FQEAIEKNTWRNAMDEEIKAIKKNDTWELASLPNGHKAIGVKWVYKAKKNSKGEVERYKA 61

Query: 515  RLVAKGYSQRAGVDYDEVFAPVARLETIRLLISMAAQHQWKVHQMDVKSAFLNGILEEEV 694
            RLVAKGYSQRAG+DYDEVFAPVARLET+RL+IS+AAQ++WK+HQMDVKSAFLNG LEEEV
Sbjct: 62   RLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEV 121

Query: 695  YVQQPTGYEVSSQESKVLRLKKALYGLKQASRQWHSKLSEALLSQGFSQSPNDYSLFHKK 874
            Y++QP GY V  +E KVLRLKKALYGLKQA R W++++ +    + F + P +++L+ K 
Sbjct: 122  YIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRSWNTRIDKYFKEKDFIKCPYEHALYIKI 181

Query: 875  THDSVIFIAVYVDDILVTGNDLPGITAIKSFLDAQFRIKDLGKLGYFLGIEFLHYAQGII 1054
              D ++   +YVDD++ TGN+       K  +  +F + D+G + Y+LGIE      GI 
Sbjct: 182  QKDDILIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIF 241

Query: 1055 LSQRKFILDVLQDFXXXXXXXXXXXXXXXIKLGLDYKEFLPDPT 1186
            ++Q  +  +VL+ F               IKL  + +    DPT
Sbjct: 242  ITQEGYAKEVLKKFKVDDSNPVTTPIECGIKLSKNEEGEGVDPT 285


>gb|AGH20680.1| reverse transcriptase, partial [Raphanus sativus]
          Length = 315

 Score =  313 bits (803), Expect = 7e-83
 Identities = 152/284 (53%), Positives = 202/284 (71%)
 Frame = +2

Query: 335  FEEAAQDKKWRKAMDEEIESIEKNNTWELATLPRGHKAIGVKWVYKAKKNAKGEIEKYKA 514
            FEEA + K WR AMDEEI+SI+KN+TWELA+LP GHKAIGVKWVYKAK N+KGE+E+YKA
Sbjct: 2    FEEAQEKKSWRSAMDEEIKSIQKNDTWELASLPNGHKAIGVKWVYKAKNNSKGEVERYKA 61

Query: 515  RLVAKGYSQRAGVDYDEVFAPVARLETIRLLISMAAQHQWKVHQMDVKSAFLNGILEEEV 694
            RLVAKGYSQRAG+DYDEVFAPVARLET+RL+IS+AAQ  W++HQMDVKSAFLNG LEEEV
Sbjct: 62   RLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQKSWRIHQMDVKSAFLNGDLEEEV 121

Query: 695  YVQQPTGYEVSSQESKVLRLKKALYGLKQASRQWHSKLSEALLSQGFSQSPNDYSLFHKK 874
            Y++QP GY V  +E KVLRLKKAL GLKQA R W++++ +    +GF + P +++L+ K 
Sbjct: 122  YIEQPQGYIVKGEEDKVLRLKKALNGLKQAPRAWNTRIDKYFKEKGFIKCPYEHALYIKT 181

Query: 875  THDSVIFIAVYVDDILVTGNDLPGITAIKSFLDAQFRIKDLGKLGYFLGIEFLHYAQGII 1054
             ++ ++   +YVDD++ TGN+       K  +  +F + D+G + Y+LGIE      GI 
Sbjct: 182  QNNDILIACLYVDDLIFTGNNPIMFEDFKKEMTKEFEMTDIGLMSYYLGIEVKQEENGIF 241

Query: 1055 LSQRKFILDVLQDFXXXXXXXXXXXXXXXIKLGLDYKEFLPDPT 1186
            ++Q  +  +VL+ F               +KL  + +    DPT
Sbjct: 242  ITQEGYAKEVLKKFKMDDSNPVCTPMECGVKLSNEEEGESVDPT 285


>gb|AFK88543.1| reverse transcriptase, partial [Arabidopsis halleri subsp. gemmifera]
          Length = 315

 Score =  313 bits (802), Expect = 9e-83
 Identities = 153/284 (53%), Positives = 203/284 (71%)
 Frame = +2

Query: 335  FEEAAQDKKWRKAMDEEIESIEKNNTWELATLPRGHKAIGVKWVYKAKKNAKGEIEKYKA 514
            F+EA + K WR AMDEEI++I+KN+TWELA+LP GHKAIGVKWVYKAKKN+KGE+E+YKA
Sbjct: 2    FQEAIEKKTWRNAMDEEIKAIKKNDTWELASLPNGHKAIGVKWVYKAKKNSKGEVERYKA 61

Query: 515  RLVAKGYSQRAGVDYDEVFAPVARLETIRLLISMAAQHQWKVHQMDVKSAFLNGILEEEV 694
            RLVAKGYSQRAG+DYDEVFAPVARLET+RL+IS+AAQ++WK+HQMDVKSAFLNG LEEEV
Sbjct: 62   RLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEV 121

