BLASTX nr result

ID: Rheum21_contig00021748 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00021748
         (538 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006592863.1| PREDICTED: seed biotin-containing protein SB...    63   5e-08
ref|XP_006469129.1| PREDICTED: seed biotin-containing protein SB...    59   9e-07
ref|XP_006446761.1| hypothetical protein CICLE_v10014817mg [Citr...    56   6e-06
ref|XP_004243405.1| PREDICTED: seed biotin-containing protein SB...    56   6e-06
ref|XP_002325582.2| late embryogenesis abundant domain-containin...    55   8e-06

>ref|XP_006592863.1| PREDICTED: seed biotin-containing protein SBP65-like [Glycine max]
          Length = 540

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 46/145 (31%), Positives = 68/145 (46%), Gaps = 36/145 (24%)
 Frame = -3

Query: 524 VEDTAVSAGETVADFAAKKREEAKQDLEAKKR-----------QG------------QAP 414
           V+  A SAGET  ++  +K+EEA+++LEAKK            QG            + P
Sbjct: 339 VKGLAASAGETAKEYTTRKKEEAQRELEAKKAFQPQEAEERPSQGIGETVSSVGEKVKKP 398

Query: 413 LSNLAA----KEEKSSRTTQSGLSSER------TTNTTVTEKM---KGSSEMVETIVEEG 273
             N+      K+E       SG   E+       T T++ EK+   K   E+++ + E G
Sbjct: 399 FENILGGEGKKDESGGNDQSSGGGQEQGKSIIGQTLTSIGEKLGDAKQREELIDNVTEGG 458

Query: 272 GGVLGAIGETIAEIAQGVVAPPPIV 198
             VLGA+GET+ EI Q  + P  IV
Sbjct: 459 SEVLGAVGETVGEIGQNTMKPAEIV 483


>ref|XP_006469129.1| PREDICTED: seed biotin-containing protein SBP65-like [Citrus
           sinensis]
          Length = 546

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 45/124 (36%), Positives = 68/124 (54%), Gaps = 7/124 (5%)
 Frame = -3

Query: 521 EDTAVSAGETVADFAAKKREEAKQDLEAKKRQGQAPLSNLAAKEEKSSRTTQSGLSSERT 342
           +D AVS GET+ ++ A+K+EEA++++EAK+ + Q    +    EE+ S TT+     E  
Sbjct: 395 KDAAVSTGETMKEYTARKKEEAQREVEAKRGERQGTERSHTGGEER-SLTTEVHEKVEH- 452

Query: 341 TNTTVTEKMKGSSE-----MVETIVEEG--GGVLGAIGETIAEIAQGVVAPPPIVGPTSE 183
            +  + E  +G  E       E   ++G  GGVL AIGET+ EIAQ       +V    E
Sbjct: 453 VSMPIQETFQGGQERQGGRTTEYREDKGREGGVLQAIGETVVEIAQ---QTKDLVIGEGE 509

Query: 182 TEDK 171
           TE+K
Sbjct: 510 TEEK 513


>ref|XP_006446761.1| hypothetical protein CICLE_v10014817mg [Citrus clementina]
           gi|557549372|gb|ESR60001.1| hypothetical protein
           CICLE_v10014817mg [Citrus clementina]
          Length = 546

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 43/124 (34%), Positives = 67/124 (54%), Gaps = 7/124 (5%)
 Frame = -3

Query: 521 EDTAVSAGETVADFAAKKREEAKQDLEAKKRQGQAPLSNLAAKEEKSSRTTQSGLSSERT 342
           +D AVS GET+ ++  +K+EEA++++EAK+ + Q    +    +E+ S TT+     E  
Sbjct: 395 KDAAVSTGETMKEYTVRKKEEAQREVEAKRGERQGTERSHTGGDER-SLTTEVHEKVEH- 452

Query: 341 TNTTVTEKMKGSSE-----MVETIVEEG--GGVLGAIGETIAEIAQGVVAPPPIVGPTSE 183
            +  + E  +G  E       E   ++G  GGVL AIGET+ EIAQ       +V    E
Sbjct: 453 VSMPIQETFQGGQERQGGRTTEYREDKGREGGVLQAIGETVVEIAQ---QTKDLVIGEGE 509

Query: 182 TEDK 171
           TE+K
Sbjct: 510 TEEK 513


>ref|XP_004243405.1| PREDICTED: seed biotin-containing protein SBP65-like [Solanum
           lycopersicum]
          Length = 427

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 41/122 (33%), Positives = 61/122 (50%), Gaps = 3/122 (2%)
 Frame = -3

Query: 521 EDTAVSAGETVADFAAKKREEAKQDLEAKKRQGQAPLSNLAAKEEKSSRTTQSGLSSERT 342
           +D  VSA E+ A++AA+K+ EA+++LEAKK Q      N    +    +    G  S+  
Sbjct: 302 KDFVVSAEESAAEYAARKKAEAERELEAKKLQEDTKGENRGGPKIDEKK---RGFKSKEE 358

Query: 341 TNTTVTEKMKGSSEMVETIVEEGGGVLGAIGETIAEIAQ---GVVAPPPIVGPTSETEDK 171
           T  +  E+  G  +     VE    VL AIGETI EI +    +VA  P   P    E++
Sbjct: 359 TEESYLEEHGGGDKESSKPVEGAAVVLQAIGETIVEIGKTTTELVAGRPRDEPVEGIEEE 418

Query: 170 AT 165
           +T
Sbjct: 419 ST 420


>ref|XP_002325582.2| late embryogenesis abundant domain-containing family protein
           [Populus trichocarpa] gi|550317329|gb|EEE99963.2| late
           embryogenesis abundant domain-containing family protein
           [Populus trichocarpa]
          Length = 469

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 35/102 (34%), Positives = 53/102 (51%), Gaps = 3/102 (2%)
 Frame = -3

Query: 521 EDTAVSAGETVADFAAKKREEAKQDLEAKK-RQGQAPLSNLAAKEEKSSRTTQSGLSSER 345
           +DTA S GE++ ++ A+K+EEA++++EA+K  +GQ        +EE     T    + E 
Sbjct: 335 KDTAASTGESIKEYTARKKEEAEREIEARKAAEGQRSFQGGEFREESQVHATGGQGAEEG 394

Query: 344 TTNTTVTEKMKGSSEMV--ETIVEEGGGVLGAIGETIAEIAQ 225
                V  +     E        +EG  +LGAI ETI EIAQ
Sbjct: 395 NVTKKVAPEGDEQEEQYWRRQQRQEGSSLLGAITETIVEIAQ 436


Top