Query: 695  YVQQPTGYEVSSQESKVLRLKKALYGLKQASRQWHSKLSEALLSQGFSQSPNDYSLFHKK 874
            Y++QP GY V  +E KVLRLKKALYGLKQA R W++++ +    + F + P +++L+ K 
Sbjct: 122  YIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKI 181

Query: 875  THDSVIFIAVYVDDILVTGNDLPGITAIKSFLDAQFRIKDLGKLGYFLGIEFLHYAQGII 1054
              D ++   +YVDD++ TGN+       K  +  +F + D+G + Y+LGIE       I 
Sbjct: 182  QKDDILIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNRIF 241

Query: 1055 LSQRKFILDVLQDFXXXXXXXXXXXXXXXIKLGLDYKEFLPDPT 1186
            ++Q  +  +VL+ F               IKL  + +    DPT
Sbjct: 242  ITQEGYAKEVLKKFKMDDSNPVTTPMECGIKLSKNEEGEGVDPT 285


>gb|AGH20673.1| reverse transcriptase, partial [Crucihimalaya wallichii]
          Length = 315

 Score =  313 bits (801), Expect = 1e-82
 Identities = 147/254 (57%), Positives = 197/254 (77%)
 Frame = +2

Query: 335  FEEAAQDKKWRKAMDEEIESIEKNNTWELATLPRGHKAIGVKWVYKAKKNAKGEIEKYKA 514
            F+EA + K WRKAMDEEI++I+KN+TWELATLP GHKAIGVKWVYKAKKN+KGE+E+YKA
Sbjct: 2    FQEAIEKKTWRKAMDEEIKAIQKNDTWELATLPNGHKAIGVKWVYKAKKNSKGEVERYKA 61

Query: 515  RLVAKGYSQRAGVDYDEVFAPVARLETIRLLISMAAQHQWKVHQMDVKSAFLNGILEEEV 694
            RLVAKGYSQ+AG+DYDEVFAPVARLET+RL+IS+AAQ++WK+HQMDVKSAFLNG LEEEV
Sbjct: 62   RLVAKGYSQKAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEV 121

Query: 695  YVQQPTGYEVSSQESKVLRLKKALYGLKQASRQWHSKLSEALLSQGFSQSPNDYSLFHKK 874
            Y++QP GY V  +E KVLRLKK LYGLKQA R W++++ +    + F + P +++L+ K 
Sbjct: 122  YIEQPQGYIVKGEEDKVLRLKKTLYGLKQAPRAWNTRIDKYFKEKKFIKCPYEHALYIKI 181

Query: 875  THDSVIFIAVYVDDILVTGNDLPGITAIKSFLDAQFRIKDLGKLGYFLGIEFLHYAQGII 1054
             ++ ++   +YVDD++ TGN+       K  +  +F + D+G + Y+LGIE      GI 
Sbjct: 182  QNNDLLIACLYVDDLIFTGNNPNMFELFKMEMTKEFEMTDIGFMSYYLGIEVKQEDSGIF 241

Query: 1055 LSQRKFILDVLQDF 1096
            ++Q  +  +VL+ F
Sbjct: 242  ITQEGYAKEVLKKF 255


>gb|AGH20676.1| reverse transcriptase, partial [Olimarabidopsis cabulica]
          Length = 315

 Score =  312 bits (799), Expect = 2e-82
 Identities = 153/284 (53%), Positives = 202/284 (71%)
 Frame = +2

Query: 335  FEEAAQDKKWRKAMDEEIESIEKNNTWELATLPRGHKAIGVKWVYKAKKNAKGEIEKYKA 514
            F+EAA  K WR AMDEEI++I KN+TWELA+LP GHKAIGVKWVYKAKKN+KGE+E++KA
Sbjct: 2    FQEAAVKKTWRNAMDEEIKAIRKNDTWELASLPNGHKAIGVKWVYKAKKNSKGEVERHKA 61

Query: 515  RLVAKGYSQRAGVDYDEVFAPVARLETIRLLISMAAQHQWKVHQMDVKSAFLNGILEEEV 694
            RLVAKGYSQRAG+DYDEVFAPVARLET+RL+IS+AAQ+ WK+HQMDVKSAFLNG LEEEV
Sbjct: 62   RLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQNVWKIHQMDVKSAFLNGDLEEEV 121

Query: 695  YVQQPTGYEVSSQESKVLRLKKALYGLKQASRQWHSKLSEALLSQGFSQSPNDYSLFHKK 874
            Y++QP GY V  +E+KVL+LKKALYGLKQA R W++++ +    Q F + P +++L+ K 
Sbjct: 122  YIEQPQGYIVKGEEAKVLKLKKALYGLKQAPRAWNTRIDKYFKEQDFIKCPYEHALYIKI 181

Query: 875  THDSVIFIAVYVDDILVTGNDLPGITAIKSFLDAQFRIKDLGKLGYFLGIEFLHYAQGII 1054
              D ++   +YVDD++ TGN+       K  +  +F + D+G + Y+LGIE      GI 
Sbjct: 182  QKDDILIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMYYYLGIEVKQEDNGIF 241

Query: 1055 LSQRKFILDVLQDFXXXXXXXXXXXXXXXIKLGLDYKEFLPDPT 1186
            ++Q  +  +VL+ F               IK   + +    DPT
Sbjct: 242  ITQEGYAKEVLKKFKLDDSNPVSTPMECGIKFSKNEEGERVDPT 285


>gb|AFK88551.1| reverse transcriptase, partial [Arabidopsis halleri subsp. gemmifera]
          Length = 315

 Score =  311 bits (798), Expect = 3e-82
 Identities = 151/284 (53%), Positives = 204/284 (71%)
 Frame = +2

Query: 335  FEEAAQDKKWRKAMDEEIESIEKNNTWELATLPRGHKAIGVKWVYKAKKNAKGEIEKYKA 514
            F+EA + K WR AMDEEI++I+KN+TWELA+LP GH AIGVKWVYKAKKN+KGE+E+YKA
Sbjct: 2    FQEAIEKKTWRNAMDEEIKAIKKNDTWELASLPNGHNAIGVKWVYKAKKNSKGEVERYKA 61

Query: 515  RLVAKGYSQRAGVDYDEVFAPVARLETIRLLISMAAQHQWKVHQMDVKSAFLNGILEEEV 694
            RLVAKGYSQRAG+DYDEVFAPVA LET+RL+IS+AAQ++WK+HQMDVKSAFLNG LEEEV
Sbjct: 62   RLVAKGYSQRAGIDYDEVFAPVACLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEV 121

Query: 695  YVQQPTGYEVSSQESKVLRLKKALYGLKQASRQWHSKLSEALLSQGFSQSPNDYSLFHKK 874
            Y++QP GY V  +E+KVLRL KALYGLKQA R W++++ +    + F++ P +++L+ K 
Sbjct: 122  YIEQPQGYIVKGEENKVLRLNKALYGLKQAPRAWNTRIDKYFKEKDFTKCPYEHALYIKI 181

Query: 875  THDSVIFIAVYVDDILVTGNDLPGITAIKSFLDAQFRIKDLGKLGYFLGIEFLHYAQGII 1054
              D ++   +YVDD++ TGN+       K  +  +F++ D+G + Y+LGIE      GI 
Sbjct: 182  QKDDILIACLYVDDLIFTGNNPSMFEKFKKEMTKEFKMTDIGLMSYYLGIEVKQEDNGIF 241

Query: 1055 LSQRKFILDVLQDFXXXXXXXXXXXXXXXIKLGLDYKEFLPDPT 1186
            ++Q  +  +VL+ F               IKL  + +    DPT
Sbjct: 242  ITQEGYAKEVLKKFKMDDSNPVTTPMECGIKLSKNEEGEGVDPT 285


>gb|AFK88541.1| reverse transcriptase, partial [Arabidopsis halleri subsp. gemmifera]
          Length = 315

 Score =  311 bits (797), Expect = 3e-82
 Identities = 152/284 (53%), Positives = 202/284 (71%)
 Frame = +2

Query: 335  FEEAAQDKKWRKAMDEEIESIEKNNTWELATLPRGHKAIGVKWVYKAKKNAKGEIEKYKA 514
            F+EA + K WR AMDEEI++I+KN+TWELA+LP GHKAIGVKWVYKAKKN+KGE+E+YKA
Sbjct: 2    FQEAIEKKTWRNAMDEEIKAIKKNDTWELASLPNGHKAIGVKWVYKAKKNSKGEVERYKA 61

Query: 515  RLVAKGYSQRAGVDYDEVFAPVARLETIRLLISMAAQHQWKVHQMDVKSAFLNGILEEEV 694
            RLVAKGYSQRAG+DYDEVFAPVARLET+RL+I +AAQ++WK+HQMDVKSAFLNG LEEEV
Sbjct: 62   RLVAKGYSQRAGIDYDEVFAPVARLETVRLIILLAAQNKWKIHQMDVKSAFLNGDLEEEV 121

Query: 695  YVQQPTGYEVSSQESKVLRLKKALYGLKQASRQWHSKLSEALLSQGFSQSPNDYSLFHKK 874
            Y++QP GY V  +E KVLRLKKALYGLKQA R W++++ +    + F + P +++L+ K 
Sbjct: 122  YIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKI 181

Query: 875  THDSVIFIAVYVDDILVTGNDLPGITAIKSFLDAQFRIKDLGKLGYFLGIEFLHYAQGII 1054
              D ++   +YVDD++ TGN+       K  +  +F + D+G + Y+LGIE      GI 
Sbjct: 182  QKDGILIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIF 241

Query: 1055 LSQRKFILDVLQDFXXXXXXXXXXXXXXXIKLGLDYKEFLPDPT 1186
            ++Q  +  +V + F               IKL  + +    DPT
Sbjct: 242  ITQEGYAKEVHKKFKMDDSNPVTTPMECGIKLSKNEEGEGVDPT 